KEGG   PATHWAY: asun02010
Entry
asun02010                   Pathway                                
Name
ABC transporters - Arthrobacter sunyaminii
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
asun02010  ABC transporters
asun02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Arthrobacter sunyaminii [GN:asun]
Gene
KG104_03990  ABC transporter substrate-binding protein [KO:K15553]
KG104_01000  aliphatic sulfonate ABC transporter substrate-binding protein [KO:K15553]
KG104_03985  ABC transporter permease [KO:K15554]
KG104_00995  ABC transporter permease [KO:K15554]
KG104_03980  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
KG104_01005  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
KG104_06130  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
KG104_06135  ABC transporter permease subunit [KO:K02018]
KG104_03540  extracellular solute-binding protein [KO:K02012]
KG104_03535  iron ABC transporter permease [KO:K02011]
KG104_04335  glycine betaine ABC transporter substrate-binding protein [KO:K05845]
KG104_13960  ABC transporter substrate-binding protein [KO:K05845]
KG104_04320  ABC transporter permease [KO:K05846]
KG104_04330  ABC transporter permease [KO:K05846]
KG104_13965  ABC transporter permease [KO:K05846]
KG104_13970  ABC transporter permease [KO:K05846]
KG104_04325  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
KG104_13975  ATP-binding cassette domain-containing protein [KO:K05847] [EC:7.6.2.9]
KG104_02470  maltose ABC transporter substrate-binding protein [KO:K10108]
KG104_02475  ABC transporter permease subunit [KO:K10109]
KG104_02265  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
KG104_03530  ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
KG104_16170  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
KG104_02480  sugar ABC transporter permease [KO:K15772]
KG104_03480  ABC transporter substrate-binding protein [KO:K10117]
KG104_03695  extracellular solute-binding protein [KO:K10117]
KG104_07040  extracellular solute-binding protein [KO:K10117]
KG104_09270  extracellular solute-binding protein [KO:K10117]
KG104_03475  sugar ABC transporter permease [KO:K10118]
KG104_03690  sugar ABC transporter permease [KO:K10118]
KG104_07045  sugar ABC transporter permease [KO:K10118]
KG104_09275  sugar ABC transporter permease [KO:K10118]
KG104_03470  carbohydrate ABC transporter permease [KO:K10119]
KG104_03685  carbohydrate ABC transporter permease [KO:K10119]
KG104_07050  carbohydrate ABC transporter permease [KO:K10119]
KG104_09280  carbohydrate ABC transporter permease [KO:K10119]
KG104_17070  sugar ABC transporter substrate-binding protein [KO:K10227]
KG104_17075  sugar ABC transporter permease [KO:K10228]
KG104_17080  carbohydrate ABC transporter permease [KO:K10229]
KG104_16155  extracellular solute-binding protein [KO:K10236]
KG104_16160  sugar ABC transporter permease [KO:K10237]
KG104_16165  carbohydrate ABC transporter permease [KO:K10238]
KG104_09925  extracellular solute-binding protein [KO:K10240]
KG104_09930  sugar ABC transporter permease [KO:K10241]
KG104_09935  carbohydrate ABC transporter permease [KO:K10242]
KG104_03190  sugar-binding protein [KO:K10546]
KG104_09535  sugar-binding protein [KO:K10546]
KG104_03200  sugar ABC transporter permease [KO:K10547]
KG104_09525  sugar ABC transporter permease [KO:K10547]
KG104_03195  ATP-binding cassette domain-containing protein [KO:K10548] [EC:7.5.2.-]
KG104_09530  ATP-binding cassette domain-containing protein [KO:K10548] [EC:7.5.2.-]
KG104_04630  BMP family ABC transporter substrate-binding protein [KO:K07335]
KG104_04640  ABC transporter permease [KO:K23535]
KG104_04645  ABC transporter permease [KO:K23536]
KG104_04635  ABC transporter ATP-binding protein [KO:K23537]
KG104_03630  ABC transporter substrate-binding protein [KO:K10439]
KG104_00805  substrate-binding domain-containing protein [KO:K10439]
KG104_03620  ribose ABC transporter permease [KO:K10440]
KG104_00815  ABC transporter permease [KO:K10440]
KG104_03625  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
KG104_00810  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
KG104_17565  pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
KG104_00575  pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
KG104_00580  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
KG104_00585  pstA; phosphate ABC transporter permease PstA [KO:K02038]
KG104_00590  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
KG104_06940  amino acid ABC transporter substrate-binding protein/permease [KO:K10036 K10037]
