Photobacterium atrarenae: NNL38_00195
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Entry
NNL38_00195 CDS
T10583
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pate Photobacterium atrarenae
Pathway
pate01501
beta-Lactam resistance
pate01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NNL38_00195
01503 Cationic antimicrobial peptide (CAMP) resistance
NNL38_00195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pate02000
]
NNL38_00195
01504 Antimicrobial resistance genes [BR:
pate01504
]
NNL38_00195
Transporters [BR:
pate02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NNL38_00195
Antimicrobial resistance genes [BR:
pate01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NNL38_00195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UTV27791
UniProt:
A0ABY5GG45
LinkDB
All DBs
Position
1:complement(38502..41621)
Genome browser
AA seq
1039 aa
AA seq
DB search
MRFTDVFIKRPVLAVSISFLIALLGLQAIFKMQVREYPDMTNTVVTVTTGYYGASADLIQ
GFITQPLEQAIAQADNIDFMTSSSVLGSSTITVTMKLNTDPNAALADILAKTNSVRSQLP
KEAEDPTVTMSTGSTTAVMYIGFTSDELASSQITDYMERVINPQFFTVNGVSKVDLYGGM
KYALRVWLDPAKMAAYNLTASDVMNVLNANNYQSATGQAIGEYVLYNGTAETQVTNTDDL
EKLVVSTQDGQVIRLGDIAKVTLEKSHDAYRASANGREAVVAAINATPSANPINIAADIR
ELLPELQRNMPSNIQMDILYDSTIAINESINEVIKTIAEAALIVLVVITLFLGSFRAVII
PIVTIPLSLIGVAMVMQSFGFSWNLMTLLAMVLAIGLVVDDAIVVLENVDRHIKLGESPF
RAAIIGTREIAVPVIAMTLTLGAVYAPIAMMGGITGSLFKEFALTLAGAVFVSGIVALTL
SPMMCSKMLKAHEKPSKFESSVHDFLDRMTNRYTKMLSGIMKMRPVVIVFAVIVFASLPM
LFRFIPSELAPAEDKGVLMLMGTAPSNANLDYIQNSMAQVNQMLADQPEVAFSQVFSGVP
ASNQAFGIASMVPWSEREASQAEVVERVTGLVKDVPEMAITAFQMPELPGAGSGLPLQFV
ITTPNHFESLFQVATDILADVKSNPMFVYSDLDLNYDSATMKIRIDKDKAGAYGVTMQDI
GITLSTMMADGYVNRIDLDGRSYEVIPQVERKYRLNPESLNGFYVRAADGKSIPLGSLVT
IDVIAEPRALPHFNQLNSATIGAVPAPGTAMGSAIDWFISDAAEKLPAGYQYDFMGESRQ
FVTEGNALFVTFGLALAIIFLVLAIQFESLRDPLVIMVSVPLAICGALIALSWGAASMNI
YSQVGLITLIGLITKHGILICEVAKEEQLHHQKDRMAAVMEAAKVRLRPILMTTAAMIAG
LIPLLYATGAGAAQRFSIGIVIVSGLAIGTLFTLFVLPVIYTYLASVHKPLPIFVEDKDL
EKLKRADEARNALKAQDVV
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttactgatgtttttattaaacgtcctgtcctggcagtctcgatcagttttctg
attgccctgctcggcctgcaagccattttcaaaatgcaggtacgagaatacccggacatg
accaatacggttgtcaccgtcacaaccggctactacggggccagtgctgacctgatccag
ggctttattacccagccgctggagcaggccattgcacaggccgataacatcgacttcatg
acctcatcttcggtgctgggaagctcgactatcacggtcaccatgaagctcaatacagat
ccgaatgccgccctggcggatattctggccaagaccaactcggtacgctcccaactgccg
aaagaggctgaggatccaaccgtcaccatgtcgaccggctcgacaacggcagtgatgtat
atcggctttaccagtgacgaactggcctcaagccagatcactgactacatggaacgagta
atcaacccgcagttcttcaccgtcaacggggtatccaaagtcgacttgtacggcggaatg
aaatatgccctgcgcgtctggttagacccggctaaaatggctgcttataacctgactgca
