KEGG   PATHWAY: ecb03060
Entry
ecb03060                    Pathway                                
Name
Protein export - Equus caballus (horse)
Description
The protein export is the active transport of proteins from the cytoplasm to the exterior of the cell, or to the periplasmic compartment in Gram-negative bacteria. The sec dependent pathway is the general protein export system that transports newly synthesized proteins into or across the cell membrane. The translocation channel is formed from a conserved trimeric membrane protein complex, called the Sec61/SecY complex. The twin-arginine translocation (Tat) pathway is another protein transport system that transports folded proteins in bacteria, archaea, and chloroplasts. Many Tat systems comprise three functionally different membrane proteins, TatA, TatB, and TatC, but TatA and TatE seem to have overlapping functions, with TatA having by far the more important role.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
ecb03060  Protein export
ecb03060

Other DBs
GO: 0043952 0043953
Organism
Equus caballus (horse) [GN:ecb]
Gene
100056354  OXA1L; LOW QUALITY PROTEIN: mitochondrial inner membrane protein OXA1L [KO:K03217]
100050647  SRP54; signal recognition particle 54 kDa protein [KO:K03106] [EC:3.6.5.4]
100069336  SEC61A2; protein transport protein Sec61 subunit alpha isoform X1 [KO:K10956]
100054080  SEC61A1; protein transport protein Sec61 subunit alpha [KO:K10956]
100630021  SEC61B; protein transport protein Sec61 subunit beta [KO:K09481]
100629979  SEC61G; protein transport protein Sec61 subunit gamma [KO:K07342]
100063496  SEC62; translocation protein SEC62 [KO:K12275]
100072096  SEC63; translocation protein SEC63 homolog [KO:K09540]
100067235  HSPA5; 78 kDa glucose-regulated protein [KO:K09490] [EC:3.6.4.10]
100630023  SRP9; signal recognition particle 9 kDa protein [KO:K03109]
100057403  SRP14; signal recognition particle 14 kDa protein [KO:K03104]
100053755  SRP72; signal recognition particle subunit SRP72 [KO:K03108]
100051325  SRP68; signal recognition particle subunit SRP68 [KO:K03107]
100073184  SRP19; signal recognition particle 19 kDa protein [KO:K03105]
100072446  SRPRA; signal recognition particle receptor subunit alpha [KO:K13431]
100629957  SRPRB; signal recognition particle receptor subunit beta [KO:K12272]
100063417  ASNA1; ATPase ASNA1 [KO:K01551] [EC:7.3.2.7 7.3.-.-]
100054023  GET4; Golgi to ER traffic protein 4 homolog isoform X1 [KO:K23387]
100059665  UBL4A; ubiquitin-like protein 4A [KO:K23388]
100062023  UBL4B; ubiquitin-like protein 4B [KO:K23388]
100050296  BAG6; large proline-rich protein BAG6 isoform X5 [KO:K23390]
100059698  SGTA; small glutamine-rich tetratricopeptide repeat-containing protein alpha isoform X1 [KO:K16365]
100059393  WRB; tail-anchored protein insertion receptor WRB [KO:K22384]
100053269  TMEM208; transmembrane protein 208 [KO:K27164]
100629294  SPCS1; signal peptidase complex subunit 1 [KO:K12946] [EC:3.4.-.-]
111771225  signal peptidase complex subunit 1 [KO:K12946] [EC:3.4.-.-]
100051902  SPCS2; signal peptidase complex subunit 2 [KO:K12947] [EC:3.4.-.-]
100629176  SPCS3; signal peptidase complex subunit 3 [KO:K12948] [EC:3.4.-.-]
100054810  SEC11C; signal peptidase complex catalytic subunit SEC11C isoform X1 [KO:K13280] [EC:3.4.21.89]
100053244  SEC11A; signal peptidase complex catalytic subunit SEC11A isoform X4 [KO:K13280] [EC:3.4.21.89]
100057660  IMMP1L; mitochondrial inner membrane protease subunit 1 [KO:K09647] [EC:3.4.21.-]
100146231  IMMP2L; mitochondrial inner membrane protease subunit 2 isoform X3 [KO:K09648] [EC:3.4.21.-]
Reference
  Authors
Dalbey RE, Robinson C.
  Title
Protein translocation into and across the bacterial plasma membrane and the plant thylakoid membrane.
  Journal
Trends Biochem Sci 24:17-22 (1999)
DOI:10.1016/S0968-0004(98)01333-4
Reference
  Authors
Berks BC, Sargent F, Palmer T.
  Title
The Tat protein export pathway.
  Journal
Mol Microbiol 35:260-74 (2000)
DOI:10.1046/j.1365-2958.2000.01719.x
Reference
  Authors
Wexler M, Sargent F, Jack RL, Stanley NR, Bogsch EG, Robinson C, Berks BC, Palmer T.
  Title
TatD is a cytoplasmic protein with DNase activity. No requirement for TatD family proteins in sec-independent protein export.
  Journal
J Biol Chem 275:16717-22 (2000)
DOI:10.1074/jbc.M000800200
Reference
  Authors
Jongbloed JD, Martin U, Antelmann H, Hecker M, Tjalsma H, Venema G, Bron S, van Dijl JM, Muller J.
  Title
TatC is a specificity determinant for protein secretion via the twin-arginine translocation pathway.
  Journal
J Biol Chem 275:41350-7 (2000)
DOI:10.1074/jbc.M004887200
Reference
  Authors
Rapoport TA
  Title
Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.
  Journal
Nature 450:663-9 (2007)
DOI:10.1038/nature06384
Reference
  Authors
Flower AM
  Title
The SecY translocation complex: convergence of genetics and structure.
  Journal
Trends Microbiol 15:203-10 (2007)
DOI:10.1016/j.tim.2007.03.001
Reference
  Authors
Osborne AR, Rapoport TA, van den Berg B
  Title
Protein translocation by the Sec61/SecY channel.
  Journal
Annu Rev Cell Dev Biol 21:529-50 (2005)
DOI:10.1146/annurev.cellbio.21.012704.133214
Reference
  Authors
Paetzel M, Karla A, Strynadka NC, Dalbey RE
  Title
Signal peptidases.
  Journal
Chem Rev 102:4549-80 (2002)
DOI:10.1021/cr010166y
Reference
  Authors
Paetzel M, Dalbey RE, Strynadka NC
  Title
The structure and mechanism of bacterial type I signal peptidases. A novel antibiotic target.
  Journal
Pharmacol Ther 87:27-49 (2000)
DOI:10.1016/S0163-7258(00)00064-4
Reference
  Authors
Ng SY, Chaban B, VanDyke DJ, Jarrell KF
  Title
Archaeal signal peptidases.
  Journal
Microbiology 153:305-14 (2007)
DOI:10.1099/mic.0.2006/003087-0
Reference
  Authors
Desvaux M, Hebraud M, Talon R, Henderson IR
  Title
Secretion and subcellular localizations of bacterial proteins: a semantic awareness issue.
  Journal
Trends Microbiol 17:139-45 (2009)
DOI:10.1016/j.tim.2009.01.004
Reference
  Authors
Nakatogawa H, Murakami A, Ito K
  Title
Control of SecA and SecM translation by protein secretion.
  Journal
Curr Opin Microbiol 7:145-50 (2004)
DOI:10.1016/j.mib.2004.01.001
KO pathway
ko03060   
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