KEGG   PATHWAY: dpu03440
Entry
dpu03440                    Pathway                                
Name
Homologous recombination - Deinococcus puniceus
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
dpu03440  Homologous recombination
dpu03440

Other DBs
GO: 0000724
Organism
Deinococcus puniceus [GN:dpu]
Gene
SU48_09500  single-stranded DNA exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
SU48_02450  single-stranded DNA-binding protein [KO:K03111]
SU48_05910  DNA recombination protein RecF [KO:K03629]
SU48_09450  DNA recombination protein RecO [KO:K03584]
SU48_10215  recombinase RecR [KO:K06187]
SU48_00895  recombinase RecA [KO:K03553]
SU48_09850  DNA polymerase I [KO:K02335] [EC:2.7.7.7]
SU48_09660  ruvA; ATP-dependent DNA helicase RuvA [KO:K03550]
SU48_02545  ATP-dependent DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
SU48_13390  crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
SU48_06275  ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
SU48_08180  ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
SU48_10005  exodeoxyribonuclease V [KO:K03581] [EC:3.1.11.5]
SU48_01730  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
SU48_00445  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
SU48_13145  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
SU48_06990  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
SU48_00415  DNA polymerase III [KO:K02341] [EC:2.7.7.7]
SU48_04150  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
SU48_02255  exonuclease [KO:K02342] [EC:2.7.7.7]
SU48_11735  primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
LinkDB

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