KEGG   PATHWAY: ndt02010
Entry
ndt02010                    Pathway                                
Name
ABC transporters - Neobacillus drentensis
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
ndt02010  ABC transporters
ndt02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Neobacillus drentensis [GN:ndt]
Gene
L1999_03840  sulfate ABC transporter substrate-binding protein [KO:K23163]
L1999_03845  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
L1999_03850  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
L1999_03855  sulfate/molybdate ABC transporter ATP-binding protein [KO:K02045] [EC:7.3.2.3]
L1999_25255  substrate-binding domain-containing protein [KO:K05772]
L1999_25260  ABC transporter permease [KO:K05773]
L1999_25265  ATP-binding cassette domain-containing protein [KO:K06857] [EC:7.3.2.6]
L1999_09445  ABC transporter substrate-binding protein [KO:K15553]
L1999_09440  ABC transporter permease [KO:K15554]
L1999_09435  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
L1999_12045  ABC transporter substrate-binding protein [KO:K15598]
L1999_12040  ABC transporter permease [KO:K15599]
L1999_12035  ABC transporter ATP-binding protein [KO:K15600]
L1999_09985  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
L1999_10840  modB; molybdate ABC transporter permease subunit [KO:K02018]
L1999_18050  glycine betaine/L-proline ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
L1999_19090  ABC transporter permease subunit [KO:K05845 K05846]
L1999_19085  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
L1999_05830  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
L1999_02625  extracellular solute-binding protein [KO:K15770]
L1999_02630  ABC transporter permease subunit [KO:K15771]
L1999_02635  sugar ABC transporter permease [KO:K15772]
L1999_04020  extracellular solute-binding protein [KO:K10117]
L1999_07300  extracellular solute-binding protein [KO:K10117]
L1999_07350  ABC transporter substrate-binding protein [KO:K10117]
L1999_07355  extracellular solute-binding protein [KO:K10117]
L1999_10560  extracellular solute-binding protein [KO:K10117]
L1999_17300  extracellular solute-binding protein [KO:K10117]
L1999_27035  extracellular solute-binding protein [KO:K10117]
L1999_28485  extracellular solute-binding protein [KO:K10117]
L1999_24310  extracellular solute-binding protein [KO:K10117]
L1999_04025  sugar ABC transporter permease [KO:K10118]
L1999_07360  sugar ABC transporter permease [KO:K10118]
L1999_28480  sugar ABC transporter permease [KO:K10118]
L1999_10565  sugar ABC transporter permease [KO:K10118]
L1999_24305  sugar ABC transporter permease [KO:K10118]
L1999_04030  carbohydrate ABC transporter permease [KO:K10119]
L1999_07310  carbohydrate ABC transporter permease [KO:K10119]
L1999_07365  carbohydrate ABC transporter permease [KO:K10119]
L1999_17290  carbohydrate ABC transporter permease [KO:K10119]
L1999_24300  carbohydrate ABC transporter permease [KO:K10119]
L1999_28475  carbohydrate ABC transporter permease [KO:K10119]
L1999_26945  ABC transporter substrate-binding protein [KO:K10188]
L1999_26940  sugar ABC transporter permease [KO:K10189]
L1999_26935  carbohydrate ABC transporter permease [KO:K10190]
L1999_27465  sugar ABC transporter substrate-binding protein [KO:K17241]
L1999_27455  sugar ABC transporter permease [KO:K17242]
L1999_27450  carbohydrate ABC transporter permease [KO:K17243]
L1999_06615  extracellular solute-binding protein [KO:K17318]
L1999_07180  ABC transporter substrate-binding protein [KO:K17318]
L1999_07230  ABC transporter substrate-binding protein [KO:K17318]
L1999_09395  extracellular solute-binding protein [KO:K17318]
L1999_09605  ABC transporter substrate-binding protein [KO:K17318]
L1999_09845  ABC transporter substrate-binding protein [KO:K17318]
L1999_10935  ABC transporter substrate-binding protein [KO:K17318]
L1999_17205  ABC transporter substrate-binding protein [KO:K17318]
L1999_18005  ABC transporter substrate-binding protein [KO:K17318]
L1999_19140  extracellular solute-binding protein [KO:K17318]
L1999_24035  extracellular solute-binding protein [KO:K17318]
L1999_24255  ABC transporter substrate-binding protein [KO:K17318]
L1999_24410  ABC transporter substrate-binding protein [KO:K17318]
L1999_27310  ABC transporter substrate-binding protein [KO:K17318]
L1999_03445  ABC transporter substrate-binding protein [KO:K17318]
L1999_06620  sugar ABC transporter permease [KO:K17319]
