PATHWAY: meso01100 Help Entry meso01100                   Pathway                                 Name Metabolic pathways - Aquibium oceanicum Class BRITE hierarchy Pathway map meso01100   Metabolic pathways Module meso_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:meso01100] meso_M00002   Glycolysis, core module involving three-carbon compounds [PATH:meso01100] meso_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:meso01100] meso_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:meso01100] meso_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:meso01100] meso_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:meso01100] meso_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:meso01100] meso_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:meso01100] meso_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:meso01100] meso_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:meso01100] meso_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:meso01100] meso_M00012   Glyoxylate cycle [PATH:meso01100] meso_M00015   Proline biosynthesis, glutamate => proline [PATH:meso01100] meso_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:meso01100] meso_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:meso01100] meso_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:meso01100] meso_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:meso01100] meso_M00021   Cysteine biosynthesis, serine => cysteine [PATH:meso01100] meso_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:meso01100] meso_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:meso01100] meso_M00026   Histidine biosynthesis, PRPP => histidine [PATH:meso01100] meso_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:meso01100] meso_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:meso01100] meso_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:meso01100] meso_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:meso01100] meso_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:meso01100] meso_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:meso01100] meso_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:meso01100] meso_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:meso01100] meso_M00082   Fatty acid biosynthesis, initiation [PATH:meso01100] meso_M00083   Fatty acid biosynthesis, elongation [PATH:meso01100] meso_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:meso01100] meso_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:meso01100] meso_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:meso01100] meso_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:meso01100] meso_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:meso01100] meso_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:meso01100] meso_M00140   C1-unit interconversion, prokaryotes [PATH:meso01100] meso_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:meso01100] meso_M00149   Succinate dehydrogenase, prokaryotes [PATH:meso01100] meso_M00151   Cytochrome bc1 complex respiratory unit [PATH:meso01100] meso_M00155   Cytochrome c oxidase, prokaryotes [PATH:meso01100] meso_M00156   Cytochrome c oxidase, cbb3-type [PATH:meso01100] meso_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:meso01100] meso_M00169   CAM (Crassulacean acid metabolism), light [PATH:meso01100] meso_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:meso01100] meso_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:meso01100] meso_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:meso01100] meso_M00555   Betaine biosynthesis, choline => betaine [PATH:meso01100] meso_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:meso01100] meso_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:meso01100] meso_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:meso01100] meso_M00621   Glycine cleavage system [PATH:meso01100] meso_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:meso01100] meso_M00793   dTDP-L-rhamnose biosynthesis [PATH:meso01100] meso_M00844   Arginine biosynthesis, ornithine => arginine [PATH:meso01100] meso_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:meso01100] meso_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:meso01100] meso_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:meso01100] meso_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:meso01100] meso_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:meso01100] meso_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:meso01100] meso_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:meso01100] meso_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:meso01100] meso_M00970   Proline degradation, proline => glutamate [PATH:meso01100] Organism Aquibium oceanicum [GN:meso] Related pathway meso00010   Glycolysis / Gluconeogenesis meso00020   Citrate cycle (TCA cycle) meso00030   Pentose phosphate pathway meso00040   Pentose and glucuronate interconversions meso00051   Fructose and mannose metabolism meso00052   Galactose metabolism meso00053   Ascorbate and aldarate metabolism meso00061   Fatty acid biosynthesis meso00071   Fatty acid degradation meso00130   Ubiquinone and other terpenoid-quinone biosynthesis meso00190   Oxidative phosphorylation meso00220   Arginine biosynthesis meso00230   Purine metabolism meso00240   Pyrimidine metabolism meso00250   Alanine, aspartate and glutamate metabolism meso00260   Glycine, serine and threonine metabolism meso00261   Monobactam biosynthesis meso00270   Cysteine and methionine metabolism meso00280   Valine, leucine and isoleucine degradation meso00290   Valine, leucine and isoleucine biosynthesis meso00300   Lysine biosynthesis meso00310   Lysine degradation meso00330   Arginine and proline metabolism meso00332   Carbapenem biosynthesis meso00340   Histidine metabolism meso00350   Tyrosine metabolism meso00360   Phenylalanine metabolism meso00361   Chlorocyclohexane and chlorobenzene degradation meso00362   Benzoate degradation meso00364   Fluorobenzoate degradation meso00365   Furfural degradation meso00380   Tryptophan metabolism meso00400   Phenylalanine, tyrosine and tryptophan biosynthesis meso00401   Novobiocin biosynthesis meso00405   Phenazine biosynthesis meso00410   beta-Alanine metabolism meso00430   Taurine and hypotaurine metabolism meso00440   Phosphonate and phosphinate metabolism meso00450   Selenocompound metabolism meso00460   Cyanoamino acid metabolism meso00470   D-Amino acid metabolism meso00480   Glutathione metabolism meso00500   Starch and sucrose metabolism meso00520   Amino sugar and nucleotide sugar metabolism meso00521   Streptomycin biosynthesis meso00523   Polyketide sugar unit biosynthesis meso00525   Acarbose and validamycin biosynthesis meso00540   Lipopolysaccharide biosynthesis meso00541   O-Antigen nucleotide sugar biosynthesis meso00543   Exopolysaccharide biosynthesis meso00550   Peptidoglycan biosynthesis meso00552   Teichoic acid biosynthesis meso00561   Glycerolipid metabolism meso00562   Inositol phosphate metabolism meso00564   Glycerophospholipid metabolism meso00620   Pyruvate metabolism meso00621   Dioxin degradation meso00622   Xylene degradation meso00623   Toluene degradation meso00624   Polycyclic aromatic hydrocarbon degradation meso00625   Chloroalkane and chloroalkene degradation meso00626   Naphthalene degradation meso00627   Aminobenzoate degradation meso00630   Glyoxylate and dicarboxylate metabolism meso00633   Nitrotoluene degradation meso00640   Propanoate metabolism meso00643   Styrene degradation meso00650   Butanoate metabolism meso00660   C5-Branched dibasic acid metabolism meso00670   One carbon pool by folate meso00680   Methane metabolism meso00710   Carbon fixation by Calvin cycle meso00720   Other carbon fixation pathways meso00730   Thiamine metabolism meso00740   Riboflavin metabolism meso00750   Vitamin B6 metabolism meso00760   Nicotinate and nicotinamide metabolism meso00770   Pantothenate and CoA biosynthesis meso00780   Biotin metabolism meso00785   Lipoic acid metabolism meso00790   Folate biosynthesis meso00791   Atrazine degradation meso00860   Porphyrin metabolism meso00900   Terpenoid backbone biosynthesis meso00906   Carotenoid biosynthesis meso00907   Pinene, camphor and geraniol degradation meso00910   Nitrogen metabolism meso00920   Sulfur metabolism meso00930   Caprolactam degradation meso00999   Biosynthesis of various plant secondary metabolites meso01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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