KEGG   PATHWAY: pau00920
Entry
pau00920                    Pathway                                
Name
Sulfur metabolism - Pseudomonas aeruginosa UCBPP-PA14
Description
Sulfur is an essential element for life and the metabolism of organic sulfur compounds plays an important role in the global sulfur cycle. Sulfur occurs in various oxidation states ranging from +6 in sulfate to -2 in sulfide (H2S). Sulfate reduction can occur in both an energy consuming assimilatory pathway and an energy producing dissimilatory pathway. The assimilatory pathway, which is found in a wide range of organisms, produces reduced sulfur compounds for the biosynthesis of S-containing amino acids and does not lead to direct excretion of sulfide. In the dissimilatory pathway, which is restricted to obligatory anaerobic bacterial and archaeal lineages, sulfate (or sulfur) is the terminal electron acceptor of the respiratory chain producing large quantities of inorganic sulfide. Both pathways start from the activation of sulfate by reaction with ATP to form adenylyl sulfate (APS). In the assimilatory pathway [MD:M00176] APS is converted to 3'-phosphoadenylyl sulfate (PAPS) and then reduced to sulfite, and sulfite is further reduced to sulfide by the assimilatory sulfite reductase. In the dissimilatory pathway [MD:M00596] APS is directly reduced to sulfite, and sulfite is further reduced to sulfide by the dissimilatory sulfite reductase. The capacity for oxidation of sulfur is quite widespread among bacteria and archaea, comprising phototrophs and chemolithoautotrophs. The SOX (sulfur-oxidation) system [MD:M00595] is a well-known sulfur oxidation pathway and is found in both photosynthetic and non-photosynthetic sulfur-oxidizing bacteria. Green sulfur bacteria and purple sulfur bacteria carry out anoxygenic photosynthesis with reduced sulfur compounds such as sulfide and elemental sulfur, as well as thiosulfate (in some species with the SOX system), as the electron donor for photoautotrophic growth. In some chemolithoautotrophic sulfur oxidizers (such as Thiobacillus denitrificans), it has been suggested that dissimilatory sulfur reduction enzymes operate in the reverse direction, forming a sulfur oxidation pathway from sulfite to APS and then to sulfate.
Class
Metabolism; Energy metabolism
Pathway map
pau00920  Sulfur metabolism
pau00920

Module
pau_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pau00920]
pau_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pau00920]
Other DBs
GO: 0006790
Organism
Pseudomonas aeruginosa UCBPP-PA14 [GN:pau]
Gene
PA14_45110  cysP; sulfate-binding protein of ABC transporter [KO:K02048]
PA14_03700  sbp; sulfate-binding protein precursor [KO:K23163]
PA14_03680  cysT; sulfate transport protein CysT [KO:K02046]
PA14_03670  cysW; sulfate transport protein CysW [KO:K02047]
PA14_03650  cysA; sulfate transport protein CysA [KO:K02045] [EC:7.3.2.3]
PA14_12920  probable ABC-type taurine transporter, periplasmic component [KO:K15551]
PA14_12960  probable permease of ABC taurine transporter [KO:K15552]
PA14_12940  probable ATP-binding component of ABC taurine tran [KO:K10831] [EC:7.6.2.7]
PA14_12970  tauD; TauD [KO:K03119] [EC:1.14.11.17]
PA14_19500  ssuA; putative sulfonate binding protein [KO:K15553]
PA14_30540  putative periplasmic aliphatic sulfonate-binding protein [KO:K15553]
PA14_30550  ssuA; putative periplasmic aliphatic sulfonate-binding protein [KO:K15553]
PA14_19540  ssuA; putative ABC-type transporter periplasmic sulfonate-binding protein [KO:K15553]
PA14_02360  atsR; putative binding protein component of ABC transporter [KO:K15553]
PA14_30520  putative periplasmic aliphatic sulfonate-binding protein [KO:K15553]
PA14_30470  putative periplasmic aliphatic sulfonate-binding protein [KO:K15553]
PA14_34770  putative ABC transporter, periplasmic binding protein [KO:K15553]
PA14_19570  ssuC; putative aliphatic sulfonates transport permease protein [KO:K15554]
PA14_19510  ssuC; putative aliphatic sulfonates ABC transporter [KO:K15554]
PA14_02340  atsB; putative permease of ABC transporter [KO:K15554]
PA14_34790  putative permease of ABC transporter [KO:K15554]
PA14_19580  ssuB; putative aliphatic sulfonate transport ATP-binding protein [KO:K15555] [EC:7.6.2.14]
PA14_02330  atsC; putative BC-type transporter, ATP-binding component [KO:K15555] [EC:7.6.2.14]
PA14_19520  ssuB; putative sulfonate transport system, ATP-binding protein [KO:K15555] [EC:7.6.2.14]
PA14_34780  putative ABC transporter ATP-binding component [KO:K15555] [EC:7.6.2.14]
PA14_34190  msuD; FMNH2-dependent methanesulfonate sulfonatase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PA14_19560  ssuD; putative sulfonate monooxygenase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PA14_30460  putative flavin-dependent oxidoreductase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PA14_30490  putative lavin-dependent oxidoreductase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
PA14_19530  ssuE; putative NADH-dependent FMN reductase [KO:K00299] [EC:1.5.1.38]
