Entry
Name
ABC transporters - Pseudomonas aeruginosa PA7
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Pseudomonas aeruginosa PA7 [GN:
pap ]
Gene
PSPA7_1169 tauA; taurine ABC transporter, periplasmic binding protein [KO:K15551 ]
PSPA7_0265 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [KO:K15554 ]
PSPA7_3427 modA; molybdate ABC transporter, periplasmic molybdate-binding protein [KO:K02020 ]
PSPA7_5962 putative binding protein component of ABC iron transporter [KO:K02012 ]
PSPA7_5961 binding-protein-dependent transport systems inner membrane component [KO:K02011 ]
PSPA7_3929 putative periplasmic spermidine/putrescine-binding protein [KO:K11073 ]
PSPA7_2607 putative periplasmic spermidine/putrescine-binding protein [KO:K11073 ]
PSPA7_3989 putative periplasmic spermidine/putrescine-binding protein [KO:K11073 ]
PSPA7_2922 putative ATP-binding component of ABC maltose/mannitol transporter [KO:K10111 ] [EC:7.5.2.-]
PSPA7_1942 putative ATP-binding component of ABC transporter [KO:K10112 ] [EC:7.5.2.-]
PSPA7_2925 putative binding protein component of ABC maltose/mannitol transporter [KO:K10227 ]
PSPA7_2924 putative binding-protein-dependent maltose/mannitol transport protein [KO:K10228 ]
PSPA7_2923 putative binding-protein-dependent maltose/mannitol transport protein [KO:K10229 ]
PSPA7_1939 putative binding protein component of ABC sugar transporter [KO:K17315 ]
PSPA7_3346 rbsB; binding protein component precursor of ABC ribose transporter [KO:K10439 ]
PSPA7_3344 rbsC; membrane protein component of ABC ribose transporter [KO:K10440 ]
PSPA7_6147 pstC; membrane protein component of ABC phosphate transporter [KO:K02037 ]
PSPA7_6146 transmembrane component of the phosphate specific transport complex [KO:K02038 ]
PSPA7_1747 phnE2; phosphonate ABC transporter, permease protein PhnE [KO:K02042 ]
PSPA7_1803 phnE1; phosphonate ABC transporter, permease protein PhnE [KO:K02042 ]
PSPA7_5637 putative permease of ABC branched chain amino acid transporter [KO:K01997 ]
PSPA7_5636 putative permease of ABC branched-chain amino acid transporter [KO:K01998 ]
PSPA7_5580 branched-chain amino acid ABC transporter, permease protein [KO:K11960 ]
PSPA7_6093 putative binding protein component of ABC dipeptide transporter [KO:K12368 ]
PSPA7_5120 putative ATP-binding component of ABC dipeptide transporter [KO:K12372 ]
PSPA7_3485 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA [KO:K13893 ]
PSPA7_2174 lolD; lipoprotein releasing system, ATP-binding protein [KO:K09810 ] [EC:7.6.2.-]
PSPA7_4420 ABC transporter, permease/ATP-binding protein [KO:K14698 ] [EC:7.-.-.-]
PSPA7_4419 ABC transporter, permease/ATP-binding protein [KO:K14699 ] [EC:7.-.-.-]
PSPA7_2870 putative ATP-binding/permease fusion ABC transporter [KO:K05685 ] [EC:7.6.2.-]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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