KEGG   PATHWAY: cic00195
Entry
cic00195                    Pathway                                
Name
Photosynthesis - Citrus x clementina (clementine)
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
cic00195  Photosynthesis
cic00195

Organism
Citrus x clementina (clementine) [GN:cic]
Gene
CICLE_v10023978mg  hypothetical protein [KO:K02703] [EC:1.10.3.9]
CICLE_v10026034mg  hypothetical protein [KO:K02716]
CICLE_v10032502mg  hypothetical protein [KO:K02717]
CICLE_v10032564mg  hypothetical protein [KO:K02717]
CICLE_v10033819mg  hypothetical protein [KO:K08901]
CICLE_v10009429mg  hypothetical protein [KO:K08901]
CICLE_v10016525mg  hypothetical protein [KO:K08901]
CICLE_v10022793mg  hypothetical protein [KO:K03541]
CICLE_v10002099mg  hypothetical protein [KO:K03542]
CICLE_v10024455mg  hypothetical protein [KO:K02721]
CICLE_v10029551mg  hypothetical protein [KO:K02721]
CICLE_v10022422mg  hypothetical protein [KO:K02723]
CICLE_v10032789mg  hypothetical protein [KO:K02723]
CICLE_v10016927mg  hypothetical protein [KO:K08902]
CICLE_v10022322mg  hypothetical protein [KO:K08903]
CICLE_v10005892mg  hypothetical protein [KO:K02692]
CICLE_v10022248mg  hypothetical protein [KO:K02692]
CICLE_v10022750mg  hypothetical protein [KO:K02693]
CICLE_v10016540mg  hypothetical protein [KO:K02694]
CICLE_v10009769mg  hypothetical protein [KO:K08905]
CICLE_v10026722mg  hypothetical protein [KO:K02695]
CICLE_v10017170mg  hypothetical protein [KO:K02698]
CICLE_v10016637mg  hypothetical protein [KO:K02699]
CICLE_v10002687mg  hypothetical protein [KO:K02701]
CICLE_v10029515mg  hypothetical protein [KO:K14332]
CICLE_v10003393mg  hypothetical protein [KO:K02635]
CICLE_v100167062m  hypothetical protein [KO:K02636] [EC:7.1.1.6]
CICLE_v10003610mg  hypothetical protein [KO:K02637]
CICLE_v10002698mg  hypothetical protein [KO:K02638]
CICLE_v10032819mg  hypothetical protein [KO:K02639]
CICLE_v10002793mg  hypothetical protein [KO:K02639]
CICLE_v10003356mg  hypothetical protein [KO:K02639]
CICLE_v10017081mg  hypothetical protein [KO:K02639]
CICLE_v10006141mg  hypothetical protein [KO:K02639]
CICLE_v10029499mg  hypothetical protein [KO:K02639]
CICLE_v10016676mg  hypothetical protein [KO:K02639]
CICLE_v100156272m  hypothetical protein [KO:K02641] [EC:1.18.1.2]
CICLE_v100156271m  hypothetical protein [KO:K02641] [EC:1.18.1.2]
CICLE_v10027108mg  hypothetical protein [KO:K02641] [EC:1.18.1.2]
CICLE_v10017084mg  hypothetical protein [KO:K08906]
CICLE_v10015680mg  hypothetical protein [KO:K02115]
CICLE_v10008444mg  hypothetical protein [KO:K02115]
CICLE_v10021230mg  hypothetical protein [KO:K02113]
CICLE_v10002351mg  hypothetical protein [KO:K02113]
CICLE_v10009435mg  hypothetical protein [KO:K02109]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
cic00196  Photosynthesis - antenna proteins
cic00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   
LinkDB

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