KEGG   PATHWAY: palz04814
Entry
palz04814                   Pathway                                
Name
Motor proteins - Populus alba (white poplar)
Class
Cellular Processes; Cell motility
Pathway map
palz04814  Motor proteins
palz04814

Organism
Populus alba (white poplar) [GN:palz]
Gene
118063061  dynein light chain LC6, flagellar outer arm-like [KO:K10418]
118032849  dynein light chain 1, cytoplasmic [KO:K10418]
118046419  dynein light chain, cytoplasmic-like [KO:K10418]
118036028  dynein light chain, cytoplasmic-like [KO:K10418]
118047387  dynein light chain 1, cytoplasmic-like [KO:K10418]
118047532  dynein light chain 2, cytoplasmic [KO:K10418]
118048476  dynein light chain LC6, flagellar outer arm-like [KO:K10418]
118058610  dynein light chain LC6, flagellar outer arm-like [KO:K10418]
118038052  dynein light chain 1, cytoplasmic-like [KO:K10418]
118038176  dynein light chain 1, cytoplasmic-like [KO:K10418]
118038325  dynein light chain 1, cytoplasmic-like [KO:K10418]
118061167  dynein light chain, cytoplasmic-like [KO:K10418]
118028624  uncharacterized protein LOC118028624 [KO:K10418]
118047729  F-actin-capping protein subunit alpha-like [KO:K10364]
118061153  F-actin-capping protein subunit alpha-like [KO:K10364]
118061773  probable F-actin-capping protein subunit beta [KO:K10365]
118051796  tubulin alpha chain-like [KO:K07374]
118031408  tubulin alpha chain-like [KO:K07374]
118031832  tubulin alpha chain-like [KO:K07374]
118032703  tubulin alpha-6 chain-like [KO:K07374]
118056751  tubulin alpha-5 chain-like [KO:K07374]
118036430  tubulin alpha-3 chain-like [KO:K07374]
118059074  tubulin alpha chain [KO:K07374]
118059329  tubulin alpha-3 chain isoform X1 [KO:K07374]
118052699  tubulin beta chain-like [KO:K07375]
118053014  tubulin beta-5 chain [KO:K07375]
118032920  tubulin beta-2 chain [KO:K07375]
118033292  tubulin beta-5 chain-like [KO:K07375]
118033674  tubulin beta-1 chain [KO:K07375]
118033692  tubulin beta chain-like [KO:K07375]
118055615  tubulin beta-4 chain-like [KO:K07375]
118055616  tubulin beta-4 chain-like [KO:K07375]
118035247  tubulin beta-2 chain-like [KO:K07375]
118035896  tubulin beta chain-like [KO:K07375]
118047130  tubulin beta-4 chain-like [KO:K07375]
118047131  tubulin beta-4 chain-like [KO:K07375]
118048399  tubulin beta chain-like [KO:K07375]
118027644  tubulin beta-5 chain-like [KO:K07375]
118027645  tubulin beta-1 chain [KO:K07375]
118028477  tubulin beta chain-like [KO:K07375]
118028488  tubulin beta-5 chain-like [KO:K07375]
118050989  tubulin beta-3 chain-like [KO:K07375]
118029491  tubulin beta chain [KO:K07375]
118062029  tubulin beta chain-like [KO:K07375]
118041549  tubulin gamma-1 chain [KO:K10389]
118057693  tubulin gamma-2 chain isoform X1 [KO:K10389]
118041290  kinesin-like protein KIN-UB [KO:K10396]
118063030  kinesin-like protein KIN-5D [KO:K10398]
118030702  kinesin-like protein KIN-5C [KO:K10398]
118053355  kinesin-like protein KIN-5B [KO:K10398]
118053764  kinesin-like protein KIN-5D [KO:K10398]
118045695  kinesin-like protein KIN-5D [KO:K10398]
118045940  kinesin-like protein KIN-5D [KO:K10398]
118062607  kinesin-like protein KIN-5C [KO:K10398]
118063123  kinesin-like protein KIN-7G [KO:K11498]
118052747  kinesin-like protein KIN-7F isoform X1 [KO:K11498]
118053114  kinesin-like protein KIN-7O [KO:K11498]
118043872  kinesin-like protein KIN-7K, chloroplastic isoform X1 [KO:K11498]
118046340  kinesin-like protein NACK1 isoform X1 [KO:K11498]
118057187  kinesin-like protein KIN-7C, mitochondrial isoform X1 [KO:K11498]
118037034  kinesin-like protein KIN-7N isoform X1 [KO:K11498]
118037367  kinesin-like protein NACK1 [KO:K11498]
118048508  kinesin-like protein NACK2 [KO:K11498]
118058953  kinesin-like protein KIN-7D, mitochondrial [KO:K11498]
