PATHWAY: bfn02010 Help
Entry
Name
ABC transporters - Paraburkholderia fungorum
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Paraburkholderia fungorum [GN:
bfn ]
Gene
OI25_1247 sulfate ABC transporter, sulfate-binding family protein [KO:K02048 ]
OI25_3321 sulfate ABC transporter, sulfate-binding family protein [KO:K23163 ]
OI25_1197 tauA; taurine ABC transporter, periplasmic binding protein [KO:K15551 ]
OI25_4380 tauA; taurine ABC transporter, periplasmic binding protein [KO:K15551 ]
OI25_1195 binding--dependent transport system inner membrane component family protein [KO:K15552 ]
OI25_4382 binding--dependent transport system inner membrane component family protein [KO:K15552 ]
OI25_5458 ABC transporter, substrate-binding, aliphatic sulfonates family protein [KO:K15553 ]
OI25_64 bacterial extracellular solute-binding s, 3 family protein [KO:K15553 ]
OI25_171 ABC transporter, substrate-binding, aliphatic sulfonates family protein [KO:K15553 ]
OI25_175 ABC transporter, substrate-binding, aliphatic sulfonates family protein [KO:K15553 ]
OI25_3945 ABC transporter, substrate-binding, aliphatic sulfonates family protein [KO:K15553 ]
OI25_3734 ABC transporter, substrate-binding, aliphatic sulfonates family protein [KO:K15553 ]
OI25_7072 ABC transporter, substrate-binding, aliphatic sulfonates family protein [KO:K15553 ]
OI25_4230 ABC transporter, substrate-binding, aliphatic sulfonates family protein [KO:K15553 ]
OI25_7664 bacterial extracellular solute-binding s, 3 family protein [KO:K15553 ]
OI25_3378 bacterial extracellular solute-binding s, 3 family protein [KO:K15553 ]
OI25_97 bacterial extracellular solute-binding s, 3 family protein [KO:K15553 ]
OI25_6203 bacterial extracellular solute-binding s, 3 family protein [KO:K15553 ]
OI25_65 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_66 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_3789 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_3735 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_6726 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_6728 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_55 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_3939 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_3380 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_98 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_6201 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_7662 binding--dependent transport system inner membrane component family protein [KO:K15554 ]
OI25_5260 modA; molybdate ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
OI25_4268 bacterial extracellular solute-binding family protein [KO:K02020 ]
OI25_7777 bacterial extracellular solute-binding family protein [KO:K02020 ]
OI25_6951 bacterial extracellular solute-binding family protein [KO:K02020 ]
OI25_4288 bacterial extracellular solute-binding family protein [KO:K02012 ]
OI25_4859 putative 2-aminoethylphosphonate ABC transporter, periplasmic 2-aminoethylphosphonate-binding protein [KO:K02012 ]
OI25_6854 bacterial extracellular solute-binding family protein [KO:K02012 ]
OI25_4289 binding--dependent transport system inner membrane component family protein [KO:K02011 ]
OI25_4862 putative 2-aminoethylphosphonate ABC transporter, permease protein [KO:K02011 ]
OI25_6853 binding--dependent transport system inner membrane component family protein [KO:K02011 ]
OI25_3246 bacterial extracellular solute-binding family protein [KO:K11073 ]
OI25_5931 bacterial extracellular solute-binding family protein [KO:K11073 ]
OI25_5191 bacterial extracellular solute-binding family protein [KO:K11073 ]
OI25_6992 bacterial extracellular solute-binding family protein [KO:K11073 ]
OI25_6715 bacterial extracellular solute-binding family protein [KO:K11073 ]
OI25_3249 binding--dependent transport system inner membrane component family protein [KO:K11074 ]
OI25_6712 binding--dependent transport system inner membrane component family protein [KO:K11074 ]
OI25_3248 binding--dependent transport system inner membrane component family protein [KO:K11075 ]
OI25_6713 binding--dependent transport system inner membrane component family protein [KO:K11075 ]
OI25_4333 phnS; 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [KO:K11081 ]
OI25_4330 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV [KO:K11082 ]
OI25_4331 phnU; 2-aminoethylphosphonate ABC transporter, permease protein [KO:K11083 ]
OI25_4332 phnT; 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT [KO:K11084 ]
OI25_4030 choX; choline ABC transporter, periplasmic binding family protein [KO:K02002 ]
OI25_4001 choX; choline ABC transporter, periplasmic binding family protein [KO:K02002 ]
OI25_4007 substrate binding domain of ABC-type glycine betaine transport system family protein [KO:K02002 ]
OI25_6580 choX; choline ABC transporter, periplasmic binding family protein [KO:K02002 ]
OI25_5407 substrate binding domain of ABC-type glycine betaine transport system family protein [KO:K05845 ]
OI25_5406 binding--dependent transport system inner membrane component family protein [KO:K05846 ]
