KEGG   PATHWAY: pbro02010
Entry
pbro02010                   Pathway                                
Name
ABC transporters - Pseudonocardia broussonetiae
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
pbro02010  ABC transporters
pbro02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Pseudonocardia broussonetiae [GN:pbro]
Gene
HOP40_00390  solute-binding protein [KO:K05772]
HOP40_00395  ABC transporter permease [KO:K05773]
HOP40_16555  ABC transporter substrate-binding protein [KO:K15553]
HOP40_16545  ABC transporter permease [KO:K15554]
HOP40_16550  ATP-binding cassette domain-containing protein [KO:K15555] [EC:7.6.2.14]
HOP40_10895  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
HOP40_10900  modB; molybdate ABC transporter permease subunit [KO:K02018]
HOP40_10905  ATP-binding cassette domain-containing protein [KO:K02017] [EC:7.3.2.5]
HOP40_00560  extracellular solute-binding protein [KO:K02012]
HOP40_07730  extracellular solute-binding protein [KO:K02012]
HOP40_00545  iron ABC transporter permease [KO:K02011]
HOP40_07735  iron ABC transporter permease [KO:K02011]
HOP40_00540  ABC transporter ATP-binding protein [KO:K02010] [EC:7.2.2.7]
HOP40_07740  ABC transporter ATP-binding protein [KO:K02010] [EC:7.2.2.7]
HOP40_15995  glycine/betaine ABC transporter substrate-binding protein [KO:K02002]
HOP40_15985  ABC transporter permease subunit [KO:K02001]
HOP40_15990  betaine/proline/choline family ABC transporter ATP-binding protein [KO:K02000] [EC:7.6.2.9]
HOP40_07170  glycine betaine ABC transporter substrate-binding protein [KO:K05845]
HOP40_13860  ABC transporter substrate-binding protein [KO:K05845]
HOP40_07175  ABC transporter permease [KO:K05846]
HOP40_07185  ABC transporter permease [KO:K05846]
HOP40_13850  ABC transporter permease subunit [KO:K05846]
HOP40_13855  ABC transporter permease [KO:K05846]
HOP40_07180  ATP-binding cassette domain-containing protein [KO:K05847] [EC:7.6.2.9]
HOP40_13845  ATP-binding cassette domain-containing protein [KO:K05847] [EC:7.6.2.9]
HOP40_23750  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
HOP40_06150  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
HOP40_05155  sugar ABC transporter substrate-binding protein [KO:K10227]
HOP40_05150  sugar ABC transporter permease [KO:K10228]
HOP40_05145  carbohydrate ABC transporter permease [KO:K10229]
HOP40_23765  extracellular solute-binding protein [KO:K10236]
HOP40_23760  sugar ABC transporter permease [KO:K10237]
HOP40_23755  carbohydrate ABC transporter permease [KO:K10238]
HOP40_24370  extracellular solute-binding protein [KO:K10240]
HOP40_24365  sugar ABC transporter permease [KO:K10241]
HOP40_24360  carbohydrate ABC transporter permease [KO:K10242]
HOP40_12040  MCE family protein [KO:K02067]
HOP40_12045  MCE family protein [KO:K02067]
HOP40_12050  MCE family protein [KO:K02067]
HOP40_12055  MCE family protein [KO:K02067]
HOP40_12060  MCE family protein [KO:K02067]
HOP40_12065  MCE family protein [KO:K02067]
HOP40_12030  ABC transporter permease [KO:K02066]
HOP40_12035  ABC transporter permease [KO:K02066]
HOP40_12025  ABC transporter ATP-binding protein [KO:K02065]
HOP40_12785  BMP family ABC transporter substrate-binding protein [KO:K07335]
HOP40_12795  ABC transporter permease [KO:K23535]
HOP40_12800  ABC transporter permease [KO:K23536]
HOP40_12790  ABC transporter ATP-binding protein [KO:K23537]
HOP40_19630  sugar ABC transporter substrate-binding protein [KO:K10439]
HOP40_22905  substrate-binding domain-containing protein [KO:K10439]
