KEGG   PATHWAY: jal02010
Entry
jal02010                    Pathway                                
Name
ABC transporters - Janthinobacterium sp. LM6
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
jal02010  ABC transporters
jal02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Janthinobacterium sp. LM6 [GN:jal]
Gene
BZG29_12580  thiosulfate transporter subunit [KO:K02048]
BZG29_23350  sulfate transporter subunit [KO:K23163]
BZG29_23335  sulfate ABC transporter permease subunit CysT [KO:K02046]
BZG29_23330  sulfate ABC transporter permease subunit CysW [KO:K02047]
BZG29_23325  sulfate ABC transporter ATP-binding protein [KO:K02045] [EC:7.3.2.3]
BZG29_10125  taurine ABC transporter substrate-binding protein [KO:K15551]
BZG29_10135  taurine ABC transporter permease [KO:K15552]
BZG29_10130  nitrate ABC transporter ATP-binding protein [KO:K10831] [EC:7.6.2.7]
BZG29_16460  hypothetical protein [KO:K15553]
BZG29_16490  nitrate ABC transporter substrate-binding protein [KO:K15553]
BZG29_11605  sulfonate ABC transporter substrate-binding protein [KO:K15553]
BZG29_26470  nitrate ABC transporter substrate-binding protein [KO:K15553]
BZG29_16480  ABC transporter permease [KO:K15554]
BZG29_16485  ABC transporter permease [KO:K15554]
BZG29_11615  ABC transporter permease [KO:K15554]
BZG29_26460  ABC transporter permease [KO:K15554]
BZG29_16470  sulfonate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
BZG29_11620  ssuB; aliphatic sulfonate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
BZG29_26465  sulfonate ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
BZG29_01215  molybdate ABC transporter substrate-binding protein [KO:K02020]
BZG29_01210  molybdenum ABC transporter permease subunit [KO:K02018]
BZG29_01205  ABC transporter ATP-binding protein [KO:K02017] [EC:7.3.2.5]
BZG29_24770  iron ABC transporter substrate-binding protein [KO:K02012]
BZG29_21705  iron ABC transporter substrate-binding protein [KO:K02012]
BZG29_24765  iron ABC transporter permease [KO:K02011]
BZG29_21700  spermidine/putrescine ABC transporter permease [KO:K02011]
BZG29_24760  ABC transporter ATP-binding protein [KO:K02010] [EC:7.2.2.7]
BZG29_21695  lipase [KO:K02010] [EC:7.2.2.7]
BZG29_10720  spermidine/putrescine ABC transporter substrate-binding protein PotF [KO:K11073]
BZG29_26395  putrescine ABC transporter permease PotI [KO:K11074]
BZG29_26400  putrescine ABC transporter permease PotH [KO:K11075]
BZG29_26405  polyamine ABC transporter ATP-binding protein [KO:K11076] [EC:7.6.2.16]
BZG29_06415  glycine betaine ABC transporter substrate-binding protein [KO:K02002]
BZG29_06410  proline/betaine ABC transporter permease ProW [KO:K02001]
BZG29_06405  glycine betaine/L-proline ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
BZG29_25845  amino acid ABC transporter permease [KO:K05845 K05846]
BZG29_11410  maltose ABC transporter substrate-binding protein MalE [KO:K10108]
BZG29_11405  maltose ABC transporter permease MalF [KO:K10109]
BZG29_11400  malG; maltose transporter permease [KO:K10110]
BZG29_07940  sugar ABC transporter ATP-binding protein [KO:K10111] [EC:7.5.2.-]
BZG29_10185  ABC transporter ATP-binding protein [KO:K10111] [EC:7.5.2.-]
BZG29_11415  ABC transporter [KO:K10111] [EC:7.5.2.-]
BZG29_07255  ABC transporter [KO:K10111] [EC:7.5.2.-]
BZG29_12400  sugar ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
BZG29_18200  sugar ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
BZG29_10170  sugar ABC transporter substrate-binding protein [KO:K10227]
BZG29_10175  sugar ABC transporter permease [KO:K10228]
BZG29_10180  sugar ABC transporter permease [KO:K10229]
BZG29_18205  sugar ABC transporter substrate-binding protein [KO:K10236]
BZG29_18210  sugar ABC transporter permease [KO:K10237]
BZG29_18215  sugar ABC transporter permease [KO:K10238]
BZG29_07920  sugar ABC transporter substrate-binding protein [KO:K10240]
BZG29_07925  cytochrome C biogenesis protein [KO:K10241]
BZG29_07930  sugar ABC transporter permease [KO:K10242]
