KEGG   PATHWAY: ghi01100
Entry
ghi01100                    Pathway                                
Name
Metabolic pathways - Gossypium hirsutum (upland cotton)
Class
Pathway map
ghi01100  Metabolic pathways
ghi01100

Module
ghi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ghi01100]
ghi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ghi01100]
ghi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ghi01100]
ghi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ghi01100]
ghi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ghi01100]
ghi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ghi01100]
ghi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ghi01100]
ghi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ghi01100]
ghi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ghi01100]
ghi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ghi01100]
ghi_M00012  Glyoxylate cycle [PATH:ghi01100]
ghi_M00015  Proline biosynthesis, glutamate => proline [PATH:ghi01100]
ghi_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ghi01100]
ghi_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ghi01100]
ghi_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ghi01100]
ghi_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ghi01100]
ghi_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ghi01100]
ghi_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ghi01100]
ghi_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ghi01100]
ghi_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:ghi01100]
ghi_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ghi01100]
ghi_M00034  Methionine salvage pathway [PATH:ghi01100]
ghi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ghi01100]
ghi_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:ghi01100]
ghi_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ghi01100]
ghi_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:ghi01100]
ghi_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ghi01100]
ghi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ghi01100]
ghi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ghi01100]
ghi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ghi01100]
ghi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ghi01100]
ghi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ghi01100]
ghi_M00055  N-glycan precursor biosynthesis [PATH:ghi01100]
ghi_M00073  N-glycan precursor trimming [PATH:ghi01100]
ghi_M00081  Pectin degradation [PATH:ghi01100]
ghi_M00082  Fatty acid biosynthesis, initiation [PATH:ghi01100]
ghi_M00083  Fatty acid biosynthesis, elongation [PATH:ghi01100]
ghi_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ghi01100]
ghi_M00087  beta-Oxidation [PATH:ghi01100]
ghi_M00089  Triacylglycerol biosynthesis [PATH:ghi01100]
ghi_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:ghi01100]
ghi_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:ghi01100]
ghi_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ghi01100]
ghi_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene [PATH:ghi01100]
ghi_M00098  Acylglycerol degradation [PATH:ghi01100]
ghi_M00100  Sphingosine degradation [PATH:ghi01100]
ghi_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:ghi01100]
ghi_M00113  Jasmonic acid biosynthesis [PATH:ghi01100]
ghi_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:ghi01100]
ghi_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ghi01100]
ghi_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ghi01100]
ghi_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ghi01100]
ghi_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ghi01100]
ghi_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ghi01100]
ghi_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ghi01100]
ghi_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ghi01100]
ghi_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:ghi01100]
ghi_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:ghi01100]
ghi_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:ghi01100]
ghi_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:ghi01100]
ghi_M00143  NADH dehydrogenase (ubiquinone) Fe-S protein/flavoprotein complex, mitochondria [PATH:ghi01100]
ghi_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:ghi01100]
ghi_M00148  Succinate dehydrogenase (ubiquinone) [PATH:ghi01100]
ghi_M00151  Cytochrome bc1 complex respiratory unit [PATH:ghi01100]
ghi_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ghi01100]
ghi_M00161  Photosystem II [PATH:ghi01100]
ghi_M00163  Photosystem I [PATH:ghi01100]
ghi_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:ghi01100]
ghi_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ghi01100]
ghi_M00169  CAM (Crassulacean acid metabolism), light [PATH:ghi01100]
ghi_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:ghi01100]
ghi_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:ghi01100]
ghi_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:ghi01100]
ghi_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ghi01100]
ghi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ghi01100]
ghi_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:ghi01100]
ghi_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:ghi01100]
ghi_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:ghi01100]
ghi_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:ghi01100]
ghi_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:ghi01100]
ghi_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ghi01100]
ghi_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:ghi01100]
ghi_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:ghi01100]