L1999_07235  ABC transporter permease subunit [KO:K17319]
L1999_09400  ABC transporter permease subunit [KO:K17319]
L1999_18015  ABC transporter permease subunit [KO:K17319]
L1999_24405  sugar ABC transporter permease [KO:K17319]
L1999_27320  sugar ABC transporter permease [KO:K17319]
L1999_03435  ABC transporter permease subunit [KO:K17319]
L1999_06625  carbohydrate ABC transporter permease [KO:K17320]
L1999_07240  carbohydrate ABC transporter permease [KO:K17320]
L1999_09405  carbohydrate ABC transporter permease [KO:K17320]
L1999_18010  carbohydrate ABC transporter permease [KO:K17320]
L1999_24400  carbohydrate ABC transporter permease [KO:K17320]
L1999_03440  carbohydrate ABC transporter permease [KO:K17320]
L1999_17295  sugar ABC transporter permease [KO:K10201]
L1999_24315  extracellular solute-binding protein [KO:K17326]
L1999_01610  sugar-binding protein [KO:K10546]
L1999_01620  sugar ABC transporter permease [KO:K10547]
L1999_01615  sugar ABC transporter ATP-binding protein [KO:K10548] [EC:7.5.2.-]
L1999_08815  BMP family protein [KO:K07335]
L1999_08825  ABC transporter permease [KO:K23535]
L1999_08830  ABC transporter permease [KO:K23536]
L1999_08820  ABC transporter ATP-binding protein [KO:K23537]
L1999_09795  ABC transporter substrate-binding protein [KO:K10439]
L1999_10900  substrate-binding domain-containing protein [KO:K10439]
L1999_14645  sugar ABC transporter substrate-binding protein [KO:K10439]
L1999_09805  ABC transporter permease [KO:K10440]
L1999_10910  ABC transporter permease [KO:K10440]
L1999_09800  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
L1999_10905  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
L1999_01565  ABC transporter substrate-binding protein [KO:K23508]
L1999_01575  ABC transporter permease [KO:K23509]
L1999_01580  yjfF; sugar ABC transporter permease YjfF [KO:K23509]
L1999_01570  sugar ABC transporter ATP-binding protein [KO:K10820] [EC:7.5.2.9]
L1999_02700  mglB; galactose/glucose ABC transporter substrate-binding protein MglB [KO:K10540]
L1999_02710  mglC; galactose/methyl galactoside ABC transporter permease MglC [KO:K10541]
L1999_02705  mglA; galactose/methyl galactoside ABC transporter ATP-binding protein MglA [KO:K10542] [EC:7.5.2.11]
L1999_17605  rhaS; rhamnose ABC transporter substrate-binding protein [KO:K10559]
L1999_17635  autoinducer 2 ABC transporter substrate-binding protein [KO:K10559]
L1999_17615  ABC transporter permease [KO:K10560]
L1999_17610  ABC transporter permease [KO:K10561]
L1999_17620  sugar ABC transporter ATP-binding protein [KO:K10562] [EC:7.5.2.-]
L1999_10635  phosphate ABC transporter substrate-binding protein [KO:K02040]
L1999_21635  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
L1999_21630  pstA; phosphate ABC transporter permease PstA [KO:K02038]
L1999_21620  pstB; phosphate ABC transporter ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
L1999_21625  pstB; phosphate ABC transporter ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
L1999_15610  putative selenate ABC transporter substrate-binding protein [KO:K02044]
L1999_15620  ABC transporter permease subunit [KO:K02042]
L1999_15615  phosphonate ABC transporter ATP-binding protein [KO:K02041] [EC:7.3.2.2]
L1999_17015  transporter substrate-binding domain-containing protein [KO:K10036]
L1999_17010  amino acid ABC transporter permease [KO:K10037]
L1999_04300  amino acid ABC transporter permease [KO:K10037]
L1999_04305  amino acid ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
L1999_17005  amino acid ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
L1999_04725  amino acid ABC transporter substrate-binding protein [KO:K02424]
L1999_25315  amino acid ABC transporter substrate-binding protein [KO:K02424]
L1999_04730  amino acid ABC transporter permease [KO:K10009]
L1999_25310  amino acid ABC transporter permease [KO:K10009]
L1999_04735  amino acid ABC transporter ATP-binding protein [KO:K10010] [EC:7.4.2.1]
L1999_25305  amino acid ABC transporter ATP-binding protein [KO:K10010] [EC:7.4.2.1]
L1999_10760  amino acid ABC transporter substrate-binding protein [KO:K16957]
L1999_10765  amino acid ABC transporter permease [KO:K16958]
L1999_10770  amino acid ABC transporter permease [KO:K16959]
L1999_10775  amino acid ABC transporter ATP-binding protein [KO:K16960] [EC:7.4.2.1]
L1999_21105  transporter substrate-binding domain-containing protein [KO:K23059]
L1999_21100  amino acid ABC transporter permease [KO:K17077]