KG104_06945  amino acid ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
KG104_13750  glutamate ABC transporter substrate-binding protein [KO:K10005]
KG104_13755  ABC transporter permease subunit [KO:K10006]
KG104_13760  amino acid ABC transporter permease [KO:K10007]
KG104_13745  amino acid ABC transporter ATP-binding protein [KO:K10008] [EC:7.4.2.1]
KG104_01070  amino acid ABC transporter substrate-binding protein [KO:K02424]
KG104_01065  amino acid ABC transporter permease [KO:K10009]
KG104_01060  amino acid ABC transporter ATP-binding protein [KO:K10010] [EC:7.4.2.1]
KG104_04710  ABC transporter substrate-binding protein [KO:K01999]
KG104_08880  ABC transporter substrate-binding protein [KO:K01999]
KG104_12940  ABC transporter substrate-binding protein [KO:K01999]
KG104_04730  branched-chain amino acid ABC transporter permease [KO:K01997]
KG104_08890  branched-chain amino acid ABC transporter permease [KO:K01997]
KG104_12930  branched-chain amino acid ABC transporter permease [KO:K01997]
KG104_04725  branched-chain amino acid ABC transporter permease [KO:K01998]
KG104_08895  branched-chain amino acid ABC transporter ATP-binding protein/permease [KO:K01995 K01998]
KG104_12935  branched-chain amino acid ABC transporter permease [KO:K01998]
KG104_04720  ABC transporter ATP-binding protein [KO:K01995]
KG104_12920  ABC transporter ATP-binding protein [KO:K01995]
KG104_04715  ABC transporter ATP-binding protein [KO:K01996]
KG104_08900  ABC transporter ATP-binding protein [KO:K01996]
KG104_12925  ABC transporter ATP-binding protein [KO:K01996]
KG104_13575  ABC transporter [KO:K02073]
KG104_13570  ABC transporter permease [KO:K02072]
KG104_13565  ATP-binding cassette domain-containing protein [KO:K02071]
KG104_04065  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
KG104_04060  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
KG104_04055  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
KG104_04050  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
KG104_04045  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
KG104_13830  ABC transporter substrate-binding protein [KO:K15580]
KG104_13825  ABC transporter permease [KO:K15581]
KG104_13820  ABC transporter permease [KO:K15582]
KG104_12500  ABC transporter ATP-binding protein [KO:K10823 K15583]
KG104_13040  ABC transporter ATP-binding protein [KO:K10823 K15583]
KG104_13815  ABC transporter ATP-binding protein [KO:K10823 K15583]
KG104_13025  ABC transporter family substrate-binding protein [KO:K13889]
KG104_13835  ABC transporter family substrate-binding protein [KO:K13889]
KG104_13030  ABC transporter permease [KO:K13890]
KG104_13035  ABC transporter permease [KO:K13891]
KG104_16295  ABC transporter substrate-binding protein [KO:K25286]
KG104_16255  iron chelate uptake ABC transporter family permease subunit [KO:K23186]
KG104_16250  iron chelate uptake ABC transporter family permease subunit [KO:K23187]
KG104_16245  ABC transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
KG104_15750  iron-siderophore ABC transporter substrate-binding protein [KO:K23227]
KG104_15745  iron ABC transporter permease [KO:K23228]
KG104_15755  ABC transporter ATP-binding protein [KO:K10829] [EC:7.2.2.16]
KG104_09685  biotin transporter BioY [KO:K03523]
KG104_09695  energy-coupling factor transporter transmembrane protein EcfT [KO:K16783]
KG104_09690  energy-coupling factor ABC transporter ATP-binding protein [KO:K16784] [EC:7.6.2.-]
KG104_16065  energy-coupling factor transporter transmembrane protein EcfT [KO:K16785]
KG104_16750  ABC transporter permease [KO:K11051]
KG104_16755  ABC transporter ATP-binding protein [KO:K11050]
KG104_12230  ABC transporter permease [KO:K09692]
KG104_12225  ATP-binding cassette domain-containing protein [KO:K09693] [EC:7.5.2.4]
KG104_04550  ABC transporter permease [KO:K09694]
KG104_04555  ABC transporter permease [KO:K09694]
KG104_04545  ABC transporter ATP-binding protein [KO:K09695]
KG104_09180  ABC transporter permease [KO:K09813]
KG104_10230  ABC transporter permease [KO:K09813]
KG104_09175  ABC transporter ATP-binding protein [KO:K09814] [EC:7.6.2.-]
KG104_13125  ftsX; permease-like cell division protein FtsX [KO:K09811]
KG104_13130  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
KG104_09860  ABC transporter ATP-binding protein/permease [KO:K18887]
KG104_09855  ABC transporter ATP-binding protein/permease [KO:K18888]
KG104_07185  cydD; thiol reductant ABC exporter subunit CydD [KO:K16014]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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