KEGG   PATHWAY: ghi00710
Entry
ghi00710                    Pathway                                
Name
Carbon fixation in photosynthetic organisms - Gossypium hirsutum (upland cotton)
Class
Metabolism; Energy metabolism
Pathway map
ghi00710  Carbon fixation in photosynthetic organisms
ghi00710

Module
ghi_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:ghi00710]
ghi_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ghi00710]
ghi_M00169  CAM (Crassulacean acid metabolism), light [PATH:ghi00710]
ghi_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:ghi00710]
ghi_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:ghi00710]
ghi_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:ghi00710]
Organism
Gossypium hirsutum (upland cotton) [GN:ghi]
Gene
3989157  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
121226665  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
121231910  ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
107912727  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
107912728  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
107927040  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
107916703  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
107963813  ribulose bisphosphate carboxylase small chain clone 512 [KO:K01602] [EC:4.1.1.39]
107954794  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
107952825  ribulose bisphosphate carboxylase small subunit, chloroplastic [KO:K01602] [EC:4.1.1.39]
107916926  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
107922096  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
107922181  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
107889582  phosphoglycerate kinase, cytosolic isoform X1 [KO:K00927] [EC:2.7.2.3]
107917863  phosphoglycerate kinase, chloroplastic [KO:K00927] [EC:2.7.2.3]
107917864  phosphoglycerate kinase, cytosolic-like [KO:K00927] [EC:2.7.2.3]
107891144  phosphoglycerate kinase isoform X1 [KO:K00927] [EC:2.7.2.3]
107924606  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
107924026  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
107888701  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
107899696  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
107892188  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
107911757  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
107912091  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
107886513  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
107886514  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like isoform X1 [KO:K00134] [EC:1.2.1.12]
107909816  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
107962236  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [KO:K00134] [EC:1.2.1.12]
107895144  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like isoform X1 [KO:K00134] [EC:1.2.1.12]
107926568  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
107926571  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
107957019  glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic [KO:K00134] [EC:1.2.1.12]
107897036  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
121229134  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
121209400  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
107922459  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [KO:K05298] [EC:1.2.1.13]
107917007  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [KO:K05298] [EC:1.2.1.13]
107934914  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
107897324  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic isoform X1 [KO:K05298] [EC:1.2.1.13]
107935841  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
107905717  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [KO:K05298] [EC:1.2.1.13]
107905755  glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [KO:K05298] [EC:1.2.1.13]
107914182  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic isoform X1 [KO:K05298] [EC:1.2.1.13]
107926947  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
107918770  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
107903807  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
107948544  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
107919978  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
107919979  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
107928128  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
107945811  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
107913527  fructose-bisphosphate aldolase 1, chloroplastic-like [KO:K01623] [EC:4.1.2.13]
107913529  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
107959985  fructose-bisphosphate aldolase 3, chloroplastic isoform X1 [KO:K01623] [EC:4.1.2.13]
107905363  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
107895164  fructose-bisphosphate aldolase, cytoplasmic isozyme 1-like [KO:K01623] [EC:4.1.2.13]
107899428  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
121216173  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
121228124  fructose-bisphosphate aldolase 6, cytosolic-like [KO:K01623] [EC:4.1.2.13]
107924622  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
107941694  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
107898531  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
107928931  fructose-1,6-bisphosphatase class 1-like [KO:K03841] [EC:3.1.3.11]
107910443  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
107932175  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
107899022  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
107947382  fructose-1,6-bisphosphatase class 1 [KO:K03841] [EC:3.1.3.11]
107948854  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
121223586  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
121213706  fructose-1,6-bisphosphatase, cytosolic isoform X1 [KO:K03841] [EC:3.1.3.11]
121214610  fructose-1,6-bisphosphatase, cytosolic-like [KO:K03841] [EC:3.1.3.11]
107954570  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
107941756  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
107899903  LOW QUALITY PROTEIN: transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
107952895  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
107945612  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
107911586  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
121210881  transketolase, chloroplastic-like [KO:K00615] [EC:2.2.1.1]
107935414  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
107951495  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
107894773  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
107886437  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
107888985  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
107929815  probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
107926830  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
107946276  probable ribose-5-phosphate isomerase 2 isoform X1 [KO:K01807] [EC:5.3.1.6]
107902045  probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
107916555  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
107920983  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
