KEGG   PATHWAY: cie01100
Entry
cie01100                    Pathway                                
Name
Metabolic pathways - Citrobacter sp. CRE-46
Class
Pathway map
cie01100  Metabolic pathways
cie01100

Module
cie_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:cie01100]
cie_M00002  Glycolysis, core module involving three-carbon compounds [PATH:cie01100]
cie_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cie01100]
cie_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:cie01100]
cie_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:cie01100]
cie_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:cie01100]
cie_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:cie01100]
cie_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:cie01100]
cie_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:cie01100]
cie_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cie01100]
cie_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:cie01100]
cie_M00012  Glyoxylate cycle [PATH:cie01100]
cie_M00015  Proline biosynthesis, glutamate => proline [PATH:cie01100]
cie_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:cie01100]
cie_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:cie01100]
cie_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:cie01100]
cie_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:cie01100]
cie_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:cie01100]
cie_M00021  Cysteine biosynthesis, serine => cysteine [PATH:cie01100]
cie_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:cie01100]
cie_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:cie01100]
cie_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:cie01100]
cie_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:cie01100]
cie_M00026  Histidine biosynthesis, PRPP => histidine [PATH:cie01100]
cie_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:cie01100]
cie_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:cie01100]
cie_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:cie01100]
cie_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:cie01100]
cie_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:cie01100]
cie_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:cie01100]
cie_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:cie01100]
cie_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cie01100]
cie_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:cie01100]
cie_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:cie01100]
cie_M00063  CMP-KDO biosynthesis [PATH:cie01100]
cie_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:cie01100]
cie_M00082  Fatty acid biosynthesis, initiation [PATH:cie01100]
cie_M00083  Fatty acid biosynthesis, elongation [PATH:cie01100]
cie_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:cie01100]
cie_M00087  beta-Oxidation [PATH:cie01100]
cie_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:cie01100]
cie_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:cie01100]
cie_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:cie01100]
cie_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:cie01100]
cie_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:cie01100]
cie_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:cie01100]
cie_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:cie01100]
cie_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:cie01100]
cie_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:cie01100]
cie_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:cie01100]
cie_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:cie01100]
cie_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:cie01100]
cie_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:cie01100]
cie_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:cie01100]
cie_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:cie01100]
cie_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:cie01100]
cie_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:cie01100]
cie_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:cie01100]
cie_M00149  Succinate dehydrogenase, prokaryotes [PATH:cie01100]
cie_M00150  Fumarate reductase, prokaryotes [PATH:cie01100]
cie_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:cie01100]
cie_M00168  CAM (Crassulacean acid metabolism), dark [PATH:cie01100]
cie_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:cie01100]
cie_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cie01100]
cie_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:cie01100]
cie_M00417  Cytochrome o ubiquinol oxidase [PATH:cie01100]
cie_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:cie01100]
cie_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:cie01100]
cie_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:cie01100]
cie_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:cie01100]
cie_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:cie01100]
cie_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:cie01100]
cie_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:cie01100]