HOP40_00475  ABC transporter permease [KO:K10440]
HOP40_19640  ABC transporter permease [KO:K10440]
HOP40_22900  ABC transporter permease [KO:K10440]
HOP40_19635  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
HOP40_00480  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
HOP40_22895  sugar ABC transporter ATP-binding protein [KO:K10441] [EC:7.5.2.7]
HOP40_22415  ABC transporter substrate-binding protein [KO:K23508]
HOP40_22400  yjfF; sugar ABC transporter permease YjfF [KO:K23509]
HOP40_22405  ABC transporter permease [KO:K23509]
HOP40_22410  sugar ABC transporter ATP-binding protein [KO:K10820] [EC:7.5.2.9]
HOP40_28920  substrate-binding domain-containing protein [KO:K10543]
HOP40_28910  ABC transporter permease [KO:K10544]
HOP40_28915  sugar ABC transporter ATP-binding protein [KO:K10545] [EC:7.5.2.10]
HOP40_05555  pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
HOP40_05550  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
HOP40_05545  pstA; phosphate ABC transporter permease PstA [KO:K02038]
HOP40_05540  phosphate ABC transporter ATP-binding protein [KO:K02036] [EC:7.3.2.1]
HOP40_29500  phosphate/phosphite/phosphonate ABC transporter substrate-binding protein [KO:K02044]
HOP40_29510  phnE; phosphonate ABC transporter, permease protein PhnE [KO:K02042]
HOP40_29505  ATP-binding cassette domain-containing protein [KO:K02041] [EC:7.3.2.2]
HOP40_17340  glutamate ABC transporter substrate-binding protein [KO:K10005]
HOP40_17335  amino acid ABC transporter permease [KO:K10006]
HOP40_17330  amino acid ABC transporter permease [KO:K10007]
HOP40_17345  amino acid ABC transporter ATP-binding protein [KO:K10008] [EC:7.4.2.1]
HOP40_15890  ABC transporter substrate-binding protein [KO:K01999]
HOP40_27880  ABC transporter substrate-binding protein [KO:K01999]
HOP40_28120  branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999]
HOP40_31025  ABC transporter substrate-binding protein [KO:K01999]
HOP40_33770  ABC transporter substrate-binding protein [KO:K01999]
HOP40_27875  branched-chain amino acid ABC transporter permease [KO:K01997]
HOP40_28115  branched-chain amino acid ABC transporter permease [KO:K01997]
HOP40_31020  branched-chain amino acid ABC transporter permease [KO:K01997]
HOP40_33765  branched-chain amino acid ABC transporter permease [KO:K01997]
HOP40_10605  branched-chain amino acid ABC transporter permease [KO:K01997]
HOP40_15895  branched-chain amino acid ABC transporter permease [KO:K01997]
HOP40_27870  branched-chain amino acid ABC transporter permease [KO:K01998]
HOP40_28110  branched-chain amino acid ABC transporter permease [KO:K01998]
HOP40_31015  branched-chain amino acid ABC transporter permease [KO:K01998]
HOP40_33760  branched-chain amino acid ABC transporter ATP-binding protein/permease [KO:K01995 K01998]
HOP40_10610  branched-chain amino acid ABC transporter permease [KO:K01998]
HOP40_27865  ABC transporter ATP-binding protein [KO:K01995]
HOP40_28105  ABC transporter ATP-binding protein [KO:K01995]
HOP40_31010  ABC transporter ATP-binding protein [KO:K01995]
HOP40_10600  ABC transporter ATP-binding protein [KO:K01995]
HOP40_15900  ATP-binding cassette domain-containing protein [KO:K01995 K01996]
HOP40_27860  ABC transporter ATP-binding protein [KO:K01996]
HOP40_28100  ABC transporter ATP-binding protein [KO:K01996]
HOP40_31005  ABC transporter ATP-binding protein [KO:K01996]
HOP40_33755  ABC transporter ATP-binding protein [KO:K01996]
HOP40_10595  ABC transporter ATP-binding protein [KO:K01996]
