Photobacterium atrarenae: NNL38_24190
Help
Entry
NNL38_24190 CDS
T10583
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pate Photobacterium atrarenae
Pathway
pate01501
beta-Lactam resistance
pate01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pate00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NNL38_24190
01503 Cationic antimicrobial peptide (CAMP) resistance
NNL38_24190
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pate02000
]
NNL38_24190
01504 Antimicrobial resistance genes [BR:
pate01504
]
NNL38_24190
Transporters [BR:
pate02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NNL38_24190
Antimicrobial resistance genes [BR:
pate01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NNL38_24190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
HSP90
Motif
Other DBs
NCBI-ProteinID:
UTV30092
LinkDB
All DBs
Position
2:complement(1837929..1841081)
Genome browser
AA seq
1050 aa
AA seq
DB search
MLSRFFIQRPKFALVLSIILTLAGAIALVNLPIAEYPKISPPSVSVTAYYSGASAEVVEE
AVADPIEASVNGVEGMIYMSSKSANDGSYNLNVTFDVDVDPDVAQVNVQNRVSQIESKLP
EEVRMVGVTVKKRSPDLLMVLNFYSPDGKYDDQFLINYINLNVKDQLARVNGISEVNVIG
GGEYAMRVWLDPERMANLGLTTSDINRALAEQNVQVAAGKVGGPPFNNVQEVQFSLVTKG
RLESVQEFENIVVRANSDGSVVYLKDVARVELGKKFYDGNGKFRGQPASIVALSLQSDAN
ALESGEAVMALLEKLKVNMPDGMAYETSYDTTLFVAESIKGVVKTLIEAILLVIAVTYLF
LGSARSTLIPVVAIPVSLVGTFAFMLMTGFTINTVTLFGLILAIGIVVDDAILVIENVDT
NMQRDPSLTPRKATLIAMKEVTGPIITSTLVLLAVFLPVAMLPGITGIMYRQFALTICIS
VVISSINALTLSPALCSLVLKQGGQNTSRWFQSFNKAFDDITVKYGALAGFLVRKASVLL
LVFVAALAAVGYLSKTTSTAFVPQEDKGIMLVNVQLPDAASLSRTEQTTLKLEQMIADEP
AVEGVTVANGYAFLTGAAASNGASMFVKLKDWEARQALEGDHSSFAITQRINARAAVEVP
EAIVFAMGPPAVPGMGPASGFEFVLEDSLGRDRTELAKVMNELIQKANAQPEIQYTFSMF
RANVPHFYVDVDRVKAKQLGIPLTEIFQTLQGNLGSMYINDFTMFGKNFRVTVQADSQYR
SDLDSLERFHVRSAGGKMIPLSTLVSVEQVFEPDVAWRYNMYRAAIIQGSPAPGYASGDA
IAAMERVAAEVLPQGYQYEWTGMAYQEVAAGNQAIYAFALALIFIYLFMVAQYESWGIPL
AIILVVPVATLGSFLALAATGTPLNLYAQIGLVLLIALAAKNAILIVEFAKNEREEQDLS
IDKASVRGGILRFRAVNMTSWSFILGVLPLVFASGAGHISQNSLGVSLTGGLLCVLLAGT
LLIPGFYAFVQRRREKFHGGSTKLEVLDEV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctgagtcgattttttatccagcgtccgaaattcgcgctggtgctgtccatcattctg
acccttgccggtgcaattgcgctggtgaacctgccaatcgcggaatatcccaagattagt
ccaccttcagtcagtgtgacggcttattattcgggcgcaagtgccgaggttgttgaagag
gcggttgccgatccgatcgaagcgtcggtcaatggcgtggaagggatgatctacatgtct
tccaagagtgccaatgatggttcctataacctgaatgtgaccttcgatgtcgatgtggat
ccggacgtggcgcaggtgaacgttcagaaccgggtttctcagatagaatccaagctgccg
gaagaagttcgtatggtcggcgtcacggtgaaaaaacgctcgccggacttgctgatggtg
ctgaacttctattctccagatggtaagtatgatgatcagttcctgatcaactacatcaac
ctgaatgtcaaagatcaactggcccgggtcaacgggatcagtgaagtgaatgtgatcggt
ggcggtgagtacgcgatgcgagtctggctggacccggagcggatggcgaacctgggcctg
