PATHWAY: dic01100 Help Entry dic01100                    Pathway                                 Name Metabolic pathways - Dickeya poaceiphila Class BRITE hierarchy Pathway map dic01100   Metabolic pathways Module dic_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dic01100] dic_M00002   Glycolysis, core module involving three-carbon compounds [PATH:dic01100] dic_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dic01100] dic_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:dic01100] dic_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:dic01100] dic_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:dic01100] dic_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dic01100] dic_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:dic01100] dic_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dic01100] dic_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dic01100] dic_M00012   Glyoxylate cycle [PATH:dic01100] dic_M00015   Proline biosynthesis, glutamate => proline [PATH:dic01100] dic_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:dic01100] dic_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:dic01100] dic_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:dic01100] dic_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dic01100] dic_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:dic01100] dic_M00021   Cysteine biosynthesis, serine => cysteine [PATH:dic01100] dic_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dic01100] dic_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:dic01100] dic_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:dic01100] dic_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:dic01100] dic_M00026   Histidine biosynthesis, PRPP => histidine [PATH:dic01100] dic_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:dic01100] dic_M00034   Methionine salvage pathway [PATH:dic01100] dic_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:dic01100] dic_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dic01100] dic_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dic01100] dic_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dic01100] dic_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:dic01100] dic_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dic01100] dic_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dic01100] dic_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:dic01100] dic_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:dic01100] dic_M00063   CMP-KDO biosynthesis [PATH:dic01100] dic_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:dic01100] dic_M00082   Fatty acid biosynthesis, initiation [PATH:dic01100] dic_M00083   Fatty acid biosynthesis, elongation [PATH:dic01100] dic_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:dic01100] dic_M00087   beta-Oxidation [PATH:dic01100] dic_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dic01100] dic_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:dic01100] dic_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:dic01100] dic_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:dic01100] dic_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:dic01100] dic_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:dic01100] dic_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:dic01100] dic_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dic01100] dic_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:dic01100] dic_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:dic01100] dic_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:dic01100] dic_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:dic01100] dic_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:dic01100] dic_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:dic01100] dic_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:dic01100] dic_M00149   Succinate dehydrogenase, prokaryotes [PATH:dic01100] dic_M00150   Fumarate reductase, prokaryotes [PATH:dic01100] dic_M00168   CAM (Crassulacean acid metabolism), dark [PATH:dic01100] dic_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:dic01100] dic_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dic01100] dic_M00417   Cytochrome o ubiquinol oxidase [PATH:dic01100] dic_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dic01100] dic_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:dic01100] dic_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:dic01100] dic_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:dic01100] dic_M00555   Betaine biosynthesis, choline => betaine [PATH:dic01100] dic_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dic01100] dic_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:dic01100] dic_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:dic01100] dic_M00621   Glycine cleavage system [PATH:dic01100] dic_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:dic01100] dic_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:dic01100] dic_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:dic01100] dic_M00793   dTDP-L-rhamnose biosynthesis [PATH:dic01100] dic_M00844   Arginine biosynthesis, ornithine => arginine [PATH:dic01100] dic_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:dic01100] dic_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:dic01100] dic_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:dic01100] dic_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:dic01100] dic_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dic01100] dic_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:dic01100] dic_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dic01100] dic_M00970   Proline degradation, proline => glutamate [PATH:dic01100] Organism Dickeya poaceiphila [GN:dic] Related pathway dic00010   Glycolysis / Gluconeogenesis dic00020   Citrate cycle (TCA cycle) dic00030   Pentose phosphate pathway dic00040   Pentose and glucuronate interconversions dic00051   Fructose and mannose metabolism dic00052   Galactose metabolism dic00053   Ascorbate and aldarate metabolism dic00061   Fatty acid biosynthesis dic00071   Fatty acid degradation dic00130   Ubiquinone and other terpenoid-quinone biosynthesis dic00190   Oxidative phosphorylation dic00220   Arginine biosynthesis dic00230   Purine metabolism dic00240   Pyrimidine metabolism dic00250   Alanine, aspartate and glutamate metabolism dic00260   Glycine, serine and threonine metabolism dic00261   Monobactam biosynthesis dic00270   Cysteine and methionine metabolism dic00280   Valine, leucine and isoleucine degradation dic00290   Valine, leucine and isoleucine biosynthesis dic00300   Lysine biosynthesis dic00310   Lysine degradation dic00330   Arginine and proline metabolism dic00332   Carbapenem biosynthesis dic00340   Histidine metabolism dic00350   Tyrosine metabolism dic00360   Phenylalanine metabolism dic00361   Chlorocyclohexane and chlorobenzene degradation dic00362   Benzoate degradation dic00364   Fluorobenzoate degradation dic00380   Tryptophan metabolism dic00400   Phenylalanine, tyrosine and tryptophan biosynthesis dic00401   Novobiocin biosynthesis dic00410   beta-Alanine metabolism dic00430   Taurine and hypotaurine metabolism dic00440   Phosphonate and phosphinate metabolism dic00450   Selenocompound metabolism dic00460   Cyanoamino acid metabolism dic00470   D-Amino acid metabolism dic00480   Glutathione metabolism dic00500   Starch and sucrose metabolism dic00511   Other glycan degradation dic00520   Amino sugar and nucleotide sugar metabolism dic00521   Streptomycin biosynthesis dic00523   Polyketide sugar unit biosynthesis dic00525   Acarbose and validamycin biosynthesis dic00540   Lipopolysaccharide biosynthesis dic00541   O-Antigen nucleotide sugar biosynthesis dic00542   O-Antigen repeat unit biosynthesis dic00543   Exopolysaccharide biosynthesis dic00550   Peptidoglycan biosynthesis dic00552   Teichoic acid biosynthesis dic00561   Glycerolipid metabolism dic00562   Inositol phosphate metabolism dic00564   Glycerophospholipid metabolism dic00565   Ether lipid metabolism dic00592   alpha-Linolenic acid metabolism dic00600   Sphingolipid metabolism dic00620   Pyruvate metabolism dic00623   Toluene degradation dic00625   Chloroalkane and chloroalkene degradation dic00626   Naphthalene degradation dic00627   Aminobenzoate degradation dic00630   Glyoxylate and dicarboxylate metabolism dic00633   Nitrotoluene degradation dic00640   Propanoate metabolism dic00650   Butanoate metabolism dic00660   C5-Branched dibasic acid metabolism dic00670   One carbon pool by folate dic00680   Methane metabolism dic00710   Carbon fixation by Calvin cycle dic00720   Other carbon fixation pathways dic00730   Thiamine metabolism dic00740   Riboflavin metabolism dic00750   Vitamin B6 metabolism dic00760   Nicotinate and nicotinamide metabolism dic00770   Pantothenate and CoA biosynthesis dic00780   Biotin metabolism dic00785   Lipoic acid metabolism dic00790   Folate biosynthesis dic00791   Atrazine degradation dic00860   Porphyrin metabolism dic00900   Terpenoid backbone biosynthesis dic00907   Pinene, camphor and geraniol degradation dic00910   Nitrogen metabolism dic00920   Sulfur metabolism dic00930   Caprolactam degradation dic00946   Degradation of flavonoids dic00997   Biosynthesis of various other secondary metabolites dic00998   Biosynthesis of various antibiotics dic00999   Biosynthesis of various plant secondary metabolites dic01040   Biosynthesis of unsaturated fatty acids dic01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway 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