cie_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:cie01100]
cie_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:cie01100]
cie_M00621  Glycine cleavage system [PATH:cie01100]
cie_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:cie01100]
cie_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:cie01100]
cie_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:cie01100]
cie_M00793  dTDP-L-rhamnose biosynthesis [PATH:cie01100]
cie_M00844  Arginine biosynthesis, ornithine => arginine [PATH:cie01100]
cie_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:cie01100]
cie_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:cie01100]
cie_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:cie01100]
cie_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:cie01100]
cie_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:cie01100]
cie_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:cie01100]
cie_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:cie01100]
cie_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:cie01100]
cie_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:cie01100]
cie_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cie01100]
cie_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:cie01100]
cie_M00970  Proline degradation, proline => glutamate [PATH:cie01100]
Organism
Citrobacter sp. CRE-46 [GN:cie]
Related
pathway
cie00010  Glycolysis / Gluconeogenesis
cie00020  Citrate cycle (TCA cycle)
cie00030  Pentose phosphate pathway
cie00040  Pentose and glucuronate interconversions
cie00051  Fructose and mannose metabolism
cie00052  Galactose metabolism
cie00053  Ascorbate and aldarate metabolism
cie00061  Fatty acid biosynthesis
cie00071  Fatty acid degradation
cie00074  Mycolic acid biosynthesis
cie00130  Ubiquinone and other terpenoid-quinone biosynthesis
cie00190  Oxidative phosphorylation
cie00220  Arginine biosynthesis
cie00230  Purine metabolism
cie00240  Pyrimidine metabolism
cie00250  Alanine, aspartate and glutamate metabolism
cie00260  Glycine, serine and threonine metabolism
cie00261  Monobactam biosynthesis
cie00270  Cysteine and methionine metabolism
cie00280  Valine, leucine and isoleucine degradation
cie00290  Valine, leucine and isoleucine biosynthesis
cie00300  Lysine biosynthesis
cie00310  Lysine degradation
cie00330  Arginine and proline metabolism
cie00332  Carbapenem biosynthesis
cie00340  Histidine metabolism
cie00350  Tyrosine metabolism
cie00360  Phenylalanine metabolism
cie00361  Chlorocyclohexane and chlorobenzene degradation
cie00362  Benzoate degradation
cie00364  Fluorobenzoate degradation
cie00380  Tryptophan metabolism
cie00400  Phenylalanine, tyrosine and tryptophan biosynthesis
cie00401  Novobiocin biosynthesis
cie00410  beta-Alanine metabolism
cie00430  Taurine and hypotaurine metabolism
cie00440  Phosphonate and phosphinate metabolism
cie00450  Selenocompound metabolism
cie00460  Cyanoamino acid metabolism
cie00470  D-Amino acid metabolism
cie00480  Glutathione metabolism
cie00500  Starch and sucrose metabolism
cie00511  Other glycan degradation
cie00520  Amino sugar and nucleotide sugar metabolism
cie00521  Streptomycin biosynthesis
cie00523  Polyketide sugar unit biosynthesis
cie00525  Acarbose and validamycin biosynthesis
cie00540  Lipopolysaccharide biosynthesis
cie00541  O-Antigen nucleotide sugar biosynthesis
cie00542  O-Antigen repeat unit biosynthesis
cie00543  Exopolysaccharide biosynthesis
cie00550  Peptidoglycan biosynthesis
cie00552  Teichoic acid biosynthesis
cie00561  Glycerolipid metabolism
cie00562  Inositol phosphate metabolism
cie00564  Glycerophospholipid metabolism
cie00565  Ether lipid metabolism
cie00592  alpha-Linolenic acid metabolism
cie00600  Sphingolipid metabolism
cie00620  Pyruvate metabolism
cie00621  Dioxin degradation
cie00622  Xylene degradation
cie00623  Toluene degradation
cie00625  Chloroalkane and chloroalkene degradation
cie00626  Naphthalene degradation
cie00627  Aminobenzoate degradation
cie00630  Glyoxylate and dicarboxylate metabolism
cie00633  Nitrotoluene degradation
cie00640  Propanoate metabolism
cie00650  Butanoate metabolism
cie00660  C5-Branched dibasic acid metabolism
cie00670  One carbon pool by folate
cie00680  Methane metabolism
cie00710  Carbon fixation by Calvin cycle
cie00720  Other carbon fixation pathways
cie00730  Thiamine metabolism
cie00740  Riboflavin metabolism
cie00750  Vitamin B6 metabolism
cie00760  Nicotinate and nicotinamide metabolism
cie00770  Pantothenate and CoA biosynthesis
cie00780  Biotin metabolism
cie00785  Lipoic acid metabolism
cie00790  Folate biosynthesis
cie00860  Porphyrin metabolism
cie00900  Terpenoid backbone biosynthesis
cie00907  Pinene, camphor and geraniol degradation
cie00910  Nitrogen metabolism
cie00920  Sulfur metabolism
cie00930  Caprolactam degradation
cie00946  Degradation of flavonoids
cie00999  Biosynthesis of various plant secondary metabolites
cie01040  Biosynthesis of unsaturated fatty acids
cie01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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