PATHWAY: apib01100 Help Entry apib01100                   Pathway                                 Name Metabolic pathways - Apibacter sp. B2966 Class BRITE hierarchy Pathway map apib01100   Metabolic pathways Module apib_M00002   Glycolysis, core module involving three-carbon compounds [PATH:apib01100] apib_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:apib01100] apib_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:apib01100] apib_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:apib01100] apib_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:apib01100] apib_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:apib01100] apib_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:apib01100] apib_M00015   Proline biosynthesis, glutamate => proline [PATH:apib01100] apib_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:apib01100] apib_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:apib01100] apib_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:apib01100] apib_M00021   Cysteine biosynthesis, serine => cysteine [PATH:apib01100] apib_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:apib01100] apib_M00026   Histidine biosynthesis, PRPP => histidine [PATH:apib01100] apib_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:apib01100] apib_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:apib01100] apib_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:apib01100] apib_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:apib01100] apib_M00063   CMP-KDO biosynthesis [PATH:apib01100] apib_M00082   Fatty acid biosynthesis, initiation [PATH:apib01100] apib_M00083   Fatty acid biosynthesis, elongation [PATH:apib01100] apib_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:apib01100] apib_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:apib01100] apib_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:apib01100] apib_M00140   C1-unit interconversion, prokaryotes [PATH:apib01100] apib_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:apib01100] apib_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:apib01100] apib_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:apib01100] apib_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:apib01100] apib_M00535   Isoleucine biosynthesis, pyruvate => 2-oxobutanoate [PATH:apib01100] apib_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:apib01100] apib_M00793   dTDP-L-rhamnose biosynthesis [PATH:apib01100] apib_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:apib01100] apib_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:apib01100] Organism Apibacter sp. B2966 [GN:apib] Related pathway apib00010   Glycolysis / Gluconeogenesis apib00020   Citrate cycle (TCA cycle) apib00030   Pentose phosphate pathway apib00040   Pentose and glucuronate interconversions apib00051   Fructose and mannose metabolism apib00052   Galactose metabolism apib00053   Ascorbate and aldarate metabolism apib00061   Fatty acid biosynthesis apib00071   Fatty acid degradation apib00130   Ubiquinone and other terpenoid-quinone biosynthesis apib00190   Oxidative phosphorylation apib00220   Arginine biosynthesis apib00230   Purine metabolism apib00240   Pyrimidine metabolism apib00250   Alanine, aspartate and glutamate metabolism apib00260   Glycine, serine and threonine metabolism apib00261   Monobactam biosynthesis apib00270   Cysteine and methionine metabolism apib00280   Valine, leucine and isoleucine degradation apib00290   Valine, leucine and isoleucine biosynthesis apib00300   Lysine biosynthesis apib00310   Lysine degradation apib00330   Arginine and proline metabolism apib00332   Carbapenem biosynthesis apib00340   Histidine metabolism apib00350   Tyrosine metabolism apib00360   Phenylalanine metabolism apib00362   Benzoate degradation apib00380   Tryptophan metabolism apib00400   Phenylalanine, tyrosine and tryptophan biosynthesis apib00401   Novobiocin biosynthesis apib00410   beta-Alanine metabolism apib00430   Taurine and hypotaurine metabolism apib00450   Selenocompound metabolism apib00460   Cyanoamino acid metabolism apib00470   D-Amino acid metabolism apib00480   Glutathione metabolism apib00500   Starch and sucrose metabolism apib00520   Amino sugar and nucleotide sugar metabolism apib00521   Streptomycin biosynthesis apib00523   Polyketide sugar unit biosynthesis apib00525   Acarbose and validamycin biosynthesis apib00540   Lipopolysaccharide biosynthesis apib00541   O-Antigen nucleotide sugar biosynthesis apib00542   O-Antigen repeat unit biosynthesis apib00543   Exopolysaccharide biosynthesis apib00550   Peptidoglycan biosynthesis apib00552   Teichoic acid biosynthesis apib00561   Glycerolipid metabolism apib00564   Glycerophospholipid metabolism apib00620   Pyruvate metabolism apib00630   Glyoxylate and dicarboxylate metabolism apib00640   Propanoate metabolism apib00650   Butanoate metabolism apib00660   C5-Branched dibasic acid metabolism apib00670   One carbon pool by folate apib00680   Methane metabolism apib00710   Carbon fixation by Calvin cycle apib00720   Other carbon fixation pathways apib00730   Thiamine metabolism apib00740   Riboflavin metabolism apib00750   Vitamin B6 metabolism apib00760   Nicotinate and nicotinamide metabolism apib00770   Pantothenate and CoA biosynthesis apib00780   Biotin metabolism apib00785   Lipoic acid metabolism apib00790   Folate biosynthesis apib00860   Porphyrin metabolism apib00900   Terpenoid backbone biosynthesis apib00910   Nitrogen metabolism apib00920   Sulfur metabolism apib00946   Degradation of flavonoids apib00999   Biosynthesis of various plant secondary metabolites apib01056   Biosynthesis of type II polyketide backbone KO pathway ko01100     LinkDB All DBs

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