KEGG   PATHWAY: apan00195
Entry
apan00195                   Pathway                                
Name
Photosynthesis - Andrographis paniculata
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
apan00195  Photosynthesis
apan00195

Module
apan_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:apan00195]
apan_M00161  Photosystem II [PATH:apan00195]
apan_M00163  Photosystem I [PATH:apan00195]
Organism
Andrographis paniculata [GN:apan]
Gene
17097672  psbA; photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
127261478  photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
127261503  photosystem II protein D1 [KO:K02703] [EC:1.10.3.9]
127240792  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
127240800  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
127240801  photosystem II protein D1-like [KO:K02703] [EC:1.10.3.9]
17097739  psbB; photosystem II 47 kDa protein [KO:K02704]
127261541  photosystem II CP47 reaction center protein [KO:K02704]
127261542  LOW QUALITY PROTEIN: photosystem II CP47 reaction center protein-like [KO:K02704]
17097698  psbC; photosystem II 44 kDa protein [KO:K02705]
127261537  LOW QUALITY PROTEIN: photosystem II CP43 reaction center protein-like [KO:K02705]
17097697  psbD; photosystem II protein D2 [KO:K02706] [EC:1.10.3.9]
127257440  LOW QUALITY PROTEIN: photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
127257457  LOW QUALITY PROTEIN: photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
127257470  LOW QUALITY PROTEIN: photosystem II D2 protein-like [KO:K02706] [EC:1.10.3.9]
17097728  psbE; photosystem II protein V [KO:K02707]
17097727  psbF; photosystem II protein VI [KO:K02708]
17097742  psbH; photosystem II protein H [KO:K02709]
17097678  psbI; photosystem II protein I [KO:K02710]
17097725  psbJ; photosystem II protein J [KO:K02711]
17097677  psbK; photosystem II protein K [KO:K02712]
17097726  psbL; photosystem II protein L [KO:K02713]
17097692  psbM; PSII M protein [KO:K02714]
127243925  oxygen-evolving enhancer protein 1, chloroplastic [KO:K02716]
127257954  oxygen-evolving enhancer protein 1, chloroplastic-like [KO:K02716]
127254955  oxygen-evolving enhancer protein 2, chloroplastic-like [KO:K02717]
127252305  psbP-like protein 1, chloroplastic isoform X1 [KO:K02717]
127254980  oxygen-evolving enhancer protein 3-1, chloroplastic-like [KO:K08901]
127247196  photosynthetic NDH subunit of lumenal location 3, chloroplastic [KO:K08901]
127253461  oxygen-evolving enhancer protein 3-1, chloroplastic-like [KO:K08901]
127253325  photosystem II 10 kDa polypeptide, chloroplastic [KO:K03541]
127246652  photosystem II 22 kDa protein, chloroplastic-like [KO:K03542]
127250298  photosystem II 22 kDa protein, chloroplastic [KO:K03542]
17097740  psbT; photosystem II protein T [KO:K02718]
127258748  photosystem II reaction center W protein, chloroplastic [KO:K02721]
127264110  photosystem II core complex proteins psbY, chloroplastic [KO:K02723]
17097700  psbZ; photosystem II protein Z [KO:K02724]
127255021  photosystem II repair protein PSB27-H1, chloroplastic [KO:K08902]
127259050  photosystem II reaction center PSB28 protein, chloroplastic [KO:K08903]
17097705  psaA; photosystem I P700 chlorophyll a apoprotein A1 [KO:K02689] [EC:1.97.1.12]
127261538  photosystem I P700 chlorophyll a apoprotein A1 [KO:K02689] [EC:1.97.1.12]
17097704  psaB; photosystem I P700 chlorophyll a apoprotein A2 [KO:K02690] [EC:1.97.1.12]
127261540  photosystem I P700 chlorophyll a apoprotein A2 [KO:K02690] [EC:1.97.1.12]
17097778  psaC; photosystem I subunit VII [KO:K02691] [EC:1.97.1.12]
127250904  photosystem I reaction center subunit II, chloroplastic-like [KO:K02692]