BZG29_07275  sugar ABC transporter substrate-binding protein [KO:K17244]
BZG29_07270  lactose ABC transporter permease [KO:K17245]
BZG29_07265  sugar ABC transporter permease [KO:K17246]
BZG29_01650  sugar ABC transporter substrate-binding protein [KO:K10546]
BZG29_01640  ABC transporter permease [KO:K10547]
BZG29_01645  ABC transporter ATP-binding protein [KO:K10548] [EC:7.5.2.-]
BZG29_00605  hypothetical protein [KO:K07323]
BZG29_00615  outer membrane lipid asymmetry maintenance protein MlaD [KO:K02067]
BZG29_27525  MCE family protein [KO:K02067]
BZG29_20115  mammalian cell entry protein [KO:K02067]
BZG29_00620  ABC transporter permease [KO:K02066]
BZG29_27515  ABC transporter permease [KO:K02066]
BZG29_20110  ABC transporter permease [KO:K02066]
BZG29_00600  hypothetical protein [KO:K07122]
BZG29_00625  ABC transporter ATP-binding protein [KO:K02065]
BZG29_27520  ABC transporter ATP-binding protein [KO:K02065]
BZG29_06930  BMP family ABC transporter substrate-binding protein [KO:K07335]
BZG29_06040  BMP family ABC transporter substrate-binding protein [KO:K07335]
BZG29_06920  sugar ABC transporter permease [KO:K23535]
BZG29_06030  ABC transporter permease [KO:K23535]
BZG29_06025  ABC transporter permease [KO:K23536]
BZG29_06925  ABC transporter permease [KO:K23536]
BZG29_06915  ABC transporter [KO:K23537]
BZG29_06035  heme ABC transporter ATP-binding protein [KO:K23537]
BZG29_12385  sugar ABC transporter substrate-binding protein [KO:K17315]
BZG29_12390  ABC transporter permease [KO:K17316]
BZG29_12395  sugar ABC transporter permease [KO:K17317]
BZG29_00380  LacI family transcriptional regulator [KO:K10439]
BZG29_02370  ABC transporter substrate-binding protein [KO:K10439]
BZG29_15875  transcriptional regulator [KO:K10439]
BZG29_00370  ABC transporter permease [KO:K10440]
BZG29_02365  ABC transporter permease [KO:K10440]
BZG29_15885  ribose ABC transporter permease [KO:K10440]
BZG29_00375  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
BZG29_02360  ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
BZG29_15880  D-xylose ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
BZG29_00355  D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
BZG29_02275  LacI family transcriptional regulator [KO:K23508]
BZG29_02290  sugar ABC transporter permease YjfF [KO:K23509]
BZG29_02285  sugar ABC transporter permease [KO:K23509]
BZG29_02280  sugar ABC transporter ATP-binding protein [KO:K10820] [EC:7.5.2.9]
BZG29_01670  D-xylose ABC transporter substrate-binding protein [KO:K10543]
BZG29_01680  sugar ABC transporter permease [KO:K10544]
BZG29_01675  xylose ABC transporter ATP-binding protein [KO:K10545] [EC:7.5.2.10]
BZG29_19365  ABC transporter substrate-binding protein [KO:K17321]
BZG29_19380  ABC transporter permease [KO:K17322]
BZG29_19375  sugar ABC transporter permease [KO:K17323]
BZG29_19390  ABC transporter [KO:K17324]
BZG29_19385  ABC transporter ATP-binding protein [KO:K17325]
BZG29_10735  phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
BZG29_10740  phosphate ABC transporter permease subunit PstC [KO:K02037]
BZG29_10745  phosphate ABC transporter, permease protein PstA [KO:K02038]
BZG29_10750  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
BZG29_15630  putative selenate ABC transporter substrate-binding protein [KO:K02044]
BZG29_15640  ABC transporter permease [KO:K02042]
BZG29_15645  phosphonate ABC transporter, permease protein PhnE [KO:K02042]
BZG29_15635  phosphonate ABC transporter [KO:K02041] [EC:7.3.2.2]
BZG29_27345  amino acid ABC transporter substrate-binding protein [KO:K10001]
BZG29_27335  amino acid ABC transporter permease [KO:K10002]
BZG29_27340  glutamate ABC transporter permease [KO:K10003]
BZG29_27330  artP; arginine transporter ATP-binding subunit [KO:K10004] [EC:7.4.2.1]
BZG29_01500  ABC transporter permease [KO:K01999]
BZG29_01835  ABC transporter permease [KO:K01999]
BZG29_12330  ABC transporter permease [KO:K01999]
BZG29_25670  ABC transporter substrate-binding protein [KO:K01999]