118058973  kinesin-like protein KIN-7E isoform X1 [KO:K11498]
118039705  kinesin-like protein KIN-7D, mitochondrial isoform X1 [KO:K11498]
118050193  kinesin-like protein KIN-7K, chloroplastic [KO:K11498]
118050617  kinesin-like protein KIN-7F [KO:K11498]
118029821  kinesin-like protein KIN-7G isoform X1 [KO:K11498]
118030207  kinesin-like protein KIN-8A isoform X1 [KO:K26157]
118056272  kinesin-like protein KIN-10C isoform X1 [KO:K10403]
118032413  kinesin-like protein KIN-12E isoform X1 [KO:K10400]
118043256  LOW QUALITY PROTEIN: kinesin-like protein KIN-12C [KO:K10400]
118043797  kinesin-like protein KIN-12B isoform X1 [KO:K10400]
118056804  kinesin-like protein KIN-12F isoform X1 [KO:K10400]
118038755  kinesin-like protein KIN-12E [KO:K10400]
118050717  kinesin-like protein KIN-12D [KO:K10400]
118040657  kinesin-like protein KIN-12B [KO:K10400]
118032838  kinesin-like protein KIN-13A [KO:K10393]
118046223  kinesin-like protein KIN-13B isoform X1 [KO:K10393]
118036996  kinesin-like protein KIN-13A isoform X1 [KO:K10393]
118038094  kinesin-like protein KIN-13B [KO:K10393]
118051704  kinesin-like protein KIN-13B [KO:K10393]
118063001  kinesin-like protein KIN-14N isoform X1 [KO:K10405]
118031645  kinesin-like protein KIN-14C isoform X1 [KO:K10405]
118042787  kinesin-like protein KIN-14C isoform X1 [KO:K10405]
118047459  kinesin-like protein KIN-14N [KO:K10405]
118030194  kinesin-like protein KIN-14J [KO:K10406]
118031284  kinesin-like protein KIN-14R [KO:K10406]
118053159  kinesin-like protein KIN-14L [KO:K10406]
118033694  kinesin-like protein KIN-14J isoform X1 [KO:K10406]
118045109  kinesin-like protein KIN-14S isoform X1 [KO:K10406]
118035684  kinesin-like protein KIN-14Q [KO:K10406]
118046827  kinesin-like protein KIN-14I [KO:K10406]
118036666  kinesin-like protein KIN-14Q isoform X1 [KO:K10406]
118047693  kinesin-like protein KIN-14G [KO:K10406]
118037342  kinesin-like protein KIN-14C [KO:K10406]
118037719  kinesin-like protein KIN-14F [KO:K10406]
118028467  kinesin-like protein KIN-14J isoform X1 [KO:K10406]
118060782  kinesin-like protein KIN-14S [KO:K10406]
118060959  kinesin-like protein KIN-14G [KO:K10406]
118029463  kinesin-like protein KIN-14F [KO:K10406]
118041016  kinesin-like protein KIN-14I [KO:K10406]
118030581  myosin-15 isoform X1 [KO:K10357]
118053768  myosin-12 isoform X1 [KO:K10357]
118044014  myosin-9 isoform X1 [KO:K10357]
118047534  myosin-2-like [KO:K10357]
118047979  myosin-17-like isoform X1 [KO:K10357]
118057826  myosin-6-like isoform X1 [KO:K10357]
118058599  myosin-2 [KO:K10357]
118038264  myosin-9-like isoform X1 [KO:K10357]
118038833  myosin-1-like [KO:K10357]
118049425  myosin-9 isoform X1 [KO:K10357]
118049624  myosin-1-like isoform X1 [KO:K10357]
118050000  myosin-6 [KO:K10357]
118040878  myosin-17-like [KO:K10357]
118062810  actin-7 [KO:K10355]
118052409  actin-97 [KO:K10355]
118052490  actin [KO:K10355]
118043891  actin [KO:K10355]
118055331  actin-7 [KO:K10355]
118046737  actin-66-like isoform X1 [KO:K10355]
118048094  actin-104-like [KO:K10355]
118059722  actin-1-like [KO:K10355]
Reference
  Authors
Hirokawa N, Niwa S, Tanaka Y
  Title
Molecular motors in neurons: transport mechanisms and roles in brain function, development, and disease.
  Journal
Neuron 68:610-38 (2010)
DOI:10.1016/j.neuron.2010.09.039
Reference
PMID:25470043 (PDB:4RH7)
  Authors
Schmidt H, Zalyte R, Urnavicius L, Carter AP
  Title
Structure of human cytoplasmic dynein-2 primed for its power stroke.
  Journal
Nature 518:435-438 (2015)
DOI:10.1038/nature14023
Reference
PMID:22398446 (PDB:3VKG 3VKH)
  Authors
Kon T, Oyama T, Shimo-Kon R, Imamula K, Shima T, Sutoh K, Kurisu G
  Title
The 2.8 A crystal structure of the dynein motor domain.