107898141  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
107910027  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
107934514  probable ribose-5-phosphate isomerase 2 isoform X1 [KO:K01807] [EC:5.3.1.6]
107946792  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
107938584  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
107946652  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
107941387  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
107898584  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
107950159  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
107916706  triosephosphate isomerase, chloroplastic isoform X1 [KO:K01803] [EC:5.3.1.1]
107953108  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
107959115  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
107922568  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
107906555  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
107934418  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
107886002  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
107949084  triosephosphate isomerase, chloroplastic-like [KO:K01803] [EC:5.3.1.1]
107932466  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
121207784  triosephosphate isomerase, cytosolic-like [KO:K01803] [EC:5.3.1.1]
107917647  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
107926357  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
107926380  ribulose-phosphate 3-epimerase, cytoplasmic isoform [KO:K01783] [EC:5.1.3.1]
107926703  ribulose-phosphate 3-epimerase, chloroplastic isoform X2 [KO:K01783] [EC:5.1.3.1]
107895534  ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [KO:K01783] [EC:5.1.3.1]
107951272  ribulose-5-phosphate-3-epimerase, chloroplastic isoform X1 [KO:K01783] [EC:5.1.3.1]
107953525  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
121211034  ribulose-5-phosphate-3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
107946467  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
107928294  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
107915834  phosphoenolpyruvate carboxylase, housekeeping isozyme [KO:K01595] [EC:4.1.1.31]
107917197  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
107909179  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
107888527  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
107934792  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
107895337  phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
107920383  phosphoenolpyruvate carboxylase-like [KO:K01595] [EC:4.1.1.31]
107953835  aspartate aminotransferase, cytoplasmic isoform X1 [KO:K14454] [EC:2.6.1.1]
107900511  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
107953834  aspartate aminotransferase, cytoplasmic [KO:K14454] [EC:2.6.1.1]
107901245  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
121218468  aspartate aminotransferase, cytoplasmic-like [KO:K14454] [EC:2.6.1.1]
107900512  aspartate aminotransferase, cytoplasmic-like isoform X1 [KO:K14454] [EC:2.6.1.1]
107950503  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
107933840  phosphoenolpyruvate carboxykinase (ATP) 1 isoform X1 [KO:K01610] [EC:4.1.1.49]
107935259  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
107913366  phosphoenolpyruvate carboxykinase (ATP) 1-like [KO:K01610] [EC:4.1.1.49]
107945321  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
107906033  alanine aminotransferase 2, mitochondrial [KO:K00814] [EC:2.6.1.2]
107913835  alanine aminotransferase 2, mitochondrial [KO:K00814] [EC:2.6.1.2]
107960745  alanine aminotransferase 1, mitochondrial isoform X1 [KO:K00814] [EC:2.6.1.2]
107897463  alanine aminotransferase 2, mitochondrial-like [KO:K00814] [EC:2.6.1.2]
107909695  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
121219607  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
107897656  pyruvate, phosphate dikinase 2 [KO:K01006] [EC:2.7.9.1]
107915082  pyruvate, phosphate dikinase 2 isoform X1 [KO:K01006] [EC:2.7.9.1]
107897092  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
107913882  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
107953852  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
107951402  NADP-dependent malic enzyme isoform X2 [KO:K00029] [EC:1.1.1.40]
107951802  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
107897353  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
107950654  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
107932189  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
107940158  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
107906971  NADP-dependent malic enzyme-like [KO:K00029] [EC:1.1.1.40]
107901517  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
107904294  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
107943658  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
107915381  aspartate aminotransferase, mitochondrial-like [KO:K14455] [EC:2.6.1.1]
107896758  LOW QUALITY PROTEIN: aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
107888512  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
107931350  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
107936241  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
107890568  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
107938660  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
107940531  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
107897068  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
107947482  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
121220994  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
107950511  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
107926717  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
107917747  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
107912129  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
107948725  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
107935268  malate dehydrogenase, glyoxysomal isoform X1 [KO:K00026] [EC:1.1.1.37]
107922020  malate dehydrogenase 2, peroxisomal [KO:K00026] [EC:1.1.1.37]
107925450  malate dehydrogenase 2, peroxisomal [KO:K00026] [EC:1.1.1.37]
107903665  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
107953505  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
107886143  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
107917950  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
107949820  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
121202959  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
107911964  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
107948661  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
107952931  NAD-dependent malic enzyme 2, mitochondrial-like [KO:K00028] [EC:1.1.1.39]
107954551  NAD-dependent malic enzyme 2, mitochondrial [KO:K00028] [EC:1.1.1.39]
107957250  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial-like isoform X1 [KO:K00028] [EC:1.1.1.39]
107960344  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
ghi00010  Glycolysis / Gluconeogenesis
ghi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ghi00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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