BZG29_23595  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
BZG29_17655  amino acid ABC transporter substrate-binding protein [KO:K01999]
BZG29_11835  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
BZG29_01505  branched-chain amino acid ABC transporter permease [KO:K01997]
BZG29_01845  branched-chain amino acid ABC transporter permease [KO:K01997]
BZG29_23400  branched-chain amino acid ABC transporter permease [KO:K01997]
BZG29_25665  branched-chain amino acid ABC transporter permease [KO:K01997]
BZG29_17650  branched-chain amino acid ABC transporter permease [KO:K01997]
BZG29_11830  branched-chain amino acid ABC transporter permease [KO:K01997]
BZG29_17645  ABC transporter [KO:K01995 K01998]
BZG29_01510  branched-chain amino acid ABC transporter permease [KO:K01998]
BZG29_01840  branched-chain amino acid ABC transporter permease [KO:K01998]
BZG29_23395  ABC transporter ATP-binding protein [KO:K01998]
BZG29_25660  branched-chain amino acid ABC transporter permease [KO:K01998]
BZG29_11825  branched-chain amino acid ABC transporter permease [KO:K01998]
BZG29_01490  ABC transporter ATP-binding protein [KO:K01995]
BZG29_01850  ABC transporter ATP-binding protein [KO:K01995]
BZG29_23390  ABC transporter ATP-binding protein [KO:K01995]
BZG29_25655  livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG [KO:K01995]
BZG29_11820  ABC transporter ATP-binding protein [KO:K01995]
BZG29_01495  ABC transporter ATP-binding protein [KO:K01996]
BZG29_01830  ABC transporter ATP-binding protein [KO:K01996]
BZG29_23385  ABC transporter ATP-binding protein [KO:K01996]
BZG29_25650  ABC transporter ATP-binding protein [KO:K01996]
BZG29_17640  ABC transporter ATP-binding protein [KO:K01996]
BZG29_11815  livF; branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996]
BZG29_19660  hypothetical protein [KO:K02073]
BZG29_11590  hypothetical protein [KO:K02073]
BZG29_19655  methionine ABC transporter ATP-binding protein [KO:K02072]
BZG29_19650  ABC transporter ATP-binding protein [KO:K02071]
BZG29_19550  urea ABC transporter substrate-binding protein [KO:K11959]
BZG29_19545  urea ABC transporter permease subunit UrtB [KO:K11960]
BZG29_19540  urea ABC transporter permease subunit UrtC [KO:K11961]
BZG29_19535  urea ABC transporter ATP-binding protein UrtD [KO:K11962]
BZG29_19530  urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
BZG29_04900  ABC transporter [KO:K09696]
BZG29_04905  ABC transporter [KO:K09697] [EC:7.2.2.4]
BZG29_17570  ABC transporter permease [KO:K09808]
BZG29_17575  ABC transporter permease [KO:K09808]
BZG29_17565  lipoprotein releasing system, ATP-binding protein [KO:K09810] [EC:7.6.2.-]
BZG29_08415  LPS export ABC transporter permease LptF [KO:K07091]
BZG29_08420  LPS export ABC transporter permease LptG [KO:K11720]
BZG29_03630  LPS export ABC transporter ATP-binding protein [KO:K06861] [EC:7.5.2.5]
BZG29_05510  permease [KO:K09811]
BZG29_05515  cell division ATP-binding protein FtsE [KO:K09812]
BZG29_03545  ABC transporter ATP-binding protein [KO:K14698] [EC:7.-.-.-]
BZG29_03550  ABC transporter ATP-binding protein [KO:K14699] [EC:7.-.-.-]
BZG29_09230  lipid A export permease/ATP-binding protein MsbA [KO:K11085] [EC:7.5.2.6]
BZG29_24130  lipid A export permease/ATP-binding protein MsbA [KO:K11085] [EC:7.5.2.6]
BZG29_23820  ABC transporter ATP-binding protein [KO:K18889]
BZG29_23825  ABC transporter ATP-binding protein [KO:K18890]
BZG29_14665  type I secretion system permease/ATPase [KO:K11004]
BZG29_27250  ABC transporter ATP-binding protein [KO:K13409]
BZG29_27350  metal ABC transporter permease [KO:K24821]
BZG29_10910  protease/lipase ABC transporter ATP-binding protein [KO:K12541]
BZG29_12125  ABC transporter ATP-binding protein [KO:K16012]
BZG29_12120  thiol reductant ABC exporter subunit CydD [KO:K16013]
BZG29_25205  macrolide ABC transporter permease/ATP-binding protein MacB [KO:K05685] [EC:7.6.2.-]
BZG29_19820  hypothetical protein [KO:K06160]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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