Pseudomonas atacamensis: JWU58_12680
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Entry
JWU58_12680 CDS
T07336
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pata
Pseudomonas atacamensis
Pathway
pata01501
beta-Lactam resistance
pata01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWU58_12680
01503 Cationic antimicrobial peptide (CAMP) resistance
JWU58_12680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_12680
01504 Antimicrobial resistance genes [BR:
pata01504
]
JWU58_12680
Transporters [BR:
pata02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JWU58_12680
Antimicrobial resistance genes [BR:
pata01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWU58_12680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
ParB_C
Motif
Other DBs
NCBI-ProteinID:
QSL90107
LinkDB
All DBs
Position
complement(2762641..2765739)
Genome browser
AA seq
1032 aa
AA seq
DB search
MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPDVAPPQIEIYAVYPGASAQTVDES
VVSLIEEELNGADHLLYFESQSSLGSATIKATFQPGTNPELAQVDVQNRLKVVESRLPQA
VNQQGLQVEKVSSGFLLLITLTSSDGKLDDVALSDYLARNVMNEIKRLDGVGKAQLYGAE
RAMRIWIDPQKLIAFNLTPADVNEAIVAQNAQVSAGSIGDLPSPSTQEITATILVKGQLS
TPQEFADIVLKANRDGSTVRIGDVARVEIGSQEYQFGTRLNGKPSTAVGVQLSPGANALN
TATLVRAKMDELARYFPAGVEYKIPYDTSPFVKVSITKVIYTLGEAMLLVFAVMFLFLQN
VRYTLIPTLVVPVALMGTFATMLALGFSINVLTMFGMVLAIGILVDDAIVVVENVERIMA
TDGLSPKEATRKAMTQITGAIIGITLVLVAVFIPMAFMQGSVGVIYQQFSLSMATSILFS
AFLALTLTPALCATLLKPVAKGEHHEKSGFFGWFNRRFEQLTDRYQGWVSYALKRTGRYL
MIYVVLLIGLGFSFARLPSSFLPTEDQGYTITDIQLPPGATKNRTVQVAEQLEAHNAGEP
GISDSVVILGFSFSGSGQNAALAFSTLKDWSERGSDDAASSIADRANAALSQIKDAMAFS
VLPPPVDGLGTSSGFEFRLQDRGGLGHATLMQARTELLAAAEKSPVLMNVRESALAEAPQ
VQLIVDRKQANALGVSFADIGNVLSTAVGSSYINDFPNQGRMQRVVVQAEGDQRSQVGDL
LKMHVRNNTGNMVPLSAFVQATWIQGPAQLTRYNGYPAIAISGEPSAGHSTGEAMAEIER
LVALGPKGLGQEWTGLSLQERLSGNQAPMLLGLSLLVVFLCLAALYESWSIPTSVLLVVP
LGVLGAVLAVTMRGMPNDVFFKVGLITIIGLSAKNAILIIEFAKSLYDEGHDLIDATLQA
ARLRLRPIVMTSLAFILGVVPLAIATGASSASQQAIGTGVIGGMITATLAVIFVPVFFVV
VMKLVQRFTKRH
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagttctttatcgaccgcccggtgtttgcctgggtggtcgccctgttcatcctg
ttggccggtgcgctggccattccgcagttgccggtcgcgcaatacccggacgttgcaccg
ccgcagatcgaaatctatgccgtctacccaggcgcctcggcgcagaccgtcgatgagagc
gtggtcagcctgatcgaggaagaactcaacggtgccgatcacctgctctacttcgaatcg
caaagcagcctgggcagcgcgacgatcaaggcgacgtttcagccgggcaccaacccggaa
ctggcgcaggtcgatgtgcagaaccgtctgaaggtggtcgagtcgcgcctgccgcaagcg
gtcaatcagcaaggcttgcaggtggagaaggtctcttccggtttcctcttgctgatcact
ttgacttccagcgacggcaagctcgatgacgtggccctcagcgattatctggcgcgcaat
gtgatgaacgaaatcaagcgcctggacggtgtcggcaaggcgcagttgtatggtgccgag
cgggcgatgcgcatctggatcgatccgcagaagctcatcgccttcaacctgacgccggcg
