KEGG   PATHWAY: dja00010
Entry
dja00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Dyella japonica
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dja00010  Glycolysis / Gluconeogenesis
dja00010

Module
dja_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dja00010]
dja_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dja00010]
dja_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dja00010]
dja_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dja00010]
Other DBs
GO: 0006096 0006094
Organism
Dyella japonica [GN:dja]
Gene
HY57_02190  glucokinase [KO:K00845] [EC:2.7.1.2]
HY57_01195  hypothetical protein [KO:K00845] [EC:2.7.1.2]
HY57_02400  glucokinase [KO:K00845] [EC:2.7.1.2]
HY57_02440  glucokinase [KO:K00845] [EC:2.7.1.2]
HY57_17555  glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
HY57_00075  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
HY57_03190  fructose 1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
HY57_20140  fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
HY57_09745  fructose-bisphosphate aldolase [KO:K11645] [EC:4.1.2.13]
HY57_11925  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
HY57_20170  gapA; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
HY57_20115  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
HY57_04180  gpmA; phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
HY57_14895  eno; enolase [KO:K01689] [EC:4.2.1.11]
HY57_20150  pyruvate kinase [KO:K00873] [EC:2.7.1.40]
HY57_14495  phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
HY57_05385  aceE; pyruvate dehydrogenase [KO:K00163] [EC:1.2.4.1]
HY57_05500  dihydrolipoamide acetyltransferase [KO:K00627] [EC:2.3.1.12]
HY57_05505  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
HY57_11105  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
HY57_12100  S-(hydroxymethyl)glutathione dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
HY57_16520  alcohol dehydrogenase [KO:K13953] [EC:1.1.1.1]
HY57_19430  alcohol dehydrogenase [KO:K12957] [EC:1.1.1.2 1.1.1.183]
HY57_14280  hydroxyacid dehydrogenase [KO:K13979] [EC:1.1.1.2]
HY57_03310  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
HY57_02695  aldose epimerase [KO:K01785] [EC:5.1.3.3]
HY57_00025  hypothetical protein [KO:K20866] [EC:3.1.3.10]
HY57_13875  phosphoglucomutase [KO:K01835] [EC:5.4.2.2]
HY57_02855  phosphoglucomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
HY57_20075  phosphomannomutase [KO:K15778] [EC:5.4.2.8 5.4.2.2]
HY57_19820  phosphoenolpyruvate carboxykinase [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dja00020  Citrate cycle (TCA cycle)
dja00030  Pentose phosphate pathway
dja00500  Starch and sucrose metabolism
dja00620  Pyruvate metabolism
dja00640  Propanoate metabolism
dja00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system