KEGG   PATHWAY: pdul00010
Entry
pdul00010                   Pathway                                
Name
Glycolysis / Gluconeogenesis - Prunus dulcis (almond)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
pdul00010  Glycolysis / Gluconeogenesis
pdul00010

Module
pdul_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pdul00010]
pdul_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pdul00010]
pdul_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pdul00010]
pdul_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pdul00010]
Other DBs
GO: 0006096 0006094
Organism
Prunus dulcis (almond) [GN:pdul]
Gene
117621533  hexokinase-1-like [KO:K00844] [EC:2.7.1.1]
117633717  hexokinase-1-like isoform X1 [KO:K00844] [EC:2.7.1.1]
117624487  hexokinase-3 [KO:K00844] [EC:2.7.1.1]
117615931  hexokinase-2, chloroplastic [KO:K00844] [EC:2.7.1.1]
117625876  glucose-6-phosphate isomerase, cytosolic isoform X1 [KO:K01810] [EC:5.3.1.9]
117638374  glucose-6-phosphate isomerase 1, chloroplastic [KO:K01810] [EC:5.3.1.9]
117619415  ATP-dependent 6-phosphofructokinase 4, chloroplastic isoform X1 [KO:K00850] [EC:2.7.1.11]
117632073  ATP-dependent 6-phosphofructokinase 5, chloroplastic [KO:K00850] [EC:2.7.1.11]
117621295  ATP-dependent 6-phosphofructokinase 6-like isoform X1 [KO:K00850] [EC:2.7.1.11]
117633866  ATP-dependent 6-phosphofructokinase 6-like [KO:K00850] [EC:2.7.1.11]
117624042  ATP-dependent 6-phosphofructokinase 2 [KO:K00850] [EC:2.7.1.11]
117614132  ATP-dependent 6-phosphofructokinase 6 isoform X1 [KO:K00850] [EC:2.7.1.11]
117621519  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta-like isoform X1 [KO:K00895] [EC:2.7.1.90]
117624441  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta [KO:K00895] [EC:2.7.1.90]
117627664  pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha isoform X1 [KO:K00895] [EC:2.7.1.90]
117631386  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
117636417  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
117636689  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
117636691  fructose-1,6-bisphosphatase, chloroplastic-like [KO:K03841] [EC:3.1.3.11]
117629903  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
117633002  fructose-bisphosphate aldolase 1, cytoplasmic-like [KO:K01623] [EC:4.1.2.13]
117633664  fructose-bisphosphate aldolase 1, cytoplasmic isoform X1 [KO:K01623] [EC:4.1.2.13]
117633665  fructose-bisphosphate aldolase, cytoplasmic isozyme [KO:K01623] [EC:4.1.2.13]
117633725  fructose-bisphosphate aldolase 1, chloroplastic-like isoform X1 [KO:K01623] [EC:4.1.2.13]
117626235  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
117636924  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
117617318  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
117633080  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
117636546  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
117618808  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
117624175  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic-like [KO:K00134] [EC:1.2.1.12]
117627715  glyceraldehyde-3-phosphate dehydrogenase, cytosolic-like [KO:K00134] [EC:1.2.1.12]
117630128  phosphoglycerate kinase-like isoform X1 [KO:K00927] [EC:2.7.2.3]
117624064  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
117631170  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase-like [KO:K01834] [EC:5.4.2.11]
117635688  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase-like [KO:K01834] [EC:5.4.2.11]
117634382  phosphoglycerate mutase-like protein 4 isoform X1 [KO:K15634] [EC:5.4.2.11]
