Photobacterium atrarenae: NNL38_14205
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Entry
NNL38_14205 CDS
T10583
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
pate Photobacterium atrarenae
Pathway
pate00020
Citrate cycle (TCA cycle)
pate00270
Cysteine and methionine metabolism
pate00620
Pyruvate metabolism
pate00630
Glyoxylate and dicarboxylate metabolism
pate00680
Methane metabolism
pate00710
Carbon fixation by Calvin cycle
pate00720
Other carbon fixation pathways
pate01100
Metabolic pathways
pate01110
Biosynthesis of secondary metabolites
pate01120
Microbial metabolism in diverse environments
pate01200
Carbon metabolism
Module
pate_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pate_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pate_M00012
Glyoxylate cycle
pate_M00168
CAM (Crassulacean acid metabolism), dark
pate_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NNL38_14205 (mdh)
00620 Pyruvate metabolism
NNL38_14205 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
NNL38_14205 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
NNL38_14205 (mdh)
00720 Other carbon fixation pathways
NNL38_14205 (mdh)
00680 Methane metabolism
NNL38_14205 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NNL38_14205 (mdh)
Enzymes [BR:
pate01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
NNL38_14205 (mdh)
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
DUF5848
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
UTV27454
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All DBs
Position
1:complement(3076128..3077066)
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AA seq
312 aa
AA seq
DB search
MKVAVIGAAGGIGQALALLLKNRLPAGSDLALYDIAPVTPGVAADLSHIPTPVSIKGYGG
EDPTPALEGADVVLISAGVARKPGMDRADLFNVNAGIVKSLAEKIAVVCPNAVVGIITNP
VNTTVAIAADVLKKAGVYDKRKLFGVTTLDVIRSETFVAELKDLDPGQVRVPVIGGHSGV
TILPLLSQVEGVEFTEEEIKALTPRIQNAGTEVVEAKAGGGSATLSMGQAACRFGLSVVR
ALQGEQGVVECAYVEGDGQHARFFAQPVLLGKDGVEEIMDYGKLSAFEQEALESMLDTLK
GDIAKGEEFAAK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgctgtgattggcgctgctggcggtatcggccaggccctggccctgctattg
aaaaaccgtctgcctgccggctctgacctggcgctgtatgacatcgcaccggtaacccct
ggggttgcggctgatctgagccatatcccgacgccggtttcgatcaaaggttacggtggt
gaagatccaacgccggccctggaaggcgcggatgtggtgctgatctctgccggtgtggcg
cgtaaaccgggtatggatcgtgcggatctgttcaatgtgaatgctgggatcgtcaaatca
ctggctgagaagatcgctgtggtttgcccgaatgctgtggtcgggattattaccaaccca
gtgaacacgacggttgcgattgctgctgatgttctgaaaaaagccggcgtttacgacaag
cgtaaactgttcggtgtcaccacgctggatgtgatccgttctgagacgttcgtcgctgag
ctgaaagatctggatccgggccaggtacgcgtgccggtgatcggcggtcactcaggtgtc
acgattctgccgctgctgtctcaggtggagggtgttgagttcactgaggaagaaatcaag
gcgctgacgccacgcattcagaatgcggggaccgaagtggttgaagccaaagctggtggc
ggatctgcaacgctgtcgatgggtcaggcggcttgtcgctttggtctgtctgtggttcgc
gcgctgcaaggcgagcagggcgtggttgagtgcgcttacgtggaaggcgacggtcagcac
gcgcgcttctttgcacagccggttctgctgggtaaagacggcgtagaagagatcatggat
tacggcaagctgagtgcgtttgaacaagaagcactggaaagcatgctcgatacgctgaaa
ggcgatattgccaaaggcgaagagttcgcagcgaaataa
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