KEGG   PATHWAY: panc02010
Entry
panc02010                   Pathway                                
Name
ABC transporters - Paenisporosarcina antarctica
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
panc02010  ABC transporters
panc02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Paenisporosarcina antarctica [GN:panc]
Gene
E2636_03470  aliphatic sulfonate ABC transporter substrate-binding protein [KO:K15553]
E2636_03475  ABC transporter permease [KO:K15554]
E2636_03480  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
E2636_08100  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
E2636_08095  modB; molybdate ABC transporter permease subunit [KO:K02018]
E2636_08090  ATP-binding cassette domain-containing protein [KO:K02017] [EC:7.3.2.5]
E2636_05970  Fe(3+) ABC transporter substrate-binding protein [KO:K02012]
E2636_05975  iron ABC transporter permease [KO:K02011]
E2636_05980  ABC transporter ATP-binding protein [KO:K02010] [EC:7.2.2.7]
E2636_03445  glycine betaine ABC transporter substrate-binding protein [KO:K02002]
E2636_08345  glycine/betaine ABC transporter [KO:K02002]
E2636_03440  proline/glycine betaine ABC transporter permease [KO:K02001]
E2636_08350  proline/glycine betaine ABC transporter permease [KO:K02001]
E2636_03435  glycine betaine/L-proline ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
E2636_08355  glycine betaine/L-proline ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
E2636_01835  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
E2636_12105  glycine betaine ABC transporter substrate-binding protein [KO:K05845]
E2636_03230  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
E2636_03710  glycine/betaine ABC transporter substrate-binding protein [KO:K05845]
E2636_01830  ABC transporter permease [KO:K05846]
E2636_12110  ABC transporter permease [KO:K05846]
E2636_12120  ABC transporter permease [KO:K05846]
E2636_03220  ABC transporter permease [KO:K05846]
E2636_03225  ABC transporter permease [KO:K05846]
E2636_03705  ABC transporter permease [KO:K05846]
E2636_01825  ATP-binding cassette domain-containing protein [KO:K05847] [EC:7.6.2.9]
E2636_12115  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
E2636_03235  ABC transporter ATP-binding protein [KO:K05847] [EC:7.6.2.9]
E2636_03700  ATP-binding cassette domain-containing protein [KO:K05847] [EC:7.6.2.9]
E2636_11980  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
E2636_06600  extracellular solute-binding protein [KO:K15770]
E2636_06605  sugar ABC transporter permease [KO:K15771]
E2636_06610  sugar ABC transporter permease [KO:K15772]
E2636_12290  ABC transporter substrate-binding protein [KO:K10236]
E2636_12285  ABC transporter permease subunit [KO:K10237]
E2636_12280  carbohydrate ABC transporter permease [KO:K10238]
E2636_03005  sugar ABC transporter substrate-binding protein [KO:K10546]
E2636_03015  sugar ABC transporter permease [KO:K10547]
E2636_03010  sugar ABC transporter ATP-binding protein [KO:K10548] [EC:7.5.2.-]
E2636_09960  BMP family ABC transporter substrate-binding protein [KO:K07335]
E2636_09950  ABC transporter permease [KO:K23535]
E2636_09945  ABC transporter permease [KO:K23536]
E2636_09955  ABC transporter ATP-binding protein [KO:K23537]
E2636_16535  D-ribose ABC transporter substrate-binding protein [KO:K10439]
E2636_03020  sugar ABC transporter substrate-binding protein [KO:K10439]
E2636_16540  rbsC; ribose ABC transporter permease [KO:K10440]
E2636_16545  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
E2636_03035  xylF; D-xylose ABC transporter substrate-binding protein [KO:K10543]
E2636_07075  PstS family phosphate ABC transporter substrate-binding protein [KO:K02040]
E2636_07080  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
E2636_07085  pstA; phosphate ABC transporter permease PstA [KO:K02038]
E2636_07090  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
E2636_08735  basic amino acid ABC transporter substrate-binding protein [KO:K10036]
E2636_08730  amino acid ABC transporter permease [KO:K10037]
E2636_08725  amino acid ABC transporter ATP-binding protein [KO:K10038] [EC:7.4.2.1]
E2636_03570  amino acid ABC transporter substrate-binding protein [KO:K09969]
E2636_03575  ABC transporter permease subunit [KO:K09970]
E2636_03580  amino acid ABC transporter permease [KO:K09971]
E2636_03585  amino acid ABC transporter ATP-binding protein [KO:K09972] [EC:7.4.2.1]
E2636_14910  amino acid ABC transporter substrate-binding protein [KO:K02424]
E2636_15290  transporter substrate-binding domain-containing protein [KO:K02424]
E2636_08715  transporter substrate-binding domain-containing protein [KO:K02424]
E2636_14905  amino acid ABC transporter permease [KO:K10009]
E2636_15280  amino acid ABC transporter permease [KO:K10009]
E2636_08720  amino acid ABC transporter permease [KO:K10009]
E2636_14900  amino acid ABC transporter ATP-binding protein [KO:K10010] [EC:7.4.2.1]
E2636_15275  amino acid ABC transporter ATP-binding protein [KO:K10010] [EC:7.4.2.1]
E2636_11815  ABC transporter substrate-binding protein [KO:K01999]