OI25_5408 binding--dependent transport system inner membrane component family protein [KO:K05846 ]
OI25_2171 bacterial extracellular solute-binding family protein [KO:K10227 ]
OI25_2172 binding--dependent transport system inner membrane component family protein [KO:K10228 ]
OI25_2173 binding--dependent transport system inner membrane component family protein [KO:K10229 ]
OI25_1839 mlaD; outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067 ]
OI25_7106 branched-chain amino acid transport system / permease component family protein [KO:K23535 ]
OI25_7101 branched-chain amino acid transport system / permease component family protein [KO:K23535 ]
OI25_3236 branched-chain amino acid transport system / permease component family protein [KO:K23535 ]
OI25_3237 branched-chain amino acid transport system / permease component family protein [KO:K23536 ]
OI25_7105 branched-chain amino acid transport system / permease component family protein [KO:K23536 ]
OI25_7100 branched-chain amino acid transport system / permease component family protein [KO:K23536 ]
OI25_702 bacterial extracellular solute-binding family protein [KO:K17315 ]
OI25_4500 bacterial extracellular solute-binding family protein [KO:K17315 ]
OI25_701 binding--dependent transport system inner membrane component family protein [KO:K17316 ]
OI25_4499 binding--dependent transport system inner membrane component family protein [KO:K17316 ]
OI25_700 binding--dependent transport system inner membrane component family protein [KO:K17317 ]
OI25_4498 binding--dependent transport system inner membrane component family protein [KO:K17317 ]
OI25_766 branched-chain amino acid transport system / permease component family protein [KO:K10440 ]
OI25_2182 branched-chain amino acid transport system / permease component family protein [KO:K10440 ]
OI25_6768 branched-chain amino acid transport system / permease component family protein [KO:K10440 ]
OI25_4693 branched-chain amino acid transport system / permease component family protein [KO:K10440 ]
OI25_6670 branched-chain amino acid transport system / permease component family protein [KO:K10440 ]
OI25_4476 branched-chain amino acid transport system / permease component family protein [KO:K10440 ]
OI25_2007 branched-chain amino acid transport system / permease component family protein [KO:K10538 ]
OI25_1479 branched-chain amino acid transport system / permease component family protein [KO:K10538 ]
OI25_4306 branched-chain amino acid transport system / permease component family protein [KO:K23509 ]
OI25_1319 branched-chain amino acid transport system / permease component family protein [KO:K23509 ]
OI25_4307 branched-chain amino acid transport system / permease component family protein [KO:K23509 ]
OI25_1318 branched-chain amino acid transport system / permease component family protein [KO:K23509 ]
OI25_5186 xylF; D-xylose ABC transporter, D-xylose-binding protein [KO:K10543 ]
OI25_5184 branched-chain amino acid transport system / permease component family protein [KO:K10544 ]
OI25_6647 branched-chain amino acid transport system / permease component family protein [KO:K10553 ]
OI25_6832 rhaS; rhamnose ABC transporter, rhamnose-binding protein [KO:K10559 ]
OI25_6830 branched-chain amino acid transport system / permease component family protein [KO:K10560 ]
OI25_6831 branched-chain amino acid transport system / permease component family protein [KO:K10561 ]
OI25_1898 bacterial extracellular solute-binding family protein [KO:K05813 ]
OI25_1897 binding--dependent transport system inner membrane component family protein [KO:K05814 ]
OI25_1896 binding--dependent transport system inner membrane component family protein [KO:K05815 ]
OI25_7646 pstS; phosphate ABC transporter, phosphate-binding protein PstS [KO:K02040 ]
OI25_2567 pstS; phosphate ABC transporter, phosphate-binding protein PstS [KO:K02040 ]
OI25_2568 pstC; phosphate ABC transporter, permease protein PstC [KO:K02037 ]
OI25_2569 pstA; phosphate ABC transporter, permease protein PstA [KO:K02038 ]
OI25_6589 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein [KO:K02044 ]
OI25_6588 phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042 ]
OI25_155 lysine-arginine-ornithine-binding periplasmic family protein [KO:K10013 ]
OI25_1403 bacterial extracellular solute-binding s, 3 family protein [KO:K10013 ]
OI25_5930 lysine-arginine-ornithine-binding periplasmic family protein [KO:K10013 ]
OI25_6282 lysine-arginine-ornithine-binding periplasmic family protein [KO:K10013 ]
OI25_6522 lysine-arginine-ornithine-binding periplasmic family protein [KO:K10013 ]
OI25_5540 bacterial extracellular solute-binding s, 3 family protein [KO:K10013 ]
OI25_648 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10015 ]
OI25_166 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10015 ]
OI25_647 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10016 ]
OI25_167 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10016 ]
OI25_646 lysine-arginine-ornithine-binding periplasmic family protein [KO:K10014 ]
