Pseudomonas atacamensis: JWU58_18500
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Entry
JWU58_18500 CDS
T07336
Symbol
prpD
Name
(GenBank) 2-methylcitrate dehydratase
KO
K01720
2-methylcitrate dehydratase [EC:
4.2.1.79
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00640
Propanoate metabolism
pata01100
Metabolic pathways
pata01120
Microbial metabolism in diverse environments
pata01200
Carbon metabolism
Module
pata_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JWU58_18500 (prpD)
Enzymes [BR:
pata01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.79 2-methylcitrate dehydratase
JWU58_18500 (prpD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MmgE_PrpD_N
MmgE_PrpD_C
Motif
Other DBs
NCBI-ProteinID:
QSL86153
LinkDB
All DBs
Position
complement(4081152..4082636)
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AA seq
494 aa
AA seq
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MSANVDLNNRPDYDAVLQDIADYVLTFKPESAEALNTARNCLIDTLGCGLLALRFPECTK
HLGPIVEGTVVPFGARVPGTPYRLDPVKAAWDIGCIVRWLDYNDTWLAAEWGHPSDNLGA
ILAVADHLSQKRIANGEAPLTVRNVLEAMIMAHEIQGVIALENSFNRVGLDHVILVKVAS
TAVSARLMGANREQLLSALSHAFADGQALRTYRHAPNAGSRKSWAAGDAASRGVRLADIA
MRGEMGIPGVLTAKQWGFYDVSFSHTNNDLALKPTDKRAFSFSRPFGSYVMENVLFKISF
PAEFHAQTACEAAVTLHPLVRNRLHEIDRIVITTHESAIRIISKVGPLANAADRDHCLQY
MTAVPLAFGNLVAEHYEDDFHKAHPIIDVLREKMVIVEEPRFTREYLEPDKRSIANAVQV
FFKDGSSTDNVVVEYPIGHRRRRAEGIPLLEDKFKANLATRFAGQRCAEIFALCEDQAQL
EATSVHRFIDLFVI
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacgtcgacctgaacaaccgccccgattacgacgcagtcctgcaggacatc
gccgactacgtcctcaccttcaagcccgaatccgccgaagcgctgaacaccgcgcgcaac
tgcctgatcgacacgctgggctgcggcttgctggccctgcgtttccccgaatgcacgaaa
cacctcggcccgatcgttgaaggcacggttgtaccgttcggtgcacgagtgccaggtacc
ccttatcgcctcgatccggtcaaagccgcttgggatatcggctgcattgtccgctggctc
gactacaacgacacctggctcgccgccgaatgggggcatccatcggacaacctcggtgcc
atcctcgccgtggccgatcacctgtcacagaaacgcatcgctaacggtgaagcgccgctg
acggtccgcaatgtgctggaagcaatgatcatggcccacgagattcaaggcgtgatcgcc
ctggaaaactcctttaaccgggtaggactggatcacgtcattctggtgaaagtcgcctcg
accgccgtcagcgcccgactgatgggcgccaatcgcgagcagctgttgtcggcactgtcc
cacgccttcgccgacggtcaggcactgcgcacttatcggcatgcgccgaacgccggctcg
cgcaaatcctgggcggcgggggatgcggcgagtcgcggcgtaaggctggccgacatcgcc
atgcgcggtgagatgggcattcccggggttctgacggcaaagcagtggggtttttatgac
gtttcgttcagccacaccaacaacgatctggcgctgaaacccacggacaaacgcgctttc
agcttctcccggccgttcggcagttacgtgatggaaaacgtgctgttcaagatcagtttc
cccgccgaattccatgcgcagacggcatgcgaggcggcggtgaccttgcatccgctggtt
cgcaatcggctgcatgagatcgaccgcatcgtcatcaccacccatgaatcggcgatccgc
atcatttccaaggtcggcccgctggccaatgccgccgaccgcgaccactgcctgcaatac
atgaccgccgtgccgctggcatttggcaatctggtcgcggagcactacgaagacgacttc
cacaaggcgcatccgatcatcgatgtgctgcgcgaaaaaatggtcatcgttgaagaaccg
cgcttcacccgcgaataccttgagcctgacaaacgctcgattgccaacgccgtgcaggtg
tttttcaaggacggcagcagcaccgacaacgtcgtggtggagtacccgatcggccatcgc
cgccgccgcgccgagggcattccgttgctggaggacaagttcaaggccaacctggccacg
cggtttgccgggcagcgttgcgctgagatttttgcgctgtgcgaggatcaggcgcagctt
gaagccacgtcggtgcatcgattcatcgacctgtttgtgatctga
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