HOP40_29045  substrate-binding domain-containing protein [KO:K11959]
HOP40_01955  ABC transporter substrate-binding protein [KO:K11959]
HOP40_08835  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
HOP40_08840  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
HOP40_08845  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
HOP40_08850  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
HOP40_08855  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
HOP40_03225  ABC transporter substrate-binding protein [KO:K15580]
HOP40_03230  ABC transporter permease [KO:K15581]
HOP40_03235  ABC transporter permease [KO:K15582]
HOP40_03240  ABC transporter ATP-binding protein [KO:K15583]
HOP40_03245  dipeptide ABC transporter ATP-binding protein [KO:K10823]
HOP40_19225  iron-siderophore ABC transporter substrate-binding protein [KO:K25286]
HOP40_17810  ABC transporter substrate-binding protein [KO:K25286]
HOP40_23160  iron-siderophore ABC transporter substrate-binding protein [KO:K25286]
HOP40_30600  iron-siderophore ABC transporter substrate-binding protein [KO:K25286]
HOP40_19205  iron-siderophore ABC transporter substrate-binding protein [KO:K25286]
HOP40_19265  ABC transporter substrate-binding protein [KO:K25286]
HOP40_29805  iron chelate uptake ABC transporter family permease subunit [KO:K23186]
HOP40_29800  iron chelate uptake ABC transporter family permease subunit [KO:K23187]
HOP40_29795  ABC transporter ATP-binding protein [KO:K23188] [EC:7.2.2.17 7.2.2.-]
HOP40_04675  zinc ABC transporter solute-binding protein [KO:K11707]
HOP40_04690  metal ABC transporter permease [KO:K11709]
HOP40_04680  metal ABC transporter ATP-binding protein [KO:K11710] [EC:7.2.2.5]
HOP40_24665  hypothetical protein [KO:K02009]
HOP40_29075  energy-coupling factor ABC transporter substrate-binding protein [KO:K02009]
HOP40_24670  energy-coupling factor ABC transporter permease [KO:K02007]
HOP40_29080  energy-coupling factor ABC transporter permease [KO:K02007]
HOP40_24660  cbiQ; cobalt ECF transporter T component CbiQ [KO:K02008]
HOP40_29070  cbiQ; cobalt ECF transporter T component CbiQ [KO:K02008]
HOP40_24655  ABC transporter ATP-binding protein [KO:K02006]
HOP40_29065  ATP-binding cassette domain-containing protein [KO:K02006]
HOP40_07125  ABC transporter permease [KO:K09690]
HOP40_07130  ABC transporter ATP-binding protein [KO:K09691] [EC:7.5.2.14]
HOP40_16165  ABC transporter permease [KO:K09694]
HOP40_16170  ABC transporter permease [KO:K09694]
HOP40_16160  ABC transporter ATP-binding protein [KO:K09695]
HOP40_03850  ABC transporter permease [KO:K18233]
HOP40_03855  ATP-binding cassette domain-containing protein [KO:K18232]
HOP40_02410  ABC transporter permease [KO:K09811]
HOP40_02415  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
HOP40_22815  ABC transporter ATP-binding protein [KO:K18887]
HOP40_22820  ABC transporter ATP-binding protein [KO:K18888]
HOP40_25745  cydC; thiol reductant ABC exporter subunit CydC [KO:K16012]
HOP40_26590  cydC; thiol reductant ABC exporter subunit CydC [KO:K16012]
HOP40_25740  cydD; thiol reductant ABC exporter subunit CydD [KO:K16013]
HOP40_26595  cydD; thiol reductant ABC exporter subunit CydD [KO:K16013]
HOP40_27115  cydD; thiol reductant ABC exporter subunit CydD [KO:K16014]
HOP40_28770  ABC-F family ATP-binding cassette domain-containing protein [KO:K18230]
HOP40_08830  ABC-F family ATP-binding cassette domain-containing protein [KO:K18230]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   
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