acaacctcggatattaatcgggcactggcggagcagaacgttcaggttgctgccggtaaa
gtcggagggccaccgtttaacaatgttcaggaagttcagttcagcctcgtcaccaagggg
cgtctggaatccgttcaggagtttgagaacattgtggttcgtgcgaactcagacggaagt
gtggtttacctcaaagatgtagcccgtgtggaattgggtaagaagttctatgacggtaac
ggtaaattccgcggtcagccagcttcgattgtcgcgctgtcactacaatcagatgccaac
gcactggaaagcggtgaagccgttatggcgctgctggagaagctgaaagtcaatatgccg
gatggcatggcctatgaaaccagctacgacacaaccttatttgttgccgaatcgattaaa
ggggtggtgaagaccctgattgaagccatcttactggtgatcgcggtgacgtacctgttt
ctgggcagcgcacgctcgaccttaatcccggtcgtcgcgatccctgtctctttggttggt
acctttgccttcatgctgatgactggttttaccatcaataccgtgactttgtttggtctg
atcctggcgattggtattgtggtggatgatgcgattttggtgatcgaaaatgttgatacc
aatatgcagcgcgatccgagcctgacgccacgcaaggcgactttgattgcgatgaaagaa
gtcaccggaccgattatcacctcaaccttggttctgctggcggtgttcctgccggtggca
atgttgccggggatcaccgggatcatgtatcgtcagtttgcgttaaccatctgtatttca
gtggtgatttcatcaattaacgccctgacattgtctccggcgctgtgttcgctggtgctc
aagcaaggagggcaaaatacctcccgctggttccagagctttaacaaggcatttgacgac
attacagtgaaatacggcgcactggctggcttcctggtgcgaaaagcgagtgtgctgttg
ttggtctttgtggcggcattggcggcggttggatatctgtcgaagacgacgtcaacggct
tttgtacctcaggaagacaaaggcattatgctggtgaatgttcagttaccggatgcggca
tcgctgtcgcgaactgagcaaacgaccctgaaactggagcagatgattgccgatgagccg
gcggtggaaggggtgacggttgccaatggttacgcattcctgactggcgcagctgcttcc
aacggggcctcaatgtttgtgaaacttaaagattgggaagctcgccaggcgctggaaggg
gatcattcttcgttcgcaattacgcaacgtattaatgctcgtgcagcggtggaagtaccg
gaagcgatcgtctttgccatgggaccgccggcggttcccggcatgggaccggcctcgggg
tttgaattcgtgctggaagacagtctgggccgtgaccggaccgagctggcgaaggtgatg
aatgagctgatccaaaaggcgaatgcgcagcctgagatccagtataccttcagcatgttc
cgggccaatgtgccgcatttctatgtggacgtggatcgggtcaaagccaagcagctgggg
atcccgctgacagagattttccagacgctacagggtaacctgggttcgatgtacatcaat
gattttacgatgttcggcaagaacttccgggtgaccgttcaggctgacagccagtatcgc
agcgatttggattcgctggagcgttttcatgttcgctctgccggcggcaagatgatcccg
ctcagcaccctggtgtcagtggagcaggtcttcgagccggatgttgcatggcgttacaat
atgtatcgcgcggcgatcattcaaggcagcccggcaccgggttacgccagtggtgatgcg
attgcagcgatggagcgggttgcggcagaagtcttaccccagggttatcagtatgagtgg
accggcatggcttatcaggaagttgccgcggggaatcaggcaatttacgcgttcgcactt
gccctgatctttatctacctgttcatggtggcgcaatatgaaagctgggggatcccactg
gcgattattctggtggtgccagtggcaaccttggggtcgttcctggctttggctgccacc
ggaacaccgctgaatttgtatgctcagattggtctggtattgttgatagcactggcggcg
aagaatgccatcctgattgtggaattcgccaagaatgagcgcgaagagcaagatctatcg
attgataaggcatccgtacgcggcgggatcctgcgattccgtgcggttaacatgacatcc
tggtcgttcatactgggagttctgccactggtctttgcctctggagcgggtcacatcagt
cagaactcgctgggtgtgtcacttaccggggggctgttgtgcgtgttgctggcagggact
ttgctgatccccggcttctacgcttttgttcagcgtcggcgggaaaaatttcatggtggc
tcgacaaaactcgaagtactcgatgaggtgtga
DBGET
integrated database retrieval system
