PATHWAY: dja01100 Help Entry dja01100                    Pathway                                 Name Metabolic pathways - Dyella japonica Class BRITE hierarchy Pathway map dja01100   Metabolic pathways Module dja_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dja01100] dja_M00002   Glycolysis, core module involving three-carbon compounds [PATH:dja01100] dja_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dja01100] dja_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:dja01100] dja_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:dja01100] dja_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:dja01100] dja_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:dja01100] dja_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:dja01100] dja_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:dja01100] dja_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:dja01100] dja_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:dja01100] dja_M00012   Glyoxylate cycle [PATH:dja01100] dja_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:dja01100] dja_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:dja01100] dja_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:dja01100] dja_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:dja01100] dja_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:dja01100] dja_M00026   Histidine biosynthesis, PRPP => histidine [PATH:dja01100] dja_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:dja01100] dja_M00034   Methionine salvage pathway [PATH:dja01100] dja_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:dja01100] dja_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:dja01100] dja_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:dja01100] dja_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:dja01100] dja_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:dja01100] dja_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:dja01100] dja_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:dja01100] dja_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:dja01100] dja_M00063   CMP-KDO biosynthesis [PATH:dja01100] dja_M00082   Fatty acid biosynthesis, initiation [PATH:dja01100] dja_M00083   Fatty acid biosynthesis, elongation [PATH:dja01100] dja_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:dja01100] dja_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:dja01100] dja_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:dja01100] dja_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:dja01100] dja_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:dja01100] dja_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:dja01100] dja_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:dja01100] dja_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:dja01100] dja_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:dja01100] dja_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:dja01100] dja_M00149   Succinate dehydrogenase, prokaryotes [PATH:dja01100] dja_M00151   Cytochrome bc1 complex respiratory unit [PATH:dja01100] dja_M00155   Cytochrome c oxidase, prokaryotes [PATH:dja01100] dja_M00156   Cytochrome c oxidase, cbb3-type [PATH:dja01100] dja_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:dja01100] dja_M00168   CAM (Crassulacean acid metabolism), dark [PATH:dja01100] dja_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:dja01100] dja_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dja01100] dja_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:dja01100] dja_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:dja01100] dja_M00417   Cytochrome o ubiquinol oxidase [PATH:dja01100] dja_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:dja01100] dja_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:dja01100] dja_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:dja01100] dja_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:dja01100] dja_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:dja01100] dja_M00621   Glycine cleavage system [PATH:dja01100] dja_M00793   dTDP-L-rhamnose biosynthesis [PATH:dja01100] dja_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:dja01100] dja_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:dja01100] dja_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:dja01100] dja_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:dja01100] dja_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:dja01100] dja_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:dja01100] dja_M00970   Proline degradation, proline => glutamate [PATH:dja01100] Organism Dyella japonica [GN:dja] Related pathway dja00010   Glycolysis / Gluconeogenesis dja00020   Citrate cycle (TCA cycle) dja00030   Pentose phosphate pathway dja00040   Pentose and glucuronate interconversions dja00051   Fructose and mannose metabolism dja00052   Galactose metabolism dja00053   Ascorbate and aldarate metabolism dja00061   Fatty acid biosynthesis dja00071   Fatty acid degradation dja00130   Ubiquinone and other terpenoid-quinone biosynthesis dja00190   Oxidative phosphorylation dja00220   Arginine biosynthesis dja00230   Purine metabolism dja00240   Pyrimidine metabolism dja00250   Alanine, aspartate and glutamate metabolism dja00260   Glycine, serine and threonine metabolism dja00261   Monobactam biosynthesis dja00270   Cysteine and methionine metabolism dja00280   Valine, leucine and isoleucine degradation dja00290   Valine, leucine and isoleucine biosynthesis dja00300   Lysine biosynthesis dja00310   Lysine degradation dja00311   Penicillin and cephalosporin biosynthesis dja00330   Arginine and proline metabolism dja00340   Histidine metabolism dja00350   Tyrosine metabolism dja00360   Phenylalanine metabolism dja00361   Chlorocyclohexane and chlorobenzene degradation dja00362   Benzoate degradation dja00364   Fluorobenzoate degradation dja00380   Tryptophan metabolism dja00400   Phenylalanine, tyrosine and tryptophan biosynthesis dja00401   Novobiocin biosynthesis dja00410   beta-Alanine metabolism dja00430   Taurine and hypotaurine metabolism dja00450   Selenocompound metabolism dja00460   Cyanoamino acid metabolism dja00470   D-Amino acid metabolism dja00480   Glutathione metabolism dja00500   Starch and sucrose metabolism dja00511   Other glycan degradation dja00520   Amino sugar and nucleotide sugar metabolism dja00521   Streptomycin biosynthesis dja00523   Polyketide sugar unit biosynthesis dja00525   Acarbose and validamycin biosynthesis dja00540   Lipopolysaccharide biosynthesis dja00541   O-Antigen nucleotide sugar biosynthesis dja00542   O-Antigen repeat unit biosynthesis dja00543   Exopolysaccharide biosynthesis dja00550   Peptidoglycan biosynthesis dja00552   Teichoic acid biosynthesis dja00561   Glycerolipid metabolism dja00562   Inositol phosphate metabolism dja00564   Glycerophospholipid metabolism dja00565   Ether lipid metabolism dja00590   Arachidonic acid metabolism dja00592   alpha-Linolenic acid metabolism dja00600   Sphingolipid metabolism dja00620   Pyruvate metabolism dja00622   Xylene degradation dja00623   Toluene degradation dja00625   Chloroalkane and chloroalkene degradation dja00626   Naphthalene degradation dja00630   Glyoxylate and dicarboxylate metabolism dja00633   Nitrotoluene degradation dja00640   Propanoate metabolism dja00643   Styrene degradation dja00650   Butanoate metabolism dja00660   C5-Branched dibasic acid metabolism dja00670   One carbon pool by folate dja00680   Methane metabolism dja00710   Carbon fixation by Calvin cycle dja00720   Other carbon fixation pathways dja00730   Thiamine metabolism dja00740   Riboflavin metabolism dja00750   Vitamin B6 metabolism dja00760   Nicotinate and nicotinamide metabolism dja00770   Pantothenate and CoA biosynthesis dja00780   Biotin metabolism dja00785   Lipoic acid metabolism dja00790   Folate biosynthesis dja00860   Porphyrin metabolism dja00900   Terpenoid backbone biosynthesis dja00903   Limonene degradation dja00906   Carotenoid biosynthesis dja00907   Pinene, camphor and geraniol degradation dja00909   Sesquiterpenoid and triterpenoid biosynthesis dja00910   Nitrogen metabolism dja00920   Sulfur metabolism dja00946   Degradation of flavonoids dja00999   Biosynthesis of various plant secondary metabolites dja01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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