PATHWAY: apal02010 Help
Entry
Name
ABC transporters - Alteracholeplasma palmae
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Alteracholeplasma palmae [GN:
apal ]
Gene
BN85410820 potD; putative ABC-type spermidine/putescine transport system, binding component [KO:K11069 K11070 ]
BN85410760 potD; similar to spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [KO:K11069 ]
BN85410770 potC; similar to spermidine/putrescine ABC transporter, spermidine/putrescine-binding protein [KO:K11070 ]
BN85410780 potB; Spermidine/putrescine ABC superfamily ATP binding cassette transporter, permease protein [KO:K11071 ]
BN85410830 potB; ABC-type spermidine/putrescine transport system, permease component [KO:K11071 ]
BN85402320 ABC-type transporter-like (ATPase component) containing molybdate/tungstate binding domain [KO:K10112 ] [EC:7.5.2.-]
BN85406420 putative ABC transporter subunit, ATP-binding [KO:K10112 ] [EC:7.5.2.-]
BN85414230 malK; Sugar ABC transporter, ATP-binding protein) [KO:K10112 ] [EC:7.5.2.-]
BN85406380 carbohydrate ABC transporter subunit, extracellular solute-binding protein [KO:K17318 ]
BN85408540 Branched-chain amino acid ABC transporter, permease protein [KO:K23536 ]
BN85401670 pstS; ABC-type phosphate transport system, substrate-binding component [KO:K02040 ]
BN85401680 pstC; Phosphate ABC superfamily ATP binding cassette transporter, permease protein [KO:K02037 ]
BN85403920 Amino acid ABC transporter, permease protein (His/Glu/Gln/Arg/opine family) [KO:K17077 ]
BN85404190 Amino acid ABC transporter (glutamate), amino acid-binding/permease protein [KO:K17073 ]
BN85404200 Amino acid ABC transporter, amino acid-binding and permease protein [KO:K17074 ]
BN85404210 glnQ; ABC-type glutamine transport system, ATPase component [KO:K17076 ]
BN85405470 predicted ABC-type metal ion transport system, periplasmic component/surface antigen [KO:K02073 ]
BN85402190 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component [KO:K15581 ]
BN85402200 ABC-type dipeptide/oligopeptide/nickel transport systems, permease component [KO:K15582 ]
BN85406010 Metal ion ABC transport system, periplasmic component/surface adhesin [KO:K09815 ]
BN85405620 Metal ion ABC transporter, periplasmic zinc-binding protein [KO:K11707 ]
BN85413140 cbiQ; Cobalt ABC superfamily ATP binding cassette transporter, membrane protein [KO:K16785 ]
BN85413160 cbiO; Cobalt ABC superfamily ATP binding cassette transporter [KO:K16786 ] [EC:7.-.-.-]
BN85413150 cbiO; ABC-type cobalt transport system, ATPase component [KO:K16787 ] [EC:7.-.-.-]
BN85411770 ABC-type transport system, permease and ATPase components [KO:K18889 ]
BN85405540 ABC-type transport system, permease and ATPase components [KO:K18889 ]
BN85411760 ABC-type transport system, permease and ATPase components [KO:K18890 ]
BN85405550 ABC-type transport system, permease and ATPase components [KO:K18890 ]
BN85406890 ABC-type transport system, permease and ATPase components [KO:K18887 ]
BN85410200 ABC-type multidrug transport system, ATPase and permease components [KO:K18887 ]
BN85403710 ndvA; Cyclic beta-1,2-glucan ABC superfamily ATP binding cassette/membrane protein [KO:K18888 ]
BN85410190 ABC-type transport system, permease and ATP-binding components [KO:K18888 ]
BN85405930 ABC-type transport system, permease and ATPase components [KO:K18888 ]
BN85406900 ABC-type transport system, permease and ATPase components [KO:K18888 ]
BN85400780 similar to bacteriocin transporter subunit, putative fragment [KO:K20344 ]
BN85400800 putative ABC-type bacteriocin transporter subunit (ATPase, permease) [KO:K20344 ]
BN85400790 similar to bacteriocin transporter subunit, putative fragment [KO:K20344 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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