PATHWAY: bpy02010 Help
Entry
Name
ABC transporters - Paraburkholderia phytofirmans PsJN
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Paraburkholderia phytofirmans PsJN [GN:
bpy ]
Gene
Bphyt_0443 sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K02048 ]
Bphyt_1773 sulfate ABC transporter, periplasmic sulfate-binding protein [KO:K23163 ]
Bphyt_0509 binding-protein-dependent transport systems inner membrane component [KO:K15552 ]
Bphyt_4371 binding-protein-dependent transport systems inner membrane component [KO:K15552 ]
Bphyt_1551 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [KO:K15553 ]
Bphyt_4880 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [KO:K15553 ]
Bphyt_7013 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [KO:K15553 ]
Bphyt_6158 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein [KO:K15553 ]
Bphyt_2096 ABC sulfate ester transporter, periplasmic ligand binding protein [KO:K15553 ]
Bphyt_6157 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [KO:K15553 ]
Bphyt_4035 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein [KO:K15553 ]
Bphyt_1745 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Bphyt_2097 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Bphyt_2098 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Bphyt_1832 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Bphyt_4033 binding-protein-dependent transport systems inner membrane component [KO:K15554 ]
Bphyt_6804 molybdenum ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
Bphyt_4827 binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
Bphyt_5677 binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
Bphyt_4662 binding-protein-dependent transport systems inner membrane component [KO:K11075 ]
Bphyt_2307 binding-protein-dependent transport systems inner membrane component [KO:K11075 ]
Bphyt_4789 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein [KO:K11081 ]
Bphyt_4792 2-aminoethylphosphonate ABC transport system, membrane component PhnV [KO:K11082 ]
Bphyt_4791 2-aminoethylphosphonate ABC transporter, permease protein [KO:K11083 ]
Bphyt_4790 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT [KO:K11084 ]
Bphyt_5072 Substrate-binding region of ABC-type glycine betaine transport system [KO:K02002 ]
Bphyt_3245 binding-protein-dependent transport systems inner membrane component [KO:K10228 ]
Bphyt_3244 binding-protein-dependent transport systems inner membrane component [KO:K10229 ]
Bphyt_5886 binding-protein-dependent transport systems inner membrane component [KO:K17316 ]
Bphyt_1029 binding-protein-dependent transport systems inner membrane component [KO:K17316 ]
Bphyt_5885 binding-protein-dependent transport systems inner membrane component [KO:K17317 ]
Bphyt_1030 binding-protein-dependent transport systems inner membrane component [KO:K17317 ]
Bphyt_2263 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Bphyt_4157 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Bphyt_0964 ABC sugar transporter, periplasmic ligand binding protein [KO:K10439 ]
Bphyt_3236 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Bphyt_4172 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Bphyt_5473 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Bphyt_4184 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Bphyt_5199 ABC sugar transporter, periplasmic ligand binding protein [KO:K10439 ]
Bphyt_6920 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Bphyt_4132 periplasmic binding protein/LacI transcriptional regulator [KO:K10439 ]
Bphyt_4808 periplasmic binding protein/LacI transcriptional regulator [KO:K23508 ]
Bphyt_6632 D-xylose ABC transporter, periplasmic substrate-binding protein [KO:K10543 ]
Bphyt_5681 rhamnose ABC transporter, periplasmic rhamnose-binding protein [KO:K10559 ]
Bphyt_6727 binding-protein-dependent transport systems inner membrane component [KO:K17322 ]
Bphyt_6726 binding-protein-dependent transport systems inner membrane component [KO:K17323 ]
Bphyt_3510 binding-protein-dependent transport systems inner membrane component [KO:K05814 ]
Bphyt_3511 binding-protein-dependent transport systems inner membrane component [KO:K05815 ]
Bphyt_2858 phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
Bphyt_6747 phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
Bphyt_6750 phosphate ABC transporter, periplasmic phosphate-binding protein [KO:K02040 ]
Bphyt_4523 phosphonate ABC transporter, periplasmic phosphonate binding protein [KO:K02044 ]
Bphyt_1566 cationic amino acid ABC transporter, periplasmic binding protein [KO:K10013 ]
Bphyt_5953 cationic amino acid ABC transporter, periplasmic binding protein [KO:K10013 ]
Bphyt_5753 ABC branched chain amino acid family transporter, periplasmic ligand binding protein [KO:K01999 ]
Bphyt_1337 ABC branched chain amino acid family transporter, periplasmic ligand binding protein [KO:K01999 ]
Bphyt_6574 ABC branched chain amino acid family transporter, periplasmic ligand binding protein [KO:K01999 ]
Bphyt_0968 ABC branched chain amino acid family transporter, periplasmic ligand binding protein [KO:K01999 ]
Bphyt_4540 binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Bphyt_2987 binding-protein-dependent transport systems inner membrane component [KO:K02072 ]
Bphyt_5759 putative UreA/short-chain amide transport system substrate-binding protein precursor [KO:K11959 ]
Bphyt_0150 ABC branched chain amino acid family transporter, periplasmic ligand binding protein [KO:K11959 ]
Bphyt_4436 binding-protein-dependent transport systems inner membrane component [KO:K15582 ]
Bphyt_3752 binding-protein-dependent transport systems inner membrane component [KO:K12370 ]
Bphyt_3129 binding-protein-dependent transport systems inner membrane component [KO:K13890 ]
Bphyt_3128 binding-protein-dependent transport systems inner membrane component [KO:K13891 ]
Bphyt_1449 binding-protein-dependent transport systems inner membrane component [KO:K13894 ]
Bphyt_2500 binding-protein-dependent transport systems inner membrane component [KO:K13894 ]
Bphyt_1450 binding-protein-dependent transport systems inner membrane component [KO:K13895 ]
Bphyt_2499 binding-protein-dependent transport systems inner membrane component [KO:K13895 ]
Bphyt_2567 lipoprotein releasing system, transmembrane protein, LolC/E family [KO:K09808 ]
Bphyt_2566 lipoprotein releasing system, ATP-binding protein [KO:K09810 ] [EC:7.6.2.-]
Bphyt_4002 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter [KO:K11004 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
LinkDB
All DBs