KEGG   PATHWAY: gjf01100
Entry
gjf01100                    Pathway                                
Name
Metabolic pathways - Geobacillus genomosp. 3
Class
Pathway map
gjf01100  Metabolic pathways
gjf01100

Module
gjf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:gjf01100]
gjf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:gjf01100]
gjf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:gjf01100]
gjf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:gjf01100]
gjf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:gjf01100]
gjf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:gjf01100]
gjf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:gjf01100]
gjf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:gjf01100]
gjf_M00012  Glyoxylate cycle [PATH:gjf01100]
gjf_M00015  Proline biosynthesis, glutamate => proline [PATH:gjf01100]
gjf_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:gjf01100]
gjf_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:gjf01100]
gjf_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:gjf01100]
gjf_M00021  Cysteine biosynthesis, serine => cysteine [PATH:gjf01100]
gjf_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:gjf01100]
gjf_M00026  Histidine biosynthesis, PRPP => histidine [PATH:gjf01100]
gjf_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:gjf01100]
gjf_M00034  Methionine salvage pathway [PATH:gjf01100]
gjf_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:gjf01100]
gjf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:gjf01100]
gjf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:gjf01100]
gjf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:gjf01100]
gjf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:gjf01100]
gjf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:gjf01100]
gjf_M00082  Fatty acid biosynthesis, initiation [PATH:gjf01100]
gjf_M00083  Fatty acid biosynthesis, elongation [PATH:gjf01100]
gjf_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:gjf01100]
gjf_M00087  beta-Oxidation [PATH:gjf01100]
gjf_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:gjf01100]
gjf_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:gjf01100]
gjf_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:gjf01100]
gjf_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:gjf01100]
gjf_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:gjf01100]
gjf_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:gjf01100]
gjf_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:gjf01100]
gjf_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:gjf01100]
gjf_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:gjf01100]
gjf_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:gjf01100]
gjf_M00151  Cytochrome bc1 complex respiratory unit [PATH:gjf01100]
gjf_M00155  Cytochrome c oxidase, prokaryotes [PATH:gjf01100]
gjf_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:gjf01100]
gjf_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:gjf01100]
gjf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:gjf01100]
gjf_M00345  Formaldehyde assimilation, ribulose monophosphate pathway [PATH:gjf01100]
gjf_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:gjf01100]
gjf_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:gjf01100]
gjf_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:gjf01100]
gjf_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:gjf01100]
gjf_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:gjf01100]
gjf_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:gjf01100]
gjf_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:gjf01100]
gjf_M00569  Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:gjf01100]
gjf_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:gjf01100]
gjf_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:gjf01100]
gjf_M00609  Cysteine biosynthesis, methionine => cysteine [PATH:gjf01100]
gjf_M00621  Glycine cleavage system [PATH:gjf01100]
gjf_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:gjf01100]
gjf_M00844  Arginine biosynthesis, ornithine => arginine [PATH:gjf01100]
gjf_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:gjf01100]
gjf_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:gjf01100]
gjf_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:gjf01100]
gjf_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:gjf01100]
gjf_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:gjf01100]
gjf_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:gjf01100]
gjf_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:gjf01100]
gjf_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:gjf01100]
gjf_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:gjf01100]
gjf_M00970  Proline degradation, proline => glutamate [PATH:gjf01100]
gjf_M00972  Proline metabolism [PATH:gjf01100]
Organism
Geobacillus genomosp. 3 [GN:gjf]
Related
pathway
gjf00010  Glycolysis / Gluconeogenesis
gjf00020  Citrate cycle (TCA cycle)
gjf00030  Pentose phosphate pathway
gjf00040  Pentose and glucuronate interconversions
gjf00051  Fructose and mannose metabolism
gjf00052  Galactose metabolism
gjf00053  Ascorbate and aldarate metabolism
gjf00061  Fatty acid biosynthesis
gjf00071  Fatty acid degradation
gjf00130  Ubiquinone and other terpenoid-quinone biosynthesis
gjf00190  Oxidative phosphorylation
gjf00220  Arginine biosynthesis
gjf00230  Purine metabolism
gjf00240  Pyrimidine metabolism
gjf00250  Alanine, aspartate and glutamate metabolism
gjf00260  Glycine, serine and threonine metabolism
gjf00261  Monobactam biosynthesis
gjf00270  Cysteine and methionine metabolism
gjf00280  Valine, leucine and isoleucine degradation
gjf00290  Valine, leucine and isoleucine biosynthesis
gjf00300  Lysine biosynthesis
gjf00310  Lysine degradation
gjf00330  Arginine and proline metabolism
gjf00332  Carbapenem biosynthesis
gjf00340  Histidine metabolism
gjf00350  Tyrosine metabolism
gjf00360  Phenylalanine metabolism
gjf00361  Chlorocyclohexane and chlorobenzene degradation
gjf00362  Benzoate degradation
gjf00380  Tryptophan metabolism
gjf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
gjf00401  Novobiocin biosynthesis
gjf00410  beta-Alanine metabolism
gjf00430  Taurine and hypotaurine metabolism
gjf00450  Selenocompound metabolism
gjf00460  Cyanoamino acid metabolism
gjf00470  D-Amino acid metabolism
gjf00480  Glutathione metabolism
gjf00500  Starch and sucrose metabolism
gjf00520  Amino sugar and nucleotide sugar metabolism
gjf00521  Streptomycin biosynthesis
gjf00541  O-Antigen nucleotide sugar biosynthesis
gjf00542  O-Antigen repeat unit biosynthesis
gjf00543  Exopolysaccharide biosynthesis
gjf00550  Peptidoglycan biosynthesis
gjf00552  Teichoic acid biosynthesis
gjf00561  Glycerolipid metabolism
gjf00562  Inositol phosphate metabolism
gjf00564  Glycerophospholipid metabolism
gjf00592  alpha-Linolenic acid metabolism
gjf00620  Pyruvate metabolism
gjf00621  Dioxin degradation
gjf00622  Xylene degradation
gjf00625  Chloroalkane and chloroalkene degradation
gjf00626  Naphthalene degradation
gjf00627  Aminobenzoate degradation
gjf00630  Glyoxylate and dicarboxylate metabolism
gjf00640  Propanoate metabolism
gjf00643  Styrene degradation
gjf00650  Butanoate metabolism
gjf00660  C5-Branched dibasic acid metabolism
gjf00670  One carbon pool by folate
gjf00680  Methane metabolism
gjf00710  Carbon fixation by Calvin cycle
gjf00720  Other carbon fixation pathways
gjf00730  Thiamine metabolism
gjf00740  Riboflavin metabolism
gjf00750  Vitamin B6 metabolism
gjf00760  Nicotinate and nicotinamide metabolism
gjf00770  Pantothenate and CoA biosynthesis
gjf00780  Biotin metabolism
gjf00785  Lipoic acid metabolism
gjf00790  Folate biosynthesis
gjf00860  Porphyrin metabolism
gjf00900  Terpenoid backbone biosynthesis
gjf00907  Pinene, camphor and geraniol degradation
gjf00910  Nitrogen metabolism
gjf00920  Sulfur metabolism
gjf00930  Caprolactam degradation
gjf00946  Degradation of flavonoids
gjf00997  Biosynthesis of various other secondary metabolites
gjf00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system