Pseudomonas atacamensis: JWU58_12685
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Entry
JWU58_12685 CDS
T07336
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pata
Pseudomonas atacamensis
Pathway
pata01501
beta-Lactam resistance
pata01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JWU58_12685
01503 Cationic antimicrobial peptide (CAMP) resistance
JWU58_12685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pata03036
]
JWU58_12685
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pata02000
]
JWU58_12685
01504 Antimicrobial resistance genes [BR:
pata01504
]
JWU58_12685
Chromosome and associated proteins [BR:
pata03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JWU58_12685
Transporters [BR:
pata02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JWU58_12685
Antimicrobial resistance genes [BR:
pata01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JWU58_12685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QSL90108
LinkDB
All DBs
Position
complement(2765755..2766912)
Genome browser
AA seq
385 aa
AA seq
DB search
MSGKLLAWLGLIALALTLSACDSSSNAEEQTPPATVRVETIKAEPLSISSELSGRIAAPR
IAEVRARVAGVVLQRTYREGSDVKKGDVLFRIDPAPFKADLDSAEAALRKAEANAFQAKL
QEQRYAQLIEDQAISGQDYDNARAAARQTAADVAASKAALERAKLNLGYATVTAPISGRI
GRALVTEGALVGQNETTPLALIQQLNPIHADLTQSTRELNELRRAFRSGQLQEVGQDQVK
ATLIQDDGSLYPLPGKLLFSDITVDPGTGQIILRSEFPNPDLDLLPGSFIRVRLEQATIQ
NGITVPQRAVQRDSAGIAQVLTVDEQMRVAQQPVQLGAVQNNRWIVTGGLKPGDRIVIEG
LQHARPGEKVQVDETPLPLAQTTGQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaaactgctggcctggctcggcctgatcgcattggcgctgacgctgagcgct
tgtgattcatcctcgaacgccgaagagcagacgccgccggccaccgtgcgcgtagagacc
attaaagccgagcccctgtcgatcagcagcgaactgagcgggcgcatcgccgcgccacgg
attgccgaagtgcgtgcgcgagtggcgggcgtggtgttgcagcgcacctatcgcgaaggc
agcgacgtgaaaaaaggcgatgtgctgttccgcatcgacccggcgccgttcaaggccgat
ctggacagtgccgaagcggcgttgcgcaaggccgaggccaacgcctttcaggcgaaactg
caagaacaacgctatgcgcagttgatcgaggaccaggccatcagcggtcaggactacgac
aacgcccgcgccgctgcccggcagaccgccgctgatgtcgccgccagcaaggcagcgctg
gaacgggcgaaactgaacctcggttatgccaccgtgaccgcgccgatttccggccgcatc
ggccgcgcgctggtcaccgaaggtgcgctggtgggacagaacgaaaccacaccgctggcg
ctgattcagcagctcaacccgatccatgccgacctcacgcagtcgactcgcgagctcaat
gaactgcgccgggcgttccgttccgggcagttgcaagaagtcggtcaggaccaggtcaag
gccacactgattcaggatgacggcagcctgtatccattgcctggcaagctgctgttcagc
gacatcaccgttgatccgggcacaggccaaatcatcctgcgcagtgaattccccaatccg
gatctcgacctgctgccgggcagtttcatccgcgtacgccttgaacaggcaaccattcag
aacggcattaccgtgccgcaacgcgcggtgcagcgtgacagtgccggcattgcccaggtg
ctgaccgtcgatgagcagatgcgcgtggcgcagcaaccggtgcaactgggtgcggtgcag
aataatcgctggatcgtcaccggcggcctgaagcccggcgaccgcattgtcatcgaaggc
ctgcaacacgcccgtcccggagaaaaagtacaggtcgacgaaacccctcttccacttgcc
cagaccactggtcagtaa
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