KEGG   PATHWAY: ksc03440
Entry
ksc03440                    Pathway                                
Name
Homologous recombination - Komagataeibacter saccharivorans
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
ksc03440  Homologous recombination
ksc03440

Other DBs
GO: 0000724
Organism
Komagataeibacter saccharivorans [GN:ksc]
Gene
CD178_01552  recJ; Single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
CD178_03310  ssb; Single-stranded DNA-binding protein [KO:K03111]
CD178_00635  ssb; Single-stranded DNA-binding protein [KO:K03111]
CD178_03421  ssb; Single-stranded DNA-binding protein [KO:K03111]
CD178_00192  recF; DNA replication and repair protein RecF [KO:K03629]
CD178_02342  DNA repair protein RecO [KO:K03584]
CD178_01782  recR; Recombination protein RecR [KO:K06187]
CD178_00609  recombinase A [KO:K03553]
CD178_01226  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
CD178_01443  ruvA; Holliday junction ATP-dependent DNA helicase RuvA [KO:K03550]
CD178_01444  ruvB; Holliday junction ATP-dependent DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
CD178_01442  ruvC; Crossover junction endodeoxyribonuclease RuvC [KO:K01159] [EC:3.1.21.10]
CD178_02406  recG; ATP-dependent DNA helicase RecG [KO:K03655] [EC:5.6.2.4]
CD178_02036  dnaE1; DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CD178_00193  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
CD178_00700  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
CD178_02237  dnaX_2; DNA polymerase III subunit tau [KO:K02341] [EC:2.7.7.7]
CD178_01474  polC; DNA polymerase III PolC-type [KO:K02342] [EC:2.7.7.7]
CD178_00174  dnaQ; DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
CD178_01909  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
CD178_00665  priA; Primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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