ghi_M00532  Photorespiration [PATH:ghi01100]
ghi_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ghi01100]
ghi_M00555  Betaine biosynthesis, choline => betaine [PATH:ghi01100]
ghi_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ghi01100]
ghi_M00621  Glycine cleavage system [PATH:ghi01100]
ghi_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ghi01100]
ghi_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ghi01100]
ghi_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ghi01100]
ghi_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ghi01100]
ghi_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:ghi01100]
ghi_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:ghi01100]
ghi_M00897  Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP [PATH:ghi01100]
ghi_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:ghi01100]
ghi_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:ghi01100]
ghi_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:ghi01100]
ghi_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:ghi01100]
ghi_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:ghi01100]
ghi_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:ghi01100]
ghi_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:ghi01100]
ghi_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:ghi01100]
ghi_M00936  Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:ghi01100]
ghi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ghi01100]
ghi_M00940  Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:ghi01100]
ghi_M00970  Proline degradation, proline => glutamate [PATH:ghi01100]
ghi_M00972  Proline metabolism [PATH:ghi01100]
Organism
Gossypium hirsutum (upland cotton) [GN:ghi]
Related
pathway
ghi00010  Glycolysis / Gluconeogenesis
ghi00020  Citrate cycle (TCA cycle)
ghi00030  Pentose phosphate pathway
ghi00040  Pentose and glucuronate interconversions
ghi00051  Fructose and mannose metabolism
ghi00052  Galactose metabolism
ghi00053  Ascorbate and aldarate metabolism
ghi00061  Fatty acid biosynthesis
ghi00062  Fatty acid elongation
ghi00071  Fatty acid degradation
ghi00073  Cutin, suberine and wax biosynthesis
ghi00100  Steroid biosynthesis
ghi00130  Ubiquinone and other terpenoid-quinone biosynthesis
ghi00190  Oxidative phosphorylation
ghi00195  Photosynthesis
ghi00196  Photosynthesis - antenna proteins
ghi00220  Arginine biosynthesis
ghi00230  Purine metabolism
ghi00232  Caffeine metabolism
ghi00240  Pyrimidine metabolism
ghi00250  Alanine, aspartate and glutamate metabolism
ghi00260  Glycine, serine and threonine metabolism
ghi00261  Monobactam biosynthesis
ghi00270  Cysteine and methionine metabolism
ghi00280  Valine, leucine and isoleucine degradation
ghi00290  Valine, leucine and isoleucine biosynthesis
ghi00300  Lysine biosynthesis
ghi00310  Lysine degradation
ghi00330  Arginine and proline metabolism
ghi00340  Histidine metabolism
ghi00350  Tyrosine metabolism
ghi00360  Phenylalanine metabolism
ghi00380  Tryptophan metabolism
ghi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ghi00410  beta-Alanine metabolism
ghi00430  Taurine and hypotaurine metabolism
ghi00440  Phosphonate and phosphinate metabolism
ghi00450  Selenocompound metabolism
ghi00460  Cyanoamino acid metabolism
ghi00470  D-Amino acid metabolism
ghi00480  Glutathione metabolism
ghi00500  Starch and sucrose metabolism
ghi00510  N-Glycan biosynthesis
ghi00511  Other glycan degradation
ghi00513  Various types of N-glycan biosynthesis
ghi00514  Other types of O-glycan biosynthesis
ghi00520  Amino sugar and nucleotide sugar metabolism
ghi00531  Glycosaminoglycan degradation
ghi00543  Exopolysaccharide biosynthesis
ghi00561  Glycerolipid metabolism
ghi00562  Inositol phosphate metabolism
ghi00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
ghi00564  Glycerophospholipid metabolism
ghi00565  Ether lipid metabolism
ghi00590  Arachidonic acid metabolism
ghi00591  Linoleic acid metabolism
ghi00592  alpha-Linolenic acid metabolism
ghi00600  Sphingolipid metabolism
ghi00601  Glycosphingolipid biosynthesis - lacto and neolacto series
ghi00603  Glycosphingolipid biosynthesis - globo and isoglobo series
ghi00604  Glycosphingolipid biosynthesis - ganglio series
ghi00620  Pyruvate metabolism
ghi00630  Glyoxylate and dicarboxylate metabolism
ghi00640  Propanoate metabolism
ghi00650  Butanoate metabolism
ghi00660  C5-Branched dibasic acid metabolism
ghi00670  One carbon pool by folate
ghi00710  Carbon fixation by Calvin cycle
ghi00730  Thiamine metabolism
ghi00740  Riboflavin metabolism
ghi00750  Vitamin B6 metabolism
ghi00760  Nicotinate and nicotinamide metabolism
ghi00770  Pantothenate and CoA biosynthesis
ghi00780  Biotin metabolism
ghi00785  Lipoic acid metabolism
ghi00790  Folate biosynthesis
ghi00860  Porphyrin metabolism
ghi00900  Terpenoid backbone biosynthesis
ghi00902  Monoterpenoid biosynthesis
ghi00904  Diterpenoid biosynthesis
ghi00905  Brassinosteroid biosynthesis
ghi00906  Carotenoid biosynthesis
ghi00908  Zeatin biosynthesis
ghi00909  Sesquiterpenoid and triterpenoid biosynthesis
ghi00910  Nitrogen metabolism
ghi00920  Sulfur metabolism
ghi00940  Phenylpropanoid biosynthesis
ghi00941  Flavonoid biosynthesis
ghi00942  Anthocyanin biosynthesis
ghi00943  Isoflavonoid biosynthesis
ghi00944  Flavone and flavonol biosynthesis
ghi00950  Isoquinoline alkaloid biosynthesis
ghi00960  Tropane, piperidine and pyridine alkaloid biosynthesis
ghi00965  Betalain biosynthesis
ghi00966  Glucosinolate biosynthesis
ghi00999  Biosynthesis of various plant secondary metabolites
ghi01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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