PA14_34180  msuE; NADH-dependent FMN reductase [KO:K00299] [EC:1.5.1.38]
PA14_57710  cysN; ATP sulfurylase GTP-binding subunit/APS kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
PA14_57720  cysD; ATP sulfurylase small subunit [KO:K00957] [EC:2.7.7.4]
PA14_68370  cysQ; 3'(2'),5'-bisphosphate nucleotidase [KO:K01082] [EC:3.1.3.7]
PA14_41840  cysH; 3'-phosphoadenosine-5'-phosphosulfate reductase [KO:K00390] [EC:1.8.4.8 1.8.4.10]
PA14_58560  piuB; probable oxidoreductase [KO:K00380] [EC:1.8.1.2]
PA14_40770  cysI; sulfite reductase [KO:K00381] [EC:1.8.1.2]
PA14_10550  cysI; putative sulfite or nitrite reductas [KO:K00381] [EC:1.8.1.2]
PA14_31350  conserved hypothetical protein [KO:K17218] [EC:1.8.5.4]
PA14_34330  putative transmembrane protein [KO:K17218] [EC:1.8.5.4]
PA14_47500  sseA; 3-mercaptopyruvate sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
PA14_65480  rhdA; thiosulfate sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
PA14_07690  glpE; putative thiosulfate/cyanide sulfurtransferase [KO:K02439] [EC:2.8.1.1]
PA14_14700  cysE; serine O-acetyltransferase [KO:K00640] [EC:2.3.1.30]
PA14_54880  putative serine acetyltransferase [KO:K00640] [EC:2.3.1.30]
PA14_29110  cysK; cysteine synthase A [KO:K01738] [EC:2.5.1.47]
PA14_50660  putative cysteine synthase [KO:K01738] [EC:2.5.1.47]
PA14_05080  metX; homoserine O-acetyltransferase [KO:K00641] [EC:2.3.1.31 2.3.1.46]
PA14_23930  metZ; o-succinylhomoserine sulfhydrylase [KO:K10764] [EC:2.5.1.-]
PA14_12710  possible Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase [KO:K17228] [EC:1.14.14.35]
PA14_09660  putative AMP-binding enzyme [KO:K20034] [EC:6.2.1.44]
PA14_35940  Putative Acyl-CoA synthetase [KO:K20034] [EC:6.2.1.44]
PA14_47600  putative acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PA14_06620  putative acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PA14_68510  putative acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PA14_09630  putative acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PA14_06640  putative acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
PA14_06600  putative acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
Compound
C00033  Acetate
C00042  Succinate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00065  L-Serine
C00084  Acetaldehyde
C00087  Sulfur
C00094  Sulfite
C00097  L-Cysteine
C00155  L-Homocysteine
C00224  Adenylyl sulfate
C00245  Taurine
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00320  Thiosulfate
C00409  Methanethiol
C00580  Dimethyl sulfide
C00979  O-Acetyl-L-serine
C01118  O-Succinyl-L-homoserine
C01861  Trithionate
C02084  Tetrathionate
C03920  2-(Methylthio)ethanesulfonate
C04022  S,S-Dimethyl-beta-propiothetin
C08276  3-(Methylthio)propanoate
C11142  Dimethyl sulfone
C11143  Dimethyl sulfoxide
C11145  Methanesulfonic acid
C15521  Alkanesulfonate
C17267  S-Sulfanylglutathione
C19692  Polysulfide
C20870  3-(Methylthio)propanoyl-CoA
C20955  3-(Methylthio)acryloyl-CoA
C22834  Protein-trisulfide
Reference
  Authors
Grein F, Ramos AR, Venceslau SS, Pereira IA
  Title
Unifying concepts in anaerobic respiration: Insights from dissimilatory sulfur metabolism.
  Journal
Biochim Biophys Acta 1827:145-60 (2013)
DOI:10.1016/j.bbabio.2012.09.001
Reference
  Authors
Fauque GD, Barton LL
  Title
Hemoproteins in dissimilatory sulfate- and sulfur-reducing prokaryotes.
  Journal
Adv Microb Physiol 60:1-90 (2012)
DOI:10.1016/B978-0-12-398264-3.00001-2
Reference
  Authors
Sakurai H, Ogawa T, Shiga M, Inoue K
  Title
Inorganic sulfur oxidizing system in green sulfur bacteria.
  Journal
Photosynth Res 104:163-76 (2010)
DOI:10.1007/s11120-010-9531-2
Reference
  Authors
Falkenby LG, Szymanska M, Holkenbrink C, Habicht KS, Andersen JS, Miller M, Frigaard NU
  Title
Quantitative proteomics of Chlorobaculum tepidum: insights into the sulfur metabolism of a phototrophic green sulfur bacterium.
  Journal
FEMS Microbiol Lett 323:142-50 (2011)
DOI:10.1111/j.1574-6968.2011.02370.x
Reference
  Authors
Gregersen LH, Bryant DA, Frigaard NU
  Title
Mechanisms and evolution of oxidative sulfur metabolism in green sulfur bacteria.
  Journal
Front Microbiol 2:116 (2011)
DOI:10.3389/fmicb.2011.00116
Reference
  Authors
Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP.
  Title
The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans.
  Journal
J Bacteriol 188:1473-88 (2006)
DOI:10.1128/JB.188.4.1473-1488.2006
Reference
PMID:9695921
  Authors
Pott AS, Dahl C
  Title
Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur.
  Journal
Microbiology 144 ( Pt 7):1881-94 (1998)
DOI:10.1099/00221287-144-7-1881
Reference
  Authors
Frigaard NU, Dahl C
  Title
Sulfur metabolism in phototrophic sulfur bacteria.
  Journal
Adv Microb Physiol 54:103-200 (2009)
DOI:10.1016/S0065-2911(08)00002-7
Related
pathway
pau00260  Glycine, serine and threonine metabolism
pau00270  Cysteine and methionine metabolism
pau00680  Methane metabolism
pau00720  Other carbon fixation pathways
KO pathway
ko00920   
LinkDB

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