KEGG   PATHWAY: pdul01100
Entry
pdul01100                   Pathway                                
Name
Metabolic pathways - Prunus dulcis (almond)
Class
Pathway map
pdul01100  Metabolic pathways
pdul01100

Module
pdul_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pdul01100]
pdul_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pdul01100]
pdul_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pdul01100]
pdul_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pdul01100]
pdul_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pdul01100]
pdul_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pdul01100]
pdul_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pdul01100]
pdul_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pdul01100]
pdul_M00012  Glyoxylate cycle [PATH:pdul01100]
pdul_M00015  Proline biosynthesis, glutamate => proline [PATH:pdul01100]
pdul_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pdul01100]
pdul_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pdul01100]
pdul_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pdul01100]
pdul_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pdul01100]
pdul_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pdul01100]
pdul_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pdul01100]
pdul_M00026  Histidine biosynthesis, PRPP => histidine [PATH:pdul01100]
pdul_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:pdul01100]
pdul_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pdul01100]
pdul_M00034  Methionine salvage pathway [PATH:pdul01100]
pdul_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pdul01100]
pdul_M00039  Monolignol biosynthesis, phenylalanine/tyrosine => monolignol [PATH:pdul01100]
pdul_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pdul01100]
pdul_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pdul01100]
pdul_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pdul01100]
pdul_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pdul01100]
pdul_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pdul01100]
pdul_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pdul01100]
pdul_M00055  N-glycan precursor biosynthesis [PATH:pdul01100]
pdul_M00073  N-glycan precursor trimming [PATH:pdul01100]
pdul_M00081  Pectin degradation [PATH:pdul01100]
pdul_M00082  Fatty acid biosynthesis, initiation [PATH:pdul01100]
pdul_M00083  Fatty acid biosynthesis, elongation [PATH:pdul01100]
pdul_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pdul01100]
pdul_M00087  beta-Oxidation [PATH:pdul01100]
pdul_M00089  Triacylglycerol biosynthesis [PATH:pdul01100]
pdul_M00092  Phosphatidylethanolamine (PE) biosynthesis, ethanolamine => PE [PATH:pdul01100]
pdul_M00095  C5 isoprenoid biosynthesis, mevalonate pathway [PATH:pdul01100]
pdul_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pdul01100]
pdul_M00098  Acylglycerol degradation [PATH:pdul01100]
pdul_M00100  Sphingosine degradation [PATH:pdul01100]
pdul_M00112  Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol [PATH:pdul01100]
pdul_M00113  Jasmonic acid biosynthesis [PATH:pdul01100]
pdul_M00114  Ascorbate biosynthesis, plants, fructose-6P => ascorbate [PATH:pdul01100]
pdul_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pdul01100]
pdul_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pdul01100]
pdul_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pdul01100]
pdul_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pdul01100]
pdul_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pdul01100]
pdul_M00132  Inositol phosphate metabolism, Ins(1,3,4)P3 => phytate [PATH:pdul01100]
pdul_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:pdul01100]
pdul_M00137  Flavanone biosynthesis, phenylalanine => naringenin [PATH:pdul01100]
pdul_M00138  Flavonoid biosynthesis, naringenin => pelargonidin [PATH:pdul01100]
pdul_M00145  NAD(P)H:quinone oxidoreductase, chloroplasts and cyanobacteria [PATH:pdul01100]
pdul_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pdul01100]
pdul_M00161  Photosystem II [PATH:pdul01100]
pdul_M00163  Photosystem I [PATH:pdul01100]
pdul_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:pdul01100]
pdul_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pdul01100]
pdul_M00169  CAM (Crassulacean acid metabolism), light [PATH:pdul01100]
pdul_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:pdul01100]
pdul_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:pdul01100]
pdul_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:pdul01100]
pdul_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pdul01100]
pdul_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdul01100]
pdul_M00366  C10-C20 isoprenoid biosynthesis, plants [PATH:pdul01100]
pdul_M00368  Ethylene biosynthesis, methionine => ethylene [PATH:pdul01100]
pdul_M00371  Castasterone biosynthesis, campesterol => castasterone [PATH:pdul01100]
pdul_M00372  Abscisic acid biosynthesis, beta-carotene => abscisic acid [PATH:pdul01100]
pdul_M00415  Fatty acid elongation in endoplasmic reticulum [PATH:pdul01100]
pdul_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pdul01100]
pdul_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:pdul01100]
pdul_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pdul01100]
pdul_M00532  Photorespiration [PATH:pdul01100]
pdul_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pdul01100]
pdul_M00555  Betaine biosynthesis, choline => betaine [PATH:pdul01100]
pdul_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pdul01100]
pdul_M00621  Glycine cleavage system [PATH:pdul01100]
pdul_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pdul01100]