127242891  photosystem I reaction center subunit IV, chloroplastic [KO:K02693]
127249943  photosystem I reaction center subunit III, chloroplastic [KO:K02694]
127247311  photosystem I reaction center subunit V, chloroplastic [KO:K08905]
127262825  photosystem I reaction center subunit VI, chloroplastic-like [KO:K02695]
17097721  psaI; PSI reaction center subunit VIII [KO:K02696]
17097733  psaJ; PSI reaction centre subunit IX [KO:K02697]
127247911  photosystem I reaction center subunit psaK, chloroplastic [KO:K02698]
127260145  photosystem I reaction center subunit XI, chloroplastic [KO:K02699]
127258205  photosystem I reaction center subunit N, chloroplastic [KO:K02701]
127266683  photosystem I subunit O [KO:K14332]
17097724  petA; cytochrome f [KO:K02634]
127261549  cytochrome f [KO:K02634]
17097743  petB; cytochrome b6 [KO:K02635]
127261496  cytochrome b6-like [KO:K02635]
127261497  cytochrome b6-like [KO:K02635]
127261520  LOW QUALITY PROTEIN: cytochrome b6-like [KO:K02635]
127263036  cytochrome b6-f complex iron-sulfur subunit, chloroplastic [KO:K02636] [EC:7.1.1.6]
17097744  petD; cytochrome b6/f complex subunit IV [KO:K02637]
127261522  cytochrome b6-f complex subunit 4 [KO:K02637]
127261524  cytochrome b6-f complex subunit 4-like [KO:K02637]
127261555  cytochrome b6-f complex subunit 4 [KO:K02637]
17097730  petG; cytochrome b6/f complex subunit V [KO:K02640]
17097691  petN; cytochrome b6/f complex subunit VIII [KO:K03689]
127265250  plastocyanin-like [KO:K02638]
127244342  uncharacterized protein LOC127244342 [KO:K02639]
127266538  ferredoxin C 1, chloroplastic [KO:K02639]
127239487  ferredoxin, root R-B1 [KO:K02639]
127262010  ferredoxin, leaf L-A-like [KO:K02639]
127262059  ferredoxin, leaf L-A-like [KO:K02639]
127262061  ferredoxin, leaf L-A-like [KO:K02639]
127240358  ferredoxin C 2, chloroplastic [KO:K02639]
127257875  ferredoxin--NADP reductase, leaf isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
127254579  ferredoxin--NADP reductase, root-type isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
127248062  cytochrome c6, chloroplastic isoform X1 [KO:K08906]
17097717  atpE; ATP synthase CF1 epsilon subunit [KO:K02114]
17097718  atpB; ATP synthase CF1 beta subunit [KO:K02112] [EC:7.1.2.2 7.2.2.1]
127261545  ATP synthase subunit beta, chloroplastic [KO:K02112] [EC:7.1.2.2 7.2.2.1]
127255011  ATP synthase gamma chain, chloroplastic-like isoform X1 [KO:K02115]
127247489  ATP synthase gamma chain, chloroplastic [KO:K02115]
17097682  atpA; ATP synthase CF1 alpha subunit [KO:K02111] [EC:7.1.2.2 7.2.2.1]
127261501  ATP synthase subunit alpha, chloroplastic [KO:K02111] [EC:7.1.2.2 7.2.2.1]
127261543  ATP synthase subunit alpha, chloroplastic [KO:K02111] [EC:7.1.2.2 7.2.2.1]
127248354  ATP synthase delta chain, chloroplastic [KO:K02113]
17097683  atpF; ATP synthase CF0 B subunit [KO:K02109]
127250139  ATP synthase subunit b', chloroplastic [KO:K02109]
17097684  atpH; ATP synthase CF0 C subunit [KO:K02110]
17097685  atpI; ATP synthase CF0 A subunit [KO:K02108]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
PMID:14764885
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
PMID:12518057
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
PMID:11217865
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
PMID:11418848
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
PMID:11369223
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
PMID:11914373
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
apan00196  Photosynthesis - antenna proteins
apan00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   
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