OI25_5862 bacterial extracellular solute-binding s, 3 family protein [KO:K10036 ]
OI25_5861 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10037 ]
OI25_2048 bacterial extracellular solute-binding s, 3 family protein [KO:K10001 ]
OI25_2050 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10002 ]
OI25_2049 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10003 ]
OI25_4282 bacterial extracellular solute-binding s, 3 family protein [KO:K10018 ]
OI25_4280 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10019 ]
OI25_4281 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10020 ]
OI25_3805 bacterial extracellular solute-binding s, 3 family protein [KO:K02424 ]
OI25_2724 bacterial extracellular solute-binding s, 3 family protein [KO:K02424 ]
OI25_3806 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10009 ]
OI25_2725 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein [KO:K10009 ]
OI25_2605 branched-chain amino acid transport system / permease component family protein [KO:K01997 ]
OI25_6345 branched-chain amino acid transport system / permease component family protein [KO:K01997 K01998 ]
OI25_4040 branched-chain amino acid transport system / permease component family protein [KO:K01997 ]
OI25_7291 branched-chain amino acid transport system / permease component family protein [KO:K01997 ]
OI25_321 branched-chain amino acid transport system / permease component family protein [KO:K01997 ]
OI25_1529 branched-chain amino acid transport system / permease component family protein [KO:K01997 ]
OI25_1533 branched-chain amino acid transport system / permease component family protein [KO:K01997 ]
OI25_2279 branched-chain amino acid transport system / permease component family protein [KO:K01997 ]
OI25_4221 branched-chain amino acid transport system / permease component family protein [KO:K01997 K01998 ]
OI25_3024 branched-chain amino acid transport system / permease component family protein [KO:K01997 K01998 ]
OI25_322 branched-chain amino acid transport system / permease component family protein [KO:K01995 K01998 ]
OI25_1534 branched-chain amino acid transport system / permease component family protein [KO:K01995 K01998 ]
OI25_1530 branched-chain amino acid transport system / permease component family protein [KO:K01998 ]
OI25_2280 branched-chain amino acid transport system / permease component family protein [KO:K01998 ]
OI25_4041 branched-chain amino acid transport system / permease component family protein [KO:K01998 ]
OI25_7292 branched-chain amino acid transport system / permease component family protein [KO:K01998 ]
OI25_2606 branched-chain amino acid transport system / permease component family protein [KO:K01998 ]
OI25_4219 branched chain amino acid ABC transporter, ATP-binding protein [KO:K01996 ]
OI25_2433 binding--dependent transport system inner membrane component family protein [KO:K02072 ]
OI25_6606 binding--dependent transport system inner membrane component family protein [KO:K02072 ]
OI25_778 urtB; urea ABC transporter, permease protein UrtB [KO:K11960 ]
OI25_779 urtC; urea ABC transporter, permease protein UrtC [KO:K11961 ]
OI25_780 urtD; urea ABC transporter, ATP-binding protein UrtD [KO:K11962 ]
OI25_781 urtE; urea ABC transporter, ATP-binding protein UrtE [KO:K11963 ]
OI25_6426 bacterial extracellular solute-binding s, 5 Middle family protein [KO:K15580 ]
OI25_6425 binding--dependent transport system inner membrane component family protein [KO:K15581 ]
OI25_6424 binding--dependent transport system inner membrane component family protein [KO:K15582 ]
OI25_1668 bacterial extracellular solute-binding s, 5 Middle family protein [KO:K12368 ]
OI25_1669 bacterial extracellular solute-binding s, 5 Middle family protein [KO:K12368 ]
OI25_1233 bacterial extracellular solute-binding s, 5 Middle family protein [KO:K12368 ]
OI25_1670 binding--dependent transport system inner membrane component family protein [KO:K12369 ]
OI25_1671 binding--dependent transport system inner membrane component family protein [KO:K12370 ]
OI25_2293 bacterial extracellular solute-binding s, 5 Middle family protein [KO:K13889 ]
OI25_2294 binding--dependent transport system inner membrane component family protein [KO:K13890 ]
OI25_2295 binding--dependent transport system inner membrane component family protein [KO:K13891 ]
OI25_288 bacterial extracellular solute-binding s, 5 Middle family protein [KO:K13893 ]
OI25_3093 bacterial extracellular solute-binding s, 5 Middle family protein [KO:K13893 ]
OI25_287 binding--dependent transport system inner membrane component family protein [KO:K13894 ]
OI25_3094 binding--dependent transport system inner membrane component family protein [KO:K13894 ]
OI25_286 binding--dependent transport system inner membrane component family protein [KO:K13895 ]
OI25_3095 binding--dependent transport system inner membrane component family protein [KO:K13895 ]
OI25_2865 liporeleasing system, transmembrane, LolC/E family protein [KO:K09808 ]
OI25_2866 lolD; liporeleasing system, ATP-binding protein [KO:K09810 ] [EC:7.6.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
LinkDB
All DBs