KEGG   PATHWAY: aagg02010
Entry
aagg02010                   Pathway                                
Name
ABC transporters - Anatilimnocola aggregata
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
aagg02010  ABC transporters
aagg02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Anatilimnocola aggregata [GN:aagg]
Gene
ETAA8_47090  sbp; Sulfate-binding protein precursor [KO:K23163]
ETAA8_47100  cysT; Sulfate transport system permease protein CysT [KO:K02046]
ETAA8_47110  cysW_2; Sulfate transport system permease protein CysW [KO:K02047]
ETAA8_47120  cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA [KO:K02045] [EC:7.3.2.3]
ETAA8_53970  hypothetical protein [KO:K05772]
ETAA8_08180  nrtA; Nitrate transport protein NrtA precursor [KO:K15576]
ETAA8_08170  cmpB; Bicarbonate transport system permease protein CmpB [KO:K15577]
ETAA8_08160  cmpD_2; Bicarbonate transport ATP-binding protein CmpD [KO:K15578] [EC:7.3.2.4]
ETAA8_08150  cmpD_1; Bicarbonate transport ATP-binding protein CmpD [KO:K15579]
ETAA8_32090  Putative binding protein precursor [KO:K02020]
ETAA8_53960  modA; Molybdate-binding periplasmic protein precursor [KO:K02020]
ETAA8_32080  cysW_1; Sulfate transport system permease protein CysW [KO:K02018]
ETAA8_53950  modB; Molybdenum transport system permease protein ModB [KO:K02018]
ETAA8_32070  cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA [KO:K02017] [EC:7.3.2.5]
ETAA8_53940  cysA_3; Sulfate/thiosulfate import ATP-binding protein CysA [KO:K02017] [EC:7.3.2.5]
ETAA8_67440  putative binding protein component of ABC iron transporter precursor [KO:K02012]
ETAA8_61490  spermidine/putrescine ABC transporter membrane protein [KO:K02011]
ETAA8_06270  opuBB; Choline transport system permease protein OpuBB [KO:K05845 K05846]
ETAA8_06280  opuBA; Choline transport ATP-binding protein OpuBA [KO:K05847] [EC:7.6.2.9]
ETAA8_02530  ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
ETAA8_13670  mce related protein [KO:K02067]
ETAA8_13650  mlaE; ABC transport permease subunit MlaE [KO:K02066]
ETAA8_13660  putative ABC transporter ATP-binding protein [KO:K02065]
ETAA8_44890  rbsB; D-ribose-binding periplasmic protein precursor [KO:K10439]
ETAA8_48330  D-allose transporter subunit [KO:K10439]
ETAA8_48320  rbsC_2; Ribose transport system permease protein RbsC [KO:K10440]
ETAA8_44880  rbsC_1; Ribose transport system permease protein RbsC [KO:K10440]
ETAA8_48310  rbsA; Ribose import ATP-binding protein RbsA [KO:K10441] [EC:7.5.2.7]
ETAA8_37020  pstS; Phosphate-binding protein PstS precursor [KO:K02040]
ETAA8_37030  pstC; Phosphate transport system permease protein PstC [KO:K02037]
ETAA8_37040  pstA; Phosphate transport system permease protein PstA [KO:K02038]
ETAA8_23370  pstB3; Phosphate import ATP-binding protein PstB 3 [KO:K02036] [EC:7.3.2.1]
ETAA8_37050  pstB; Phosphate import ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
ETAA8_70330  phnD; Phosphate-import protein PhnD precursor [KO:K02044]
ETAA8_19600  oppA; Oligopeptide-binding protein OppA precursor [KO:K15580]
ETAA8_19610  dppB_1; Dipeptide transport system permease protein DppB [KO:K15581]
ETAA8_19620  dppC; Dipeptide transport system permease protein DppC [KO:K15582]
ETAA8_15480  oppD; Oligopeptide transport ATP-binding protein OppD [KO:K15583]
ETAA8_15490  oppF; Oligopeptide transport ATP-binding protein OppF [KO:K10823]
ETAA8_27260  troA; Periplasmic zinc-binding protein TroA precursor [KO:K11707]
ETAA8_27240  mntB_2; Manganese transport system membrane protein MntB [KO:K11708]
ETAA8_27230  mntB_1; Manganese transport system membrane protein MntB [KO:K11709]
ETAA8_27250  znuC; High-affinity zinc uptake system ATP-binding protein ZnuC [KO:K11710] [EC:7.2.2.5]
ETAA8_42960  ABC-2 family transporter protein [KO:K09696]
ETAA8_63330  ABC-2 family transporter protein [KO:K09696]
ETAA8_42970  drrA_2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA [KO:K09697] [EC:7.2.2.4]
ETAA8_63340  ybhF_7; putative ABC transporter ATP-binding protein YbhF [KO:K09697] [EC:7.2.2.4]
ETAA8_19440  lolE; Lipoprotein-releasing system transmembrane protein LolE [KO:K09808]
ETAA8_19430  P-loop containing nucleoside triphosphate hydrolase [KO:K09810] [EC:7.6.2.-]
ETAA8_08690  lolD_1; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810] [EC:7.6.2.-]
ETAA8_12400  lolD_3; Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810] [EC:7.6.2.-]
ETAA8_37270  putative permease YjgP/YjgQ family protein [KO:K07091]
ETAA8_60310  putative permease YjgP/YjgQ family protein [KO:K11720]
ETAA8_49080  lptB; Lipopolysaccharide export system ATP-binding protein LptB [KO:K06861] [EC:7.5.2.5]
ETAA8_49460  Putative multidrug export ATP-binding/permease protein [KO:K11085] [EC:7.5.2.6]
ETAA8_61450  putative ABC transporter ATP-binding protein [KO:K18889]
ETAA8_62750  putative ABC transporter ATP-binding protein [KO:K18890]
ETAA8_18520  macB_1; Macrolide export ATP-binding/permease protein MacB [KO:K05685] [EC:7.6.2.-]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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