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Entry
Name
ABC transporters - Burkholderia plantarii PG1
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Burkholderia plantarii PG1 [GN:
bgp ]
Gene
BGL_2c23880 ssuA2; aliphatic sulfonates transport substrate binding protein SsuA [KO:K15553 ]
BGL_2c10340 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component [KO:K15553 ]
BGL_2c10470 ABC transporter, substrate binding protein, aliphatic sulfonates family [KO:K15553 ]
BGL_2c17080 periplasmic ligand-binding protein of ABC transporter, SsuA family [KO:K15553 ]
BGL_2c28950 putative ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [KO:K15553 ]
BGL_1c31710 ABC nitrate/sulfonate/bicarbonatefamilytransporter, periplasmic ligand binding protein [KO:K15553 ]
BGL_1c14960 ABC nitrate/sulfonate/bicarbonate transporter, periplasmic ligand binding protein [KO:K15553 ]
BGL_2c23850 ssuC2; putative aliphatic sulfonates transport permease protein SsuC [KO:K15554 ]
BGL_1c16680 ssuC; putative aliphatic sulfonates transport permease protein SsuC [KO:K15554 ]
BGL_2c01420 ssuC1; putative aliphatic sulfonates transport permease protein SsuC [KO:K15554 ]
BGL_2c22490 spermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein [KO:K11069 ]
BGL_2c04820 phnS; 2-aminoethylphosphonate ABC transport, periplasmic substrate-binding protein PhnS [KO:K11081 ]
BGL_2c04850 phnV; 2-aminoethylphosphonate ABC transport, membrane protein PhnV [KO:K11082 ]
BGL_2c04840 phnU; 2-aminoethylphosphonate ABC transport, permease protein PhnU [KO:K11083 ]
BGL_2c04830 phnT; 2-aminoethylphosphonate ABC transport, ATP-binding protein PhnT [KO:K11084 ]
BGL_2c05740 opuAC; glycine betaine/L-proline ABC transport, periplasmic binding protein OpuAC [KO:K02002 ]
BGL_2c05720 proW; glycine-betaine binding ABC transporter permease protein ProW [KO:K02001 ]
BGL_1c18650 osmF; putative osmoprotectant uptake system substrate-binding protein OsmF [KO:K05845 ]
BGL_2c22930 opuBB; glycine betaine/L-proline ABC transporter periplasmic ligand binding protein OpuBB [KO:K05845 ]
BGL_1c18620 yehW; putative osmoprotectant uptake system permease protein yehW [KO:K05846 ]
BGL_1c18640 yehY; putative osmoprotectant uptake system permease protein yehY [KO:K05846 ]
BGL_2c22920 opuD1; glycine betaine/L-proline ABC transporter permease protein OpuD [KO:K05846 ]
BGL_2c22940 opuD2; glycine betaine/L-proline ABC transporter permease protein OpuD [KO:K05846 ]
BGL_1c30890 ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
BGL_2c24730 putative periplasmic binding protein/LacI transcriptional regulator domain protein [KO:K10439 ]
BGL_2c26710 putative carbohydrate ABC transporter, periplasmic sugar-binding protein [KO:K10439 ]
BGL_2c26730 putative bacterial inner-membrane translocator family protein, permease component [KO:K10440 ]
BGL_2c26740 putative bacterial inner-membrane translocator family protein, permease component [KO:K10440 ]
BGL_1c15120 xylF; xylose ABC transporter, periplasmicsubstrate-binding protein XylF [KO:K10543 ]
BGL_2c07020 rhaS; rhamnose transport system substrate-binding protein RhaS [KO:K10559 ]
BGL_1c03000 ugpB; glycerol-3-phosphate transporter, periplasmic binding protein UgpB [KO:K05813 ]
BGL_1c03010 ugpA; binding-protein-dependent transportsystems inner membrane component UgpA [KO:K05814 ]
BGL_1c03020 ugpE; glycerol-3-phosphate transporter, permease protein UgpE [KO:K05815 ]
BGL_1c00810 argT1; lysine-arginine-ornithine-binding periplasmic protein ArgT [KO:K10013 ]
BGL_1c10490 argT2; lysine-arginine-ornithine-binding periplasmic protein ArgT [KO:K10013 ]
BGL_2c28180 putative lysine-arginine-ornithine-binding periplasmic protein [KO:K10013 ]
BGL_1c29290 cationic amino acid ABC transporter,periplasmicbinding protein [KO:K10014 ]
BGL_1c05480 gltK; polar amino acid ABC transporter, inner membrane subunit [KO:K10002 ]
BGL_1c05470 gltJ; glutamate/aspartate ABC transporter, permease protein GltJ [KO:K10003 ]
BGL_1c16580 ABC transporter, extracellular solute-binding protein, family 3 [KO:K02424 ]
BGL_2c15620 putative ABC branched chain amino acid family transporter, periplasmic ligand binding protein [KO:K01999 ]
BGL_2c03480 putative extracellular ligand-binding receptor domain protein [KO:K01999 ]
BGL_1c30050 ABC branched-chain amino acid family transporter, inner membrane protein [KO:K01997 ]
BGL_1c00550 braF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein BraF [KO:K01995 ]
BGL_1c30030 branched-chain amino acid ABC transporter, ATP-binding protein [KO:K01995 ]
BGL_1c00560 braG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein BraG [KO:K01996 ]
BGL_2c28200 metQ; D-methionine ABC transporter, periplasmic D-methionine-binding protein MetQ [KO:K02073 ]
BGL_1c09290 metQ; D-methionine ABC transporter, periplasmic D-methionine-binding protein MetQ [KO:K02073 ]
BGL_2c29210 putative ABC-type oligopeptide transport system, periplasmic component [KO:K13893 ]
BGL_1c06430 wcbD; capsular polysaccharide exportinner-membrane protein WcbD [KO:K10107 ]
BGL_1c06530 putative capsular polysaccharide export ABC transporter, transmembrane protein [KO:K09688 ]
BGL_1c26140 lolC; lipoprotein-releasing system transmembrane protein LolC [KO:K09808 ]
BGL_1c26130 lolD; lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
BGL_2c15990 putative ABC transporter protein, ATP-binding protein [KO:K14698 ] [EC:7.-.-.-]
BGL_2c15980 putative ABC transporter protein, ATP-binding protein [KO:K14699 ] [EC:7.-.-.-]
BGL_2c19500 etsB; macrolide transporter ATP-binding/permease protein EtsB [KO:K05685 ] [EC:7.6.2.-]
BGL_2c05230 RND efflux transporter, ATP-binding/permease protein [KO:K05685 ] [EC:7.6.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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