gatgtcaacgaagccatcgttgcgcagaacgcccaggtttcagcgggtagcatcggtgat
ctgccgtcgccttccacgcaggaaatcactgcgacgattctggtcaaaggccagttgtcg
acgccgcaggaattcgccgacatcgtgctcaaggccaatcgcgatggctccacggtgcgc
atcggtgatgtcgcgcgcgtggagatcggcagtcaggaatatcaattcggcacacgcctg
aacggcaagccgtccaccgccgtcggcgttcagctctctcccggcgccaacgcactgaac
accgcaacgctggtgcgggcgaagatggatgagctggcgcgctacttcccggccggcgtg
gagtacaagattccgtacgacacctcgcccttcgtcaaagtctcgatcaccaaagtgatc
tacacccttggcgaagcgatgctgctggtgtttgcggtgatgttcctgttcctgcaaaac
gtgcgctacacgctgattccgacactggtggtgccggtggcgttgatgggcactttcgcg
accatgctggcgctgggcttctcgatcaacgtgctgaccatgttcggcatggtgctggcc
atcggcattctggtggatgacgccatcgtcgtggtagagaacgtcgagaggatcatggcc
accgacggcctgtcgcccaaggaagccacgcgcaaggcgatgacgcagattaccggcgcg
attatcggcatcactctggtgctggtcgcggtgtttattccgatggcgttcatgcaaggc
tcggtcggcgtgatctaccaacagttctcgctgtccatggccacgtcgattctgttctcg
gcgtttctcgccctgacgttgacgccggcgttgtgcgcgaccttgctcaagcctgttgcc
aagggcgagcatcacgagaagtctggcttctttggctggttcaatcgtcgtttcgagcaa
ctgaccgatcgctatcagggttgggtcagctatgcgctcaagcgcactggtcgctacctg
atgatctacgtagtcctgttgattggacttgggttcagtttcgcgcgcctgccctcttcg
tttctgcctacagaagatcagggctacaccattaccgatatccagctgccgccgggcgcg
accaagaaccgcaccgtgcaagtagccgaacagctcgaagcgcacaacgccggtgagccg
ggaatcagtgacagcgtagtgatcctgggtttcagcttctccggtagcgggcagaatgcg
gcgctggcgttttcgacgctcaaggattggtcggaacgtggcagtgacgatgctgccagc
tcgattgccgatcgcgccaacgcggcgttgagtcagatcaaggacgccatggccttctcg
gtgctgccaccgcccgtggatggcctcggcacgtccagcggtttcgagttccgtttgcag
gatcgcggtggcctgggccacgcgacgttgatgcaggcgcgtacggaactgctcgccgcc
gccgagaaaagtccggtattgatgaacgtccgtgaaagcgcgctggccgaagcaccgcaa
gtgcaactgatcgtagaccgcaagcaggcgaatgccttaggcgtttcgttcgccgacatc
ggtaatgtgctgtccactgcggtgggttccagctacatcaacgacttccccaatcagggc
cgcatgcagcgcgtggtcgtgcaagccgaaggtgatcagcgcagtcaggtgggtgacttg
ctgaaaatgcacgtgcgcaacaacaccgggaacatggtgccgctgtccgcattcgtccag
gccacctggattcaaggcccggcgcagttgactcgttacaacggctatccggcgattgcc
atctctggcgaaccgtcggcggggcacagcaccggcgaagcgatggcggaaatcgagcga
ctggtagcgctggggccgaaaggtctgggtcaggaatggaccggtctgtcgttgcaggaa
cgcctgtcaggcaatcaggcgcctatgttgctcggtttgtcgcttctggtggtattcctg
tgtctggcggcgctgtatgagagctggtcgattccgacgtcggtactgctcgtcgtgccg
ctgggtgtgctcggcgcggtgctggcggtgacaatgcgcgggatgcctaacgacgtgttc
ttcaaggttggtctcatcaccatcatcggactgtcggcgaagaacgcgatcctcattatc
gaatttgccaagagcctgtatgacgaaggtcacgacctgatcgatgcaacgttgcaggct
gctcgcttgcgcttgcggccgatcgtgatgacctcgctggcgttcattctcggcgtggtg
ccattggccatcgccacgggtgccagctcggcgagtcagcaagcgatcggcactggcgtg
atcggcgggatgatcaccgctacgctggcagtcatcttcgtccccgtgttcttcgtcgtc
gtcatgaagctcgtacaacgattcaccaaacgacactga
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