pdul_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pdul01100]
pdul_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pdul01100]
pdul_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pdul01100]
pdul_M00882  Lipoic acid biosynthesis, eukaryotes, octanoyl-ACP => dihydrolipoyl-H [PATH:pdul01100]
pdul_M00892  UDP-N-acetyl-D-glucosamine biosynthesis, eukaryotes, glucose => UDP-GlcNAc [PATH:pdul01100]
pdul_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:pdul01100]
pdul_M00910  Phenylalanine biosynthesis, chorismate => arogenate => phenylalanine [PATH:pdul01100]
pdul_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pdul01100]
pdul_M00917  Phytosterol biosynthesis, squalene 2,3-epoxide => campesterol/sitosterol [PATH:pdul01100]
pdul_M00927  Gibberellin A12 biosynthesis, GAPP => GA12 [PATH:pdul01100]
pdul_M00928  Gibberellin A4/A1 biosynthesis, GA12/GA53 => GA4/GA1 [PATH:pdul01100]
pdul_M00932  Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol [PATH:pdul01100]
pdul_M00933  Plastoquinone biosynthesis, homogentisate + solanesyl-PP => plastoquinol [PATH:pdul01100]
pdul_M00936  Melatonin biosynthesis, plants, tryptophan => serotonin => melatonin [PATH:pdul01100]
pdul_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pdul01100]
pdul_M00940  Flavanone biosynthesis, p-coumaroyl-CoA => liquiritigenin [PATH:pdul01100]
pdul_M00970  Proline degradation, proline => glutamate [PATH:pdul01100]
pdul_M00972  Proline metabolism [PATH:pdul01100]
Organism
Prunus dulcis (almond) [GN:pdul]
Related
pathway
pdul00010  Glycolysis / Gluconeogenesis
pdul00020  Citrate cycle (TCA cycle)
pdul00030  Pentose phosphate pathway
pdul00040  Pentose and glucuronate interconversions
pdul00051  Fructose and mannose metabolism
pdul00052  Galactose metabolism
pdul00053  Ascorbate and aldarate metabolism
pdul00061  Fatty acid biosynthesis
pdul00062  Fatty acid elongation
pdul00071  Fatty acid degradation
pdul00073  Cutin, suberine and wax biosynthesis
pdul00100  Steroid biosynthesis
pdul00130  Ubiquinone and other terpenoid-quinone biosynthesis
pdul00190  Oxidative phosphorylation
pdul00195  Photosynthesis
pdul00196  Photosynthesis - antenna proteins
pdul00220  Arginine biosynthesis
pdul00230  Purine metabolism
pdul00232  Caffeine metabolism
pdul00240  Pyrimidine metabolism
pdul00250  Alanine, aspartate and glutamate metabolism
pdul00260  Glycine, serine and threonine metabolism
pdul00261  Monobactam biosynthesis
pdul00270  Cysteine and methionine metabolism
pdul00280  Valine, leucine and isoleucine degradation
pdul00290  Valine, leucine and isoleucine biosynthesis
pdul00300  Lysine biosynthesis
pdul00310  Lysine degradation
pdul00330  Arginine and proline metabolism
pdul00340  Histidine metabolism
pdul00350  Tyrosine metabolism
pdul00360  Phenylalanine metabolism
pdul00380  Tryptophan metabolism
pdul00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pdul00410  beta-Alanine metabolism
pdul00430  Taurine and hypotaurine metabolism
pdul00440  Phosphonate and phosphinate metabolism
pdul00450  Selenocompound metabolism
pdul00460  Cyanoamino acid metabolism
pdul00470  D-Amino acid metabolism
pdul00480  Glutathione metabolism
pdul00500  Starch and sucrose metabolism
pdul00510  N-Glycan biosynthesis
pdul00511  Other glycan degradation
pdul00513  Various types of N-glycan biosynthesis
pdul00514  Other types of O-glycan biosynthesis
pdul00520  Amino sugar and nucleotide sugar metabolism
pdul00531  Glycosaminoglycan degradation
pdul00543  Exopolysaccharide biosynthesis
pdul00561  Glycerolipid metabolism
pdul00562  Inositol phosphate metabolism
pdul00563  Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pdul00564  Glycerophospholipid metabolism
pdul00565  Ether lipid metabolism
pdul00590  Arachidonic acid metabolism
pdul00591  Linoleic acid metabolism
pdul00592  alpha-Linolenic acid metabolism
pdul00600  Sphingolipid metabolism
pdul00601  Glycosphingolipid biosynthesis - lacto and neolacto series
pdul00603  Glycosphingolipid biosynthesis - globo and isoglobo series
pdul00604  Glycosphingolipid biosynthesis - ganglio series
pdul00620  Pyruvate metabolism
pdul00630  Glyoxylate and dicarboxylate metabolism
pdul00640  Propanoate metabolism
pdul00650  Butanoate metabolism
pdul00660  C5-Branched dibasic acid metabolism
pdul00670  One carbon pool by folate
pdul00710  Carbon fixation by Calvin cycle
pdul00730  Thiamine metabolism
pdul00740  Riboflavin metabolism
pdul00750  Vitamin B6 metabolism
pdul00760  Nicotinate and nicotinamide metabolism
pdul00770  Pantothenate and CoA biosynthesis
pdul00780  Biotin metabolism
pdul00785  Lipoic acid metabolism
pdul00790  Folate biosynthesis
pdul00860  Porphyrin metabolism
pdul00900  Terpenoid backbone biosynthesis
pdul00901  Indole alkaloid biosynthesis
pdul00902  Monoterpenoid biosynthesis
pdul00904  Diterpenoid biosynthesis
pdul00905  Brassinosteroid biosynthesis
pdul00906  Carotenoid biosynthesis
pdul00908  Zeatin biosynthesis
pdul00909  Sesquiterpenoid and triterpenoid biosynthesis
pdul00910  Nitrogen metabolism
pdul00920  Sulfur metabolism
pdul00940  Phenylpropanoid biosynthesis
pdul00941  Flavonoid biosynthesis
pdul00942  Anthocyanin biosynthesis
pdul00943  Isoflavonoid biosynthesis
pdul00944  Flavone and flavonol biosynthesis
pdul00950  Isoquinoline alkaloid biosynthesis
pdul00960  Tropane, piperidine and pyridine alkaloid biosynthesis
pdul00965  Betalain biosynthesis
pdul00966  Glucosinolate biosynthesis
pdul00999  Biosynthesis of various plant secondary metabolites
pdul01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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