KEGG   PATHWAY: mmag02010
Entry
mmag02010                   Pathway                                
Name
ABC transporters - Mycolicibacterium madagascariense
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
mmag02010  ABC transporters
mmag02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Mycolicibacterium madagascariense [GN:mmag]
Gene
MMAD_36570  sulfate ABC transporter substrate-binding protein [KO:K23163]
MMAD_36560  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
MMAD_36550  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
MMAD_36540  cysA; sulfate/thiosulfate import ATP-binding protein CysA [KO:K02045] [EC:7.3.2.3]
MMAD_24420  ssuA; ABC transporter substrate-binding protein [KO:K15553]
MMAD_10090  putative nitrate ABC transporter, periplasmic protein [KO:K15553]
MMAD_24400  sulfonate ABC transporter permease [KO:K15554]
MMAD_10100  putative nitrate ABC transporter, permease protein [KO:K15554]
MMAD_24410  hypothetical protein [KO:K15555] [EC:7.6.2.14]
MMAD_10110  putative nitrate ABC transporter, ATP-binding protein [KO:K15555] [EC:7.6.2.14]
MMAD_30310  modA_1; molybdate-binding protein [KO:K02020]
MMAD_45020  modA_2; molybdate-binding protein [KO:K02020]
MMAD_30300  modB; molybdenum transport system permease protein ModB [KO:K02018]
MMAD_30290  modC; molybdenum import ATP-binding protein ModC [KO:K02017] [EC:7.3.2.5]
MMAD_27680  twin-arginine translocation pathway signal protein [KO:K11069]
MMAD_35910  putrescine-binding periplasmic protein [KO:K11069]
MMAD_27660  ABC transporter permease [KO:K11070]
MMAD_35930  hypothetical protein [KO:K11070]
MMAD_27670  ABC transporter permease [KO:K11071]
MMAD_35920  ABC transporter permease [KO:K11071]
MMAD_27690  potA; spermidine/putrescine import ATP-binding protein PotA [KO:K11072] [EC:7.6.2.11]
MMAD_35900  polyamine-transporting ATPase [KO:K11072] [EC:7.6.2.11]
MMAD_05020  putative ABC transporter, periplasmic protein [KO:K11081]
MMAD_05050  putative ABC transporter, permease protein [KO:K11082]
MMAD_05040  2-aminoethylphosphonate ABC transporter permease [KO:K11083]
MMAD_05030  putative ABC transporter, ATP-binding protein [KO:K11084]
MMAD_24530  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
MMAD_51360  putative amino acid ABC transporter, substrate binding protein [KO:K05845]
MMAD_24540  ABC transporter permease [KO:K05846]
MMAD_24560  ABC transporter permease [KO:K05846]
MMAD_51330  ABC transporter permease [KO:K05846]
MMAD_51340  ABC transporter permease [KO:K05846]
MMAD_24550  ABC transporter [KO:K05847] [EC:7.6.2.9]
MMAD_51350  proline/glycine betaine ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
MMAD_25210  sugar ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
MMAD_41400  ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
MMAD_45420  ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
MMAD_20640  sugar ABC transporter ATP-binding protein [KO:K10112] [EC:7.5.2.-]
MMAD_45450  sugar ABC transporter substrate-binding protein [KO:K10227]
MMAD_45440  sugar ABC transporter permease [KO:K10228]
MMAD_45430  sugar ABC transporter permease [KO:K10229]
MMAD_41430  ABC transporter substrate-binding protein [KO:K10236]
MMAD_41420  ABC transporter permease [KO:K10237]
MMAD_41410  ABC transporter permease [KO:K10238]
MMAD_38950  hypothetical protein [KO:K02067]
MMAD_38960  virulence factor Mce [KO:K02067]
MMAD_38970  mammalian cell entry protein [KO:K02067]
MMAD_38980  mammalian cell entry protein [KO:K02067]
MMAD_38990  mammalian cell entry protein [KO:K02067]
MMAD_39000  virulence factor [KO:K02067]
MMAD_47590  mammalian cell entry protein [KO:K02067]
MMAD_47600  mammalian cell entry protein [KO:K02067]
MMAD_47610  mammalian cell entry protein [KO:K02067]
MMAD_47620  mammalian cell entry protein [KO:K02067]
MMAD_47630  mammalian cell entry protein [KO:K02067]
MMAD_47640  MCE-family protein Mce4A [KO:K02067]
MMAD_53140  mammalian cell entry protein [KO:K02067]
MMAD_53150  mammalian cell entry protein [KO:K02067]
MMAD_53160  mammalian cell entry protein [KO:K02067]
MMAD_53170  mammalian cell entry protein [KO:K02067]
MMAD_53180  mammalian cell entry protein [KO:K02067]
MMAD_53190  virulence factor Mce family protein [KO:K02067]
MMAD_55460  virulence factor [KO:K02067]
MMAD_55470  mce3B; Mce family protein Mce3B [KO:K02067]
MMAD_55480  mammalian cell entry protein [KO:K02067]
MMAD_55490  mce3D; Mce family protein Mce3D [KO:K02067]
MMAD_55500  mammalian cell entry protein [KO:K02067]
MMAD_55510  mammalian cell entry protein [KO:K02067]
