Pseudomonas atacamensis: JWU58_19600
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Entry
JWU58_19600 CDS
T07336
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pata
Pseudomonas atacamensis
Pathway
pata00020
Citrate cycle (TCA cycle)
pata00785
Lipoic acid metabolism
pata01100
Metabolic pathways
pata01110
Biosynthesis of secondary metabolites
pata01120
Microbial metabolism in diverse environments
pata01200
Carbon metabolism
pata01210
2-Oxocarboxylic acid metabolism
Module
pata_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pata_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pata00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JWU58_19600
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JWU58_19600
Enzymes [BR:
pata01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
JWU58_19600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
cwf21
Motif
Other DBs
NCBI-ProteinID:
QSL86358
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Position
complement(4301793..4304624)
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AA seq
943 aa
AA seq
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MQESVMQRMWNSAYLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGNSATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAQLDPLGLWQ
RPAPADLSINHYGLTNADLDTTFRAGDLFIGKEEASLREIHEALQQTYCRTIGAEFTHIT
DSEQRQWFQQRLESVRGRPTYSADIKSHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDELIQRSGSYGTKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKKVELGSGD
VKYHQGFSSNVMTTGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDLTGEKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDSRSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPSGTQPLMY
QQITKQRTTRELYADRLTQAGVLDAERVQAKVDEYRNALDNGLHVVKSLVKEPNKELFVD
WRPYLGHAWTARHDTRFDLKTLQELSAKLLEIPEGFVVQRQVAKIYEDRQKMQAGGLPIN
WGYAETMAYATLAFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDAGTYIPLQNLYDGQPRF
DLYDSFLSEEAVLAFEYGYSTTTPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCMPTTPAQIYHLLRRQVIRPLRKP
LVVLTPKSLLRHKLAISTLEDLAEGSFQTVIPEIDALDPKKVERVVLCSGKVYYDLLEKR
RAEGREDIAIVRIEQLYPFPEDDLKEVLAPYTNVKHAVWCQEEPMNQGAWYCSQHHLRRS
IANLDKTLVLEYAGREASAAPACGYASMHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtggaacagcgcctacctttcaggtggaaacgct
gcctatgtggaagagctttatgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacctactttcagaagttgccagccgacggcaactctgccactgatgtttcgcac
tcgacgattcgcgatcatttcgtgctgctggcaaagaaccagcgccgcgcccaaccggtt
tccgccggcagcgtgagcagtgagcacgagaagaagcaagttgaagtgctgcgattgatc
caggcctaccgtatgcgtggccaccaggcagcccagcttgacccgctggggctgtggcag
cgtcctgcacctgcagacctgtcgatcaatcattacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaagcgagcctacgcgaaatt
cacgaagcgttgcagcagacatattgccgcaccatcggcgctgaattcacgcacatcacc
gattccgagcagcgccagtggttccagcagcgtctggaaagcgtacgtggccgtccgacg
tactccgccgacatcaagagccacctgcttgagcgcgtgactgccggtgaaggcctggaa
aaatacctgggcaccaaatacccgggcaccaagcgtttcggtctggaaggtggcgaaagc
ctgattccgatgctcgacgaactgatccagcgttccggctcgtacggcaccaaggaagtc
gtcatcggcatggcccaccgtggccgtctgaacgtgctggtcaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagaaggtcgagctcggttccggtgac
gtcaaataccaccagggcttctcgtccaacgtgatgaccaccggcggtgaagttcacctg
gccatggcgttcaacccgtcccacctggaaatcgtttccccggtggtcgaaggttcggtg
cgcgcccgtcaggaccgtcgcaacgacctgaccggtgagaaggtactgccgatctccatc
cacggtgacgcggcatttgccggtcagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggtaccgtgcacatcgtgatcaacaaccaggtcggtttc
accatcagcaacccgctggactcgcgctccaccgagtacgccaccgacgttgccaagatg
atccaggcgccgatcctccatgtgaatggtgatgatccggaagccgtgctgttcgtgacc
caactggccatcgactaccgcatgcagttcaagcgtgacgtggtgatcgatctggtctgc
taccgtcgtcgcggccacaacgaggccgacgagccgagcggcacccagcccctgatgtat
cagcagatcaccaagcagcgcaccacccgtgagctgtacgctgatcgcctgacccaggcc
ggtgtgctcgacgctgaacgtgttcaggccaaggtcgacgaataccgcaacgcgctggac
aacggtctgcacgtggtgaaatcgctggtcaaagagccgaacaaagagctgttcgtcgac
tggcgtccgtacctgggccacgcctggactgcgcgtcacgacacgcgtttcgatctcaag
accctgcaagaactgtccgccaagctgctggaaattccggaaggcttcgtcgttcagcgt
caggtcgcgaagatctacgaagaccgtcagaagatgcaagccggcggcctgccgatcaac
tggggttacgccgaaaccatggcgtacgcgaccctggcgttcgaaggtcacccgattcgc
atgactggtcaggacatcggccgcggtacgttctcgcaccgtcacgctgtgttgcacaac
cagaaagacgcgggcacctacattccgctgcagaacctgtacgacggtcagccacgtttc
gacctgtacgactcgttcctctcggaagaagcggtactggcattcgaatacggttactcg
accaccacgccaaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gctcaggtcgtgatcgaccagttcatcaccagcggcgagcacaagtggggccgtctctgc
ggtctgaccatgctgctgccacacggttacgaaggtcagggccctgagcacagctcggct
cgtcttgagcgttacctgcagctgtgcgccgagcacaacattcaggtgtgcatgccgacc
acgccagcgcagatctaccacttgctgcgtcgtcaggtgatccgtccgctgcgcaagccg
ctggtcgtgctgacgccgaagtcgctgctgcgccacaagctggccatctcgacgctggaa
gatctggccgaaggttcgttccagaccgtgatcccggaaatcgacgcactggacccgaaa
aaggtcgagcgcgtggttctgtgcagcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggccgcgaagatatcgccatcgtgcgtatcgagcagctgtatccgttccct
gaggatgacttgaaagaagtcctggctccatacaccaacgtcaaacacgccgtttggtgt
caggaagagccgatgaaccagggtgcctggtactgcagccagcatcacttgcgtcgcagc
atcgccaacctcgacaagactctcgtacttgagtacgcgggccgtgaggcttcggctgcg
ccagcttgtggttacgcatcgatgcacgccgagcagcaggaaaaactgctgcaagatgct
ttcactgtttaa
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