KEGG   PATHWAY: dic00010
Entry
dic00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Dickeya poaceiphila
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dic00010  Glycolysis / Gluconeogenesis
dic00010

Module
dic_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dic00010]
dic_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dic00010]
dic_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dic00010]
dic_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dic00010]
Other DBs
GO: 0006096 0006094
Organism
Dickeya poaceiphila [GN:dic]
Gene
Dpoa569_003857  glucokinase [KO:K00845] [EC:2.7.1.2]
Dpoa569_000452  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
Dpoa569_000151  pfkA; 6-phosphofructokinase [KO:K00850] [EC:2.7.1.11]
Dpoa569_000497  class 1 fructose-bisphosphatase [KO:K03841] [EC:3.1.3.11]
Dpoa569_000159  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
Dpoa569_000511  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
Dpoa569_000155  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
Dpoa569_002004  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
Dpoa569_000510  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
Dpoa569_002513  gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase [KO:K01834] [EC:5.4.2.11]
Dpoa569_000525  gpmB; phosphoglycerate mutase GpmB [KO:K15634] [EC:5.4.2.11]
Dpoa569_000788  phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
Dpoa569_002023  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
Dpoa569_001571  pykF; pyruvate kinase PykF [KO:K00873] [EC:2.7.1.40]
Dpoa569_001561  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
Dpoa569_000627  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
Dpoa569_000628  aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase [KO:K00627] [EC:2.3.1.12]
Dpoa569_000629  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Dpoa569_003221  nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Dpoa569_002169  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
Dpoa569_001984  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
Dpoa569_001715  yiaY; L-threonine dehydrogenase [KO:K13954] [EC:1.1.1.1]
Dpoa569_003834  aldehyde dehydrogenase [KO:K00138] [EC:1.2.1.-]
Dpoa569_003253  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
Dpoa569_002511  galM; galactose-1-epimerase [KO:K01785] [EC:5.1.3.3]
Dpoa569_000032  yihX; glucose-1-phosphatase [KO:K20866] [EC:3.1.3.10]
Dpoa569_002557  alpha-D-glucose phosphate-specific phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
Dpoa569_002005  D-hexose-6-phosphate mutarotase [KO:K01792] [EC:5.1.3.15]
Dpoa569_000341  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
Dpoa569_000696  glycoside hydrolase family 1 protein [KO:K01223] [EC:3.2.1.86]
Dpoa569_001574  ascB; 6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
Dpoa569_003570  6-phospho-beta-glucosidase [KO:K01223] [EC:3.2.1.86]
Dpoa569_003148  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
Dpoa569_001505  ptsG; PTS glucose transporter subunit IIBC [KO:K02779] [EC:2.7.1.199]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dic00020  Citrate cycle (TCA cycle)
dic00030  Pentose phosphate pathway
dic00500  Starch and sucrose metabolism
dic00620  Pyruvate metabolism
dic00640  Propanoate metabolism
dic00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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