Entry
Name
ABC transporters - Comamonas thiooxydans
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Comamonas thiooxydans [GN:
ctt ]
Gene
CtCNB1_1394 glycine betaine/L-proline transportsystem permease protein proW [KO:K02001 ]
CtCNB1_0788 SN-glycerol-3-phosphate transport systempermease protein ugpA [KO:K05814 ]
CtCNB1_0787 SN-glycerol-3-phosphate transport systempermease protein ugpE [KO:K05815 ]
CtCNB1_0889 High-affinity branched-chain amino acidtransport system permease protein livH [KO:K01997 ]
CtCNB1_4326 High-affinity branched-chain amino acidtransport system permease protein livH [KO:K01997 ]
CtCNB1_2166 High-affinity branched-chain amino acidtransport system permease protein livH [KO:K01997 ]
CtCNB1_0890 High-affinity branched-chain amino acidtransport system permease protein livM [KO:K01998 ]
CtCNB1_2165 High-affinity branched-chain amino acidtransport system permease protein livM [KO:K01998 ]
CtCNB1_0891 high-affinity branched-chain amino acidtransport ATP-binding protein livG [KO:K01995 ]
CtCNB1_1220 high-affinity branched-chain amino acidtransport ATP-binding protein livG [KO:K01995 ]
CtCNB1_1081 high-affinity branched-chain amino acidtransport ATP-binding protein [KO:K01995 ]
CtCNB1_2956 high-affinity branched-chain amino acidtransport ATP-binding protein livG [KO:K01995 ]
CtCNB1_4325 high-affinity branched-chain amino acid transport ATP-binding protein livG [KO:K01995 ]
CtCNB1_0093 high-affinity branched-chain amino acidtransport ATP-binding protein livF [KO:K01995 ]
CtCNB1_0231 high-affinity branched-chain amino acidtransport ATP-binding protein livG [KO:K01995 ]
CtCNB1_1144 high-affinity branched-chain amino acidtransport ATP-binding protein livG [KO:K01995 ]
CtCNB1_2164 high-affinity branched-chain amino acidtransport ATP-binding protein livG [KO:K01995 ]
CtCNB1_1143 high-affinity branched-chain amino acidtransport ATP-binding protein livF [KO:K01996 ]
CtCNB1_0892 high-affinity branched-chain amino acidtransport ATP-binding protein livF [KO:K01996 ]
CtCNB1_1082 high-affinity branched-chain amino acidtransport ATP-binding protein livF [KO:K01996 ]
CtCNB1_1221 high-affinity branched-chain amino acidtransport ATP-binding protein livF [KO:K01996 ]
CtCNB1_0230 high-affinity branched-chain amino acidtransport ATP-binding protein livF [KO:K01996 ]
CtCNB1_0092 high-affinity branched-chain amino acidtransport ATP-binding protein livF [KO:K01996 ]
CtCNB1_4329 high-affinity branched-chain amino acid transport ATP-binding protein livF [KO:K01996 ]
CtCNB1_2955 ATP-binding protein of branched-chainamino acid ABC transporter [KO:K01996 ]
CtCNB1_2163 high-affinity branched-chain amino acidtransport ATP-binding protein livF [KO:K01996 ]
CtCNB1_0845 Lipoprotein releasing systemATP-binding protein lolD [KO:K09810 ] [EC:7.6.2.-]
CtCNB1_3696 hypothetical ABC transporter ATP-binding protein Rv1348/MT1390 [KO:K14698 ] [EC:7.-.-.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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