  Journal
Nature 484:345-50 (2012)
DOI:10.1038/nature10955
Reference
PMID:22997337 (PDB:3J1T 3J1U)
  Authors
Redwine WB, Hernandez-Lopez R, Zou S, Huang J, Reck-Peterson SL, Leschziner AE
  Title
Structural basis for microtubule binding and release by dynein.
  Journal
Science 337:1532-1536 (2012)
DOI:10.1126/science.1224151
Reference
  Authors
Gibbs KL, Greensmith L, Schiavo G
  Title
Regulation of Axonal Transport by Protein Kinases.
  Journal
Trends Biochem Sci 40:597-610 (2015)
DOI:10.1016/j.tibs.2015.08.003
Reference
PMID:28602352 (PDB:5NUG 5NVS 5NVU 5NW4)
  Authors
Zhang K, Foster HE, Rondelet A, Lacey SE, Bahi-Buisson N, Bird AW, Carter AP
  Title
Cryo-EM Reveals How Human Cytoplasmic Dynein Is Auto-inhibited and Activated.
  Journal
Cell 169:1303-1314.e18 (2017)
DOI:10.1016/j.cell.2017.05.025
Reference
PMID:25814576 (PDB:5ADX 5AFR 5AFU)
  Authors
Urnavicius L, Zhang K, Diamant AG, Motz C, Schlager MA, Yu M, Patel NA, Robinson CV, Carter AP
  Title
The structure of the dynactin complex and its interaction with dynein.
  Journal
Science 347:1441-1446 (2015)
DOI:10.1126/science.aaa4080
Reference
PMID:29420470 (PDB:5OWO 6F1T 6F1U 6F1V 6F1Y 6F1Z 6F38 6F3A)
  Authors
Urnavicius L, Lau CK, Elshenawy MM, Morales-Rios E, Motz C, Yildiz A, Carter AP
  Title
Cryo-EM shows how dynactin recruits two dyneins for faster movement.
  Journal
Nature 554:202-206 (2018)
DOI:10.1038/nature25462
Reference
  Authors
Reck-Peterson SL, Redwine WB, Vale RD, Carter AP
  Title
The cytoplasmic dynein transport machinery and its many cargoes.
  Journal
Nat Rev Mol Cell Biol 19:382-398 (2018)
DOI:10.1038/s41580-018-0004-3
Reference
PMID:23434508 (PDB:3J2U)
  Authors
Asenjo AB, Chatterjee C, Tan D, DePaoli V, Rice WJ, Diaz-Avalos R, Silvestry M, Sosa H
  Title
Structural model for tubulin recognition and deformation by kinesin-13 microtubule depolymerases.
  Journal
Cell Rep 3:759-68 (2013)
DOI:10.1016/j.celrep.2013.01.030
Reference
PMID:10338210 (PDB:1B7T)
  Authors
Houdusse A, Kalabokis VN, Himmel D, Szent-Gyorgyi AG, Cohen C
  Title
Atomic structure of scallop myosin subfragment S1 complexed with MgADP: a novel conformation of the myosin head.
  Journal
Cell 97:459-70 (1999)
DOI:10.1016/s0092-8674(00)80756-4
Reference
PMID:9428521 (PDB:3KIN)
  Authors
Kozielski F, Sack S, Marx A, Thormahlen M, Schonbrunn E, Biou V, Thompson A, Mandelkow EM, Mandelkow E
  Title
The crystal structure of dimeric kinesin and implications for microtubule-dependent motility.
  Journal
Cell 91:985-94 (1997)
DOI:10.1016/s0092-8674(00)80489-4
Reference
PMID:8316857 (PDB:2MYS)
  Authors
Rayment I, Rypniewski WR, Schmidt-Base K, Smith R, Tomchick DR, Benning MM, Winkelmann DA, Wesenberg G, Holden HM
  Title
Three-dimensional structure of myosin subfragment-1: a molecular motor.
  Journal
Science 261:50-8 (1993)
DOI:10.1126/science.8316857
Reference
  Authors
Parker D, Bryant Z, Delp SL
  Title
Coarse-Grained Structural Modeling of Molecular Motors Using Multibody Dynamics.
  Journal
Cell Mol Bioeng 2:366-374 (2009)
DOI:10.1007/s12195-009-0084-4
Reference
  Authors
Dominguez R, Holmes KC
  Title
Actin structure and function.
  Journal
Annu Rev Biophys 40:169-86 (2011)
DOI:10.1146/annurev-biophys-042910-155359
Reference
PMID:31919429 (PDB:6KN7 6KN8)
  Authors
Yamada Y, Namba K, Fujii T
  Title
Cardiac muscle thin filament structures reveal calcium regulatory mechanism.
  Journal
Nat Commun 11:153 (2020)
DOI:10.1038/s41467-019-14008-1
Reference
  Authors
Kruppa AJ, Buss F
  Title
Motor proteins at the mitochondria-cytoskeleton interface.
  Journal
J Cell Sci 134:239092 (2021)
DOI:10.1242/jcs.226084
KO pathway
ko04814   
LinkDB

DBGET integrated database retrieval system