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Entry
Name
ABC transporters - Butyrate-producing bacterium SS3/4
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Butyrate-producing bacterium SS3/4 [GN:
bprs ]
Gene
CK3_08650 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [KO:K15553 ]
CK3_08670 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [KO:K15554 ]
CK3_22290 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [KO:K15598 ]
CK3_22280 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [KO:K15599 ]
CK3_22270 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [KO:K15600 ]
CK3_24070 carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-) [KO:K02010 ] [EC:7.2.2.7 ]
CK3_12230 ABC-type spermidine/putrescine transport system, permease component I [KO:K11071 ]
CK3_19700 ABC-type sugar transport systems, ATPase components [KO:K10112 ] [EC:7.5.2.-]
CK3_00370 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein [KO:K07335 ]
CK3_34600 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein [KO:K07335 ]
CK3_34580 ABC-type uncharacterized transport system, permease component [KO:K23535 ]
CK3_34570 Uncharacterized ABC-type transport system, permease component [KO:K23536 ]
CK3_08530 ABC-type sugar transport system, periplasmic component [KO:K10439 ]
CK3_03120 ABC-type sugar transport system, periplasmic component [KO:K10439 ]
CK3_03110 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) [KO:K10440 ]
CK3_08550 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [KO:K10440 ]
CK3_03100 monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) [KO:K10441 ] [EC:7.5.2.7 ]
CK3_23770 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) [KO:K10540 ]
CK3_23780 monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) [KO:K10540 ]
CK3_23800 monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) [KO:K10541 ]
CK3_13830 phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1) [KO:K02040 ]
CK3_13840 phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) [KO:K02037 ]
CK3_13850 phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) [KO:K02038 ]
CK3_22210 ABC-type phosphate/phosphonate transport system, periplasmic component [KO:K02044 ]
CK3_10470 amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) [KO:K23059 ]
CK3_23170 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [KO:K23059 ]
CK3_23180 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family [KO:K17077 ]
CK3_10480 amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-) [KO:K17077 ]
CK3_22640 amino acid/amide ABC transporter substrate-binding protein, HAAT family (TC 3.A.1.4.-) [KO:K01999 ]
CK3_22610 amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-) [KO:K01998 ]
CK3_22600 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family (TC 3.A.1.4.-) [KO:K01995 ]
CK3_22590 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family (TC 3.A.1.4.-) [KO:K01996 ]
CK3_18700 ABC-type metal ion transport system, periplasmic component/surface antigen [KO:K02073 ]
CK3_31860 ABC-type metal ion transport system, periplasmic component/surface antigen [KO:K02073 ]
CK3_18710 ABC-type metal ion transport system, permease component [KO:K02072 ]
CK3_31870 ABC-type metal ion transport system, permease component [KO:K02072 ]
CK3_16630 ABC-type oligopeptide transport system, periplasmic component [KO:K15580 ]
CK3_16620 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [KO:K15581 ]
CK3_16610 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [KO:K15582 ]
CK3_16600 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [KO:K15583 ]
CK3_16590 ATPase components of various ABC-type transport systems, contain duplicated ATPase [KO:K10823 ]
CK3_07570 nickel ABC transporter, periplasmic nickel-binding protein [KO:K15584 ]
CK3_07580 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [KO:K15585 ]
CK3_07590 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [KO:K15586 ]
CK3_21120 ABC-type dipeptide transport system, periplasmic component [KO:K13889 ]
CK3_21110 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [KO:K13890 ]
CK3_21100 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [KO:K13891 ]
CK3_15670 ABC-type metal ion transport system, periplasmic component/surface adhesin [KO:K09815 ]
CK3_15650 ABC-type Mn2+/Zn2+ transport systems, permease components [KO:K09816 ]
CK3_13160 ABC-type cobalt transport system, permease component CbiQ and related transporters [KO:K16785 ]
CK3_13990 ABC-type cobalt transport system, permease component CbiQ and related transporters [KO:K16785 ]
CK3_24670 ABC-type cobalt transport system, permease component CbiQ and related transporters [KO:K16785 ]
CK3_13970 ABC-type cobalt transport system, ATPase component [KO:K16786 ] [EC:7.-.-.-]
CK3_13980 ABC-type cobalt transport system, ATPase component [KO:K16787 ] [EC:7.-.-.-]
CK3_24690 ABC-type cobalt transport system, ATPase component [KO:K16787 ] [EC:7.-.-.-]
CK3_20250 ABC-type polysaccharide/polyol phosphate transport system, ATPase component [KO:K09693 ] [EC:7.5.2.4 ]
CK3_28840 ABC-type multidrug transport system, ATPase component [KO:K16921 ]
CK3_13190 ABC-type multidrug transport system, ATPase and permease components [KO:K14698 ] [EC:7.-.-.-]
CK3_15930 ABC-type multidrug transport system, ATPase and permease components [KO:K14698 ] [EC:7.-.-.-]
CK3_13200 ABC-type multidrug transport system, ATPase and permease components [KO:K14699 ] [EC:7.-.-.-]
CK3_15940 ABC-type multidrug transport system, ATPase and permease components [KO:K14699 ] [EC:7.-.-.-]
CK3_34350 ABC-type multidrug transport system, ATPase and permease components [KO:K18889 ]
CK3_34340 ABC-type multidrug transport system, ATPase and permease components [KO:K18890 ]
CK3_22420 ABC-type multidrug transport system, ATPase and permease components [KO:K18887 ]
CK3_29230 ABC-type multidrug transport system, ATPase and permease components [KO:K18888 ]
CK3_22410 ABC-type multidrug transport system, ATPase and permease components [KO:K18888 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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