tcagacgtgatgaacgtcctgaatgccaacaattaccagtcggcgaccggtcaggcaatt
ggcgaatacgtactctataacggcaccgcagaaacccaggtgacgaacaccgatgatctg
gaaaagctggtcgtctcgacccaggatggccaggtgatccgcctcggcgacattgccaag
gtcaccctggagaaaagtcatgatgcctaccgggcttcagccaacggccgggaagctgtg
gtagctgcgattaatgcgacaccaagcgccaacccgatcaacatcgctgcggatatccgc
gaactgctacctgagctgcaacggaacatgccaagcaacatccagatggacatcctgtat
gactccaccatcgcgatcaatgagtcaatcaacgaggtaatcaagaccatcgccgaagca
gcgctgatcgttctggtggtgatcaccctgttcctcggctcattccgcgccgtgattatc
ccgattgttaccattccgctgtcgctgatcggcgttgccatggtgatgcagagcttcggt
ttctcctggaacctgatgaccctgctggcgatggtactggccatcggtttggtggtcgat
gatgcaatcgtggtactggaaaacgtcgaccgtcacatcaaactgggtgaatcaccgttc
cgggctgcgattataggcacccgggaaattgccgtaccggtgattgcgatgaccctgacc
ctgggtgcggtatatgcgccgattgcgatgatgggcgggatcaccggctccctgttcaag
gaatttgccctgaccctggccggtgcggtcttcgtctctgggattgtggccctgaccctg
tcgccgatgatgtgttcaaaaatgctcaaagcccatgaaaagccaagcaagtttgaatca
tccgtgcacgacttccttgatcgaatgaccaaccgctataccaagatgctgagcgggatc
atgaaaatgcgcccggtggtgattgtatttgcagtgatcgtatttgccagtctgccgatg
ttgttccgctttattccaagtgagctggcaccggcggaggacaaaggggtactgatgctg
atgggtaccgccccatccaatgccaacctggactacatccagaactccatggcccaggtc
aaccaaatgctggccgatcaaccggaagtggctttctcccaggttttctccggcgttcca
gcctccaaccaggcgtttggtatcgcctctatggtaccttggagtgagcgcgaagccagt
caggcggaagtagttgagcgcgtcaccgggctggtcaaagatgtgccggagatggcgatc
acagccttccagatgccggagctaccgggtgccggctcaggtctgccgctgcagttcgtc
atcaccacgccgaaccacttcgagagcctgttccaggtcgcaactgacattctggcggat
gtaaaaagcaacccgatgtttgtctactccgatttggatctgaactatgattcggcgacg
atgaagatccgcatcgacaaagacaaggccggtgcgtacggcgtcaccatgcaggatatc
gggatcaccctgagcaccatgatggcagatggctacgtcaaccggattgacctagacggc
cgctcctatgaagtgatcccgcaggtcgagcgcaagtaccgcctcaacccggaatctctg
aatggcttctatgttcgtgccgccgatggcaaatctattccgctgggcagccttgtgacc
atcgatgtcattgcggagccacgtgcactgccgcacttcaaccagctcaactcagcgacc
attggtgccgtaccagcaccaggcacggcaatgggctcggcgatcgactggttcatcagc
gatgccgcagagaaactaccggcaggttaccaatacgacttcatgggagagtcacgccag
ttcgttaccgaaggtaacgcactgttcgtcacctttggcttggcgctggcgatcatcttc
ctagtcctggcgatccagttcgagtccctgcgtgatccgctggtaattatggtctcggtg
ccgctggcaatctgtggcgcactgattgcgctgtcttggggcgcagcatcgatgaacatc
tactcacaagtcggtctcatcaccctaattggcctgatcaccaaacacggaatcctgatc
tgtgaggtcgccaaggaagagcagttgcatcatcaaaaagatcgcatggcggccgttatg
gaagcagccaaagtccgtctgcgtccgatcctgatgaccacggcagcgatgattgctggt
ctgatcccactgctgtacgccaccggcgccggggctgcgcagcgctttagtatcgggatc
gtgattgtctccggcctggcgattgggaccctgtttactctgttcgtcctgccggtgatt
tacacttatctggccagcgttcacaagccactgccaatttttgtcgaggacaaagatctg
gaaaagcttaagcgggctgacgaagcgcgtaatgcattgaaagcccaggacgttgtttaa
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