MMAD_00630  virulence factor Mce [KO:K02067]
MMAD_00640  mammalian cell entry protein [KO:K02067]
MMAD_00650  mammalian cell entry protein [KO:K02067]
MMAD_00660  mammalian cell entry protein [KO:K02067]
MMAD_00670  mammalian cell entry protein [KO:K02067]
MMAD_00680  virulence factor [KO:K02067]
MMAD_39010  ABC transporter permease [KO:K02066]
MMAD_39020  ABC transporter permease [KO:K02066]
MMAD_47650  ABC transporter permease [KO:K02066]
MMAD_47660  ABC transporter permease [KO:K02066]
MMAD_53200  ABC transporter permease [KO:K02066]
MMAD_53210  ABC transporter permease [KO:K02066]
MMAD_55440  ABC transporter permease [KO:K02066]
MMAD_55450  ABC transporter permease [KO:K02066]
MMAD_55540  putative ribonucleotide ABC transporter, ATP-binding protein [KO:K02065]
MMAD_10730  mkl; putative ribonucleotide transport ATP-binding protein mkl [KO:K02065]
MMAD_30070  xypA; xylitol-binding protein [KO:K10439]
MMAD_24200  rbsB; D-ribose ABC transporter substrate-binding protein [KO:K10439]
MMAD_30080  thpA; D-threitol-binding protein [KO:K10439]
MMAD_36670  hypothetical protein [KO:K10439]
MMAD_19310  ribose ABC transporter substrate-binding protein [KO:K10439]
MMAD_24190  ABC transporter permease [KO:K10440]
MMAD_30090  ABC transporter permease [KO:K10440]
MMAD_36650  rbsC_2; sugar ABC transporter permease [KO:K10440]
MMAD_24180  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
MMAD_30100  sugar ABC transporter [KO:K10441] [EC:7.5.2.7]
MMAD_36660  rbsA; ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
MMAD_24160  rbsD; D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
MMAD_10770  sugar ABC transporter [KO:K10552]
MMAD_19320  sugar ABC transporter substrate-binding protein [KO:K10559]
MMAD_19340  rbsC_1; ribose ABC transporter permease [KO:K10560]
MMAD_19350  ribonucleotide-diphosphate reductase subunit alpha [KO:K10561]
MMAD_19330  sugar ABC transporter ATP-binding protein [KO:K10562] [EC:7.5.2.-]
MMAD_46850  pstS; phosphate-binding protein PstS [KO:K02040]
MMAD_46840  pstC; phosphate transport system permease protein [KO:K02037]
MMAD_46830  pstA; phosphate transport system permease protein PstA [KO:K02038]
MMAD_46820  pstB; phosphate import ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
MMAD_23260  glutamate-binding protein [KO:K10005]
MMAD_23250  glutamate ABC transporter permease [KO:K10006]
MMAD_23240  glutamate ABC transporter permease [KO:K10007]
MMAD_23270  arginine ABC transporter ATP-binding protein [KO:K10008] [EC:7.4.2.1]
MMAD_50690  ABC transporter substrate-binding protein [KO:K02424 K10009]
MMAD_50700  ABC transporter ATP-binding protein [KO:K10010] [EC:7.4.2.1]
MMAD_27300  branched chain amino acid ABC transporter substrate-binding protein [KO:K01999]
MMAD_27310  branched-chain amino acid ABC transporter permease [KO:K01997]
MMAD_27320  branched-chain amino acid ABC transporter permease [KO:K01998]
MMAD_27330  ABC transporter ATP-binding protein [KO:K01995]
MMAD_27340  ABC transporter ATP-binding protein [KO:K01996]
MMAD_29000  metal ABC transporter substrate-binding protein [KO:K02073]
MMAD_29010  ABC transporter permease [KO:K02072]
MMAD_29020  metN; methionine import ATP-binding protein MetN [KO:K02071]
MMAD_04670  hypothetical protein [KO:K11959]
MMAD_40930  ABC transporter substrate-binding protein [KO:K13889]
MMAD_40900  peptide ABC transporter permease [KO:K13890]
MMAD_40910  oppC; ABC transporter permease [KO:K13891]
MMAD_40920  oppD_2; ABC transporter ATP-binding protein [KO:K13892]
MMAD_04360  ABC transporter substrate-binding protein [KO:K25286]
MMAD_04260  iron ABC transporter permease [KO:K23186]
MMAD_04270  fepG; iron-enterobactin transporter permease [KO:K23187]
MMAD_04280  ABC transporter [KO:K23188] [EC:7.2.2.17 7.2.2.-]
MMAD_36260  hypothetical protein [KO:K16785]
MMAD_51550  sugar ABC transporter permease [KO:K09690]
MMAD_51530  ABC transporter ATP-binding protein [KO:K09691] [EC:7.5.2.14]
MMAD_17450  ftsX; cell division protein FtsX [KO:K09811]
MMAD_17440  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
MMAD_41020  ABC transporter ATP-binding protein [KO:K18887]
MMAD_27190  cydC; thiol reductant ABC exporter subunit CydC [KO:K16012]
MMAD_27200  cydD; thiol reductant ABC exporter subunit CydD [KO:K16013]
MMAD_30640  ABC transporter permease [KO:K02471]
MMAD_22720  bacA_1; vitamin B12 transport ATP-binding protein BacA [KO:K02471]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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