PATHWAY: gfu01100 Help Entry gfu01100                    Pathway                                 Name Metabolic pathways - Gemmobacter fulvus Class BRITE hierarchy Pathway map gfu01100   Metabolic pathways Module gfu_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gfu01100] gfu_M00002   Glycolysis, core module involving three-carbon compounds [PATH:gfu01100] gfu_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gfu01100] gfu_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:gfu01100] gfu_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:gfu01100] gfu_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:gfu01100] gfu_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:gfu01100] gfu_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:gfu01100] gfu_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:gfu01100] gfu_M00015   Proline biosynthesis, glutamate => proline [PATH:gfu01100] gfu_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:gfu01100] gfu_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:gfu01100] gfu_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:gfu01100] gfu_M00021   Cysteine biosynthesis, serine => cysteine [PATH:gfu01100] gfu_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:gfu01100] gfu_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:gfu01100] gfu_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:gfu01100] gfu_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:gfu01100] gfu_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:gfu01100] gfu_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:gfu01100] gfu_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:gfu01100] gfu_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:gfu01100] gfu_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gfu01100] gfu_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gfu01100] gfu_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gfu01100] gfu_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gfu01100] gfu_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gfu01100] gfu_M00082   Fatty acid biosynthesis, initiation [PATH:gfu01100] gfu_M00083   Fatty acid biosynthesis, elongation [PATH:gfu01100] gfu_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:gfu01100] gfu_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:gfu01100] gfu_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:gfu01100] gfu_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:gfu01100] gfu_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:gfu01100] gfu_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:gfu01100] gfu_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:gfu01100] gfu_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:gfu01100] gfu_M00140   C1-unit interconversion, prokaryotes [PATH:gfu01100] gfu_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:gfu01100] gfu_M00149   Succinate dehydrogenase, prokaryotes [PATH:gfu01100] gfu_M00151   Cytochrome bc1 complex respiratory unit [PATH:gfu01100] gfu_M00155   Cytochrome c oxidase, prokaryotes [PATH:gfu01100] gfu_M00156   Cytochrome c oxidase, cbb3-type [PATH:gfu01100] gfu_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:gfu01100] gfu_M00169   CAM (Crassulacean acid metabolism), light [PATH:gfu01100] gfu_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gfu01100] gfu_M00373   Ethylmalonyl pathway [PATH:gfu01100] gfu_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:gfu01100] gfu_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:gfu01100] gfu_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:gfu01100] gfu_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:gfu01100] gfu_M00555   Betaine biosynthesis, choline => betaine [PATH:gfu01100] gfu_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:gfu01100] gfu_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:gfu01100] gfu_M00621   Glycine cleavage system [PATH:gfu01100] gfu_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:gfu01100] gfu_M00793   dTDP-L-rhamnose biosynthesis [PATH:gfu01100] gfu_M00844   Arginine biosynthesis, ornithine => arginine [PATH:gfu01100] gfu_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:gfu01100] gfu_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:gfu01100] gfu_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:gfu01100] gfu_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:gfu01100] gfu_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:gfu01100] gfu_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:gfu01100] gfu_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:gfu01100] gfu_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:gfu01100] gfu_M00970   Proline degradation, proline => glutamate [PATH:gfu01100] Organism Gemmobacter fulvus [GN:gfu] Related pathway gfu00010   Glycolysis / Gluconeogenesis gfu00020   Citrate cycle (TCA cycle) gfu00030   Pentose phosphate pathway gfu00040   Pentose and glucuronate interconversions gfu00051   Fructose and mannose metabolism gfu00052   Galactose metabolism gfu00053   Ascorbate and aldarate metabolism gfu00061   Fatty acid biosynthesis gfu00071   Fatty acid degradation gfu00121   Secondary bile acid biosynthesis gfu00130   Ubiquinone and other terpenoid-quinone biosynthesis gfu00190   Oxidative phosphorylation gfu00220   Arginine biosynthesis gfu00230   Purine metabolism gfu00240   Pyrimidine metabolism gfu00250   Alanine, aspartate and glutamate metabolism gfu00260   Glycine, serine and threonine metabolism gfu00261   Monobactam biosynthesis gfu00270   Cysteine and methionine metabolism gfu00280   Valine, leucine and isoleucine degradation gfu00290   Valine, leucine and isoleucine biosynthesis gfu00300   Lysine biosynthesis gfu00310   Lysine degradation gfu00311   Penicillin and cephalosporin biosynthesis gfu00330   Arginine and proline metabolism gfu00332   Carbapenem biosynthesis gfu00340   Histidine metabolism gfu00350   Tyrosine metabolism gfu00360   Phenylalanine metabolism gfu00361   Chlorocyclohexane and chlorobenzene degradation gfu00362   Benzoate degradation gfu00364   Fluorobenzoate degradation gfu00380   Tryptophan metabolism gfu00400   Phenylalanine, tyrosine and tryptophan biosynthesis gfu00401   Novobiocin biosynthesis gfu00405   Phenazine biosynthesis gfu00410   beta-Alanine metabolism gfu00430   Taurine and hypotaurine metabolism gfu00440   Phosphonate and phosphinate metabolism gfu00450   Selenocompound metabolism gfu00460   Cyanoamino acid metabolism gfu00470   D-Amino acid metabolism gfu00480   Glutathione metabolism gfu00500   Starch and sucrose metabolism gfu00520   Amino sugar and nucleotide sugar metabolism gfu00521   Streptomycin biosynthesis gfu00523   Polyketide sugar unit biosynthesis gfu00525   Acarbose and validamycin biosynthesis gfu00540   Lipopolysaccharide biosynthesis gfu00541   O-Antigen nucleotide sugar biosynthesis gfu00543   Exopolysaccharide biosynthesis gfu00550   Peptidoglycan biosynthesis gfu00552   Teichoic acid biosynthesis gfu00561   Glycerolipid metabolism gfu00562   Inositol phosphate metabolism gfu00564   Glycerophospholipid metabolism gfu00620   Pyruvate metabolism gfu00622   Xylene degradation gfu00623   Toluene degradation gfu00625   Chloroalkane and chloroalkene degradation gfu00626   Naphthalene degradation gfu00627   Aminobenzoate degradation gfu00630   Glyoxylate and dicarboxylate metabolism gfu00640   Propanoate metabolism gfu00643   Styrene degradation gfu00650   Butanoate metabolism gfu00660   C5-Branched dibasic acid metabolism gfu00670   One carbon pool by folate gfu00680   Methane metabolism gfu00710   Carbon fixation by Calvin cycle gfu00720   Other carbon fixation pathways gfu00730   Thiamine metabolism gfu00740   Riboflavin metabolism gfu00750   Vitamin B6 metabolism gfu00760   Nicotinate and nicotinamide metabolism gfu00770   Pantothenate and CoA biosynthesis gfu00780   Biotin metabolism gfu00785   Lipoic acid metabolism gfu00790   Folate biosynthesis gfu00860   Porphyrin metabolism gfu00900   Terpenoid backbone biosynthesis gfu00907   Pinene, camphor and geraniol degradation gfu00910   Nitrogen metabolism gfu00920   Sulfur metabolism gfu00930   Caprolactam degradation gfu00946   Degradation of flavonoids gfu00999   Biosynthesis of various plant secondary metabolites gfu01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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