E2636_08295  ABC transporter substrate-binding protein [KO:K01999]
E2636_03760  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
E2636_07880  ABC transporter permease [KO:K01999]
E2636_11825  branched-chain amino acid ABC transporter permease [KO:K01997]
E2636_08315  branched-chain amino acid ABC transporter permease [KO:K01997]
E2636_03755  branched-chain amino acid ABC transporter permease [KO:K01997]
E2636_07895  branched-chain amino acid ABC transporter permease [KO:K01997]
E2636_08310  branched-chain amino acid ABC transporter permease [KO:K01998]
E2636_03750  branched-chain amino acid ABC transporter permease [KO:K01998]
E2636_07900  branched-chain amino acid ABC transporter permease [KO:K01998]
E2636_11820  branched-chain amino acid ABC transporter permease [KO:K01998]
E2636_11835  ABC transporter ATP-binding protein [KO:K01995]
E2636_08305  ABC transporter ATP-binding protein [KO:K01995]
E2636_03745  ABC transporter ATP-binding protein [KO:K01995]
E2636_07885  ABC transporter ATP-binding protein [KO:K01995]
E2636_08300  ABC transporter ATP-binding protein [KO:K01996]
E2636_03740  ABC transporter ATP-binding protein [KO:K01996]
E2636_07890  ABC transporter ATP-binding protein [KO:K01996]
E2636_11810  ABC transporter ATP-binding protein [KO:K01996]
E2636_18565  hypothetical protein [KO:K02073]
E2636_00055  hypothetical protein [KO:K02073]
E2636_00320  hypothetical protein [KO:K02073]
E2636_05015  MetQ/NlpA family ABC transporter substrate-binding protein [KO:K02073]
E2636_00050  ABC transporter permease [KO:K02072]
E2636_05010  ABC transporter permease [KO:K02072]
E2636_00045  methionine ABC transporter ATP-binding protein [KO:K02071]
E2636_05005  methionine ABC transporter ATP-binding protein [KO:K02071]
E2636_11385  peptide ABC transporter substrate-binding protein [KO:K15580]
E2636_03615  peptide ABC transporter substrate-binding protein [KO:K15580]
E2636_11380  ABC transporter permease [KO:K15581]
E2636_03620  ABC transporter permease [KO:K15581]
E2636_11375  ABC transporter permease [KO:K15582]
E2636_03625  ABC transporter permease [KO:K15582]
E2636_11370  ABC transporter ATP-binding protein [KO:K15583]
E2636_03630  ABC transporter ATP-binding protein [KO:K15583]
E2636_11365  ABC transporter ATP-binding protein [KO:K10823]
E2636_14335  iron-siderophore ABC transporter substrate-binding protein [KO:K23227]
E2636_14330  iron ABC transporter permease [KO:K23228]
E2636_09820  metal ABC transporter substrate-binding protein [KO:K19975]
E2636_09815  metal ABC transporter permease [KO:K19976]
E2636_09810  metal ABC transporter ATP-binding protein [KO:K19973] [EC:7.2.2.5]
E2636_05455  adhesin [KO:K09815]
E2636_07025  metal ABC transporter permease [KO:K09816]
E2636_07020  ABC transporter ATP-binding protein [KO:K09817] [EC:7.2.2.20]
E2636_11770  biotin transporter BioY [KO:K03523]
E2636_15520  biotin transporter BioY [KO:K03523]
E2636_03635  biotin transporter BioY [KO:K03523]
E2636_00090  cobalt transporter [KO:K16785]
E2636_00965  energy-coupling factor transporter transmembrane protein EcfT [KO:K16785]
E2636_00955  energy-coupling factor ABC transporter ATP-binding protein [KO:K16786] [EC:7.-.-.-]
E2636_00960  energy-coupling factor ABC transporter ATP-binding protein [KO:K16787] [EC:7.-.-.-]
E2636_12035  ABC transporter permease [KO:K09692]
E2636_12030  tagH; teichoic acids export ABC transporter ATP-binding subunit TagH [KO:K09693] [EC:7.5.2.4]
E2636_03100  ABC transporter permease [KO:K09813]
E2636_03095  ABC transporter ATP-binding protein [KO:K09814] [EC:7.6.2.-]
E2636_16805  ABC transporter permease [KO:K11632]
E2636_16810  ABC transporter ATP-binding protein [KO:K11631]
E2636_16190  ABC transporter permease [KO:K19084]
E2636_16195  ABC transporter ATP-binding protein [KO:K19083]
E2636_08830  ABC transporter permease [KO:K19341]
E2636_08825  ABC transporter ATP-binding protein [KO:K19340]
E2636_11575  ABC transporter permease [KO:K09811]
E2636_11580  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
E2636_07785  ATP-binding cassette domain-containing protein [KO:K18889]
E2636_04365  ABC transporter ATP-binding protein [KO:K18889]
E2636_10845  ABC transporter ATP-binding protein [KO:K18889]
E2636_07790  ATP-binding cassette domain-containing protein [KO:K18890]
E2636_04370  ABC transporter ATP-binding protein [KO:K18890]
E2636_10840  ABC transporter ATP-binding protein [KO:K18890]
E2636_01915  ABC transporter ATP-binding protein [KO:K18104] [EC:7.6.2.2]
E2636_15410  ABC transporter ATP-binding protein [KO:K18887]
E2636_14040  ABC transporter ATP-binding protein [KO:K18887]
E2636_15405  ABC transporter ATP-binding protein [KO:K18888]
E2636_14035  ABC transporter ATP-binding protein [KO:K18888]
E2636_09170  cydC; thiol reductant ABC exporter subunit CydC [KO:K16012]
E2636_09175  cydD; thiol reductant ABC exporter subunit CydD [KO:K16013]
E2636_16970  abc-f; ABC-F type ribosomal protection protein [KO:K18231]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
LinkDB

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