L1999_13510  amino acid ABC transporter ATP-binding protein [KO:K23060] [EC:7.4.2.1]
L1999_21095  amino acid ABC transporter ATP-binding protein [KO:K23060] [EC:7.4.2.1]
L1999_10070  ABC transporter substrate-binding protein [KO:K01999]
L1999_23885  substrate-binding domain-containing protein [KO:K01999]
L1999_28925  ABC transporter substrate-binding protein [KO:K01999]
L1999_02715  ABC transporter substrate-binding protein [KO:K01999]
L1999_10075  branched-chain amino acid ABC transporter permease [KO:K01997]
L1999_23870  branched-chain amino acid ABC transporter permease [KO:K01997]
L1999_28920  branched-chain amino acid ABC transporter permease [KO:K01997]
L1999_10080  branched-chain amino acid ABC transporter permease [KO:K01998]
L1999_23865  branched-chain amino acid ABC transporter permease [KO:K01998]
L1999_28915  branched-chain amino acid ABC transporter permease [KO:K01998]
L1999_10085  ABC transporter ATP-binding protein [KO:K01995]
L1999_23880  ABC transporter ATP-binding protein [KO:K01995]
L1999_28910  ABC transporter ATP-binding protein [KO:K01995]
L1999_10090  ABC transporter ATP-binding protein [KO:K01996]
L1999_23875  ABC transporter ATP-binding protein [KO:K01996]
L1999_28905  ABC transporter ATP-binding protein [KO:K01996]
L1999_25140  MetQ/NlpA family ABC transporter substrate-binding protein [KO:K02073]
L1999_25145  ABC transporter permease [KO:K02072]
L1999_25150  methionine ABC transporter ATP-binding protein [KO:K02071]
L1999_06340  peptide ABC transporter substrate-binding protein [KO:K15580]
L1999_26015  peptide ABC transporter substrate-binding protein [KO:K15580]
L1999_06345  ABC transporter permease [KO:K15581]
L1999_06350  ABC transporter permease [KO:K15582]
L1999_06355  ABC transporter ATP-binding protein [KO:K15583]
L1999_06360  ABC transporter ATP-binding protein [KO:K10823]
L1999_09065  ABC transporter ATP-binding protein [KO:K10823]
L1999_05045  ABC transporter substrate-binding protein [KO:K12368]
L1999_23615  zinc ABC transporter substrate-binding protein [KO:K09815]
L1999_28115  metal ABC transporter substrate-binding protein [KO:K09815]
L1999_21695  metal ABC transporter permease [KO:K09816]
L1999_21700  metal ABC transporter ATP-binding protein [KO:K09817] [EC:7.2.2.20]
L1999_02570  biotin transporter BioY [KO:K03523]
L1999_11695  energy-coupling factor transporter transmembrane protein EcfT [KO:K16785]
L1999_00830  energy-coupling factor transporter transmembrane protein EcfT [KO:K16785]
L1999_00820  energy-coupling factor ABC transporter ATP-binding protein [KO:K16786] [EC:7.-.-.-]
L1999_00825  energy-coupling factor ABC transporter ATP-binding protein [KO:K16787] [EC:7.-.-.-]
L1999_07385  autoinducer 2 ABC transporter substrate-binding protein [KO:K10555]
L1999_27370  lsrB; autoinducer 2 ABC transporter substrate-binding protein LsrB [KO:K10555]
L1999_27380  sugar ABC transporter permease [KO:K10556]
L1999_27375  autoinducer 2 import system permease LsrD [KO:K10557]
L1999_27385  sugar ABC transporter ATP-binding protein [KO:K10558]
L1999_15635  ABC transporter permease [KO:K11632]
L1999_02845  ABC transporter permease [KO:K11632]
L1999_15640  ABC transporter ATP-binding protein [KO:K11631]
L1999_02850  ABC transporter ATP-binding protein [KO:K11631]
L1999_21315  cytochrome c biogenesis protein [KO:K02195]
L1999_21320  heme exporter protein CcmB [KO:K02194]
L1999_25845  ftsX; permease-like cell division protein FtsX [KO:K09811]
L1999_25850  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
L1999_03500  DUF6449 domain-containing protein [KO:K16919]
L1999_03495  ABC transporter ATP-binding protein [KO:K16921]
L1999_09285  ATP-binding cassette domain-containing protein [KO:K18889]
L1999_02595  ABC transporter ATP-binding protein/permease [KO:K18889]
L1999_09290  ATP-binding cassette domain-containing protein [KO:K18890]
L1999_02600  ABC transporter ATP-binding protein/permease [KO:K18890]
L1999_15420  ABC transporter ATP-binding protein/permease [KO:K18887]
L1999_17175  ABC transporter ATP-binding protein/permease [KO:K18887]
L1999_28940  ABC transporter ATP-binding protein/permease [KO:K18887]
L1999_15415  ABC transporter ATP-binding protein/permease [KO:K18888]
L1999_17170  ABC transporter ATP-binding protein/permease [KO:K18888]
L1999_28935  ABC transporter ATP-binding protein/permease [KO:K18888]
L1999_15510  abc-f; ABC-F type ribosomal protection protein [KO:K18231]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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