117634383  phosphoglycerate mutase-like protein 4 isoform X1 [KO:K15634] [EC:5.4.2.11]
117631026  2,3-bisphosphoglycerate-independent phosphoglycerate mutase [KO:K15633] [EC:5.4.2.12]
117618745  enolase [KO:K01689] [EC:4.2.1.11]
117632244  cytosolic enolase 3 [KO:K01689] [EC:4.2.1.11]
117633671  enolase [KO:K01689] [EC:4.2.1.11]
117627298  enolase 1, chloroplastic [KO:K01689] [EC:4.2.1.11]
117628392  pyruvate kinase isozyme G, chloroplastic isoform X1 [KO:K00873] [EC:2.7.1.40]
117617049  plastidial pyruvate kinase 2 isoform X1 [KO:K00873] [EC:2.7.1.40]
117617597  pyruvate kinase 1, cytosolic-like [KO:K00873] [EC:2.7.1.40]
117630123  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
117633882  pyruvate kinase 1, cytosolic [KO:K00873] [EC:2.7.1.40]
117624063  pyruvate kinase, cytosolic isozyme-like [KO:K00873] [EC:2.7.1.40]
117625747  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
117625748  pyruvate kinase, cytosolic isozyme [KO:K00873] [EC:2.7.1.40]
117614859  pyruvate kinase isozyme A, chloroplastic [KO:K00873] [EC:2.7.1.40]
117638128  pyruvate kinase isozyme A, chloroplastic-like isoform X1 [KO:K00873] [EC:2.7.1.40]
117613909  pyruvate, phosphate dikinase, chloroplastic [KO:K01006] [EC:2.7.9.1]
117618804  pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic [KO:K00161] [EC:1.2.4.1]
117631419  pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [KO:K00161] [EC:1.2.4.1]
117613996  pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial [KO:K00162] [EC:1.2.4.1]
117625925  pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like [KO:K00162] [EC:1.2.4.1]
117616270  dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [KO:K00627] [EC:2.3.1.12]
117617576  dihydrolipoyllysine-residue acetyltransferase component 1 of pyruvate dehydrogenase complex, mitochondrial isoform X1 [KO:K00627] [EC:2.3.1.12]
117622213  dihydrolipoyllysine-residue acetyltransferase component 3 of pyruvate dehydrogenase complex, mitochondrial-like [KO:K00627] [EC:2.3.1.12]
117636470  dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex, chloroplastic [KO:K00627] [EC:2.3.1.12]
117630502  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
117616079  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
117629346  L-lactate dehydrogenase B-like [KO:K00016] [EC:1.1.1.27]
117616001  L-lactate dehydrogenase A-like [KO:K00016] [EC:1.1.1.27]
117628535  pyruvate decarboxylase 1-like [KO:K01568] [EC:4.1.1.1]
117631283  pyruvate decarboxylase 1-like [KO:K01568] [EC:4.1.1.1]
117632782  pyruvate decarboxylase 2 [KO:K01568] [EC:4.1.1.1]
117624410  pyruvate decarboxylase 1 [KO:K01568] [EC:4.1.1.1]
117618476  LOW QUALITY PROTEIN: CYP enzymes assisting alcohol dehydrogenase-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
117636152  alcohol dehydrogenase-like 7 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
117636442  alcohol dehydrogenase-like 7 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
117636594  alcohol dehydrogenase class-3 isoform X1 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
117612246  alcohol dehydrogenase [KO:K18857] [EC:1.1.1.1]
117636293  alcohol dehydrogenase-like [KO:K18857] [EC:1.1.1.1]
117637892  alcohol dehydrogenase 1 [KO:K18857] [EC:1.1.1.1]
117637893  alcohol dehydrogenase 1-like [KO:K18857] [EC:1.1.1.1]
117638868  alcohol dehydrogenase 1 [KO:K18857] [EC:1.1.1.1]
117638869  alcohol dehydrogenase 1-like [KO:K18857] [EC:1.1.1.1]
117627849  alcohol dehydrogenase-like 3 [KO:K00001] [EC:1.1.1.1]
117627483  alcohol dehydrogenase-like 6 isoform X1 [KO:K00001] [EC:1.1.1.1]
117630955  NADPH-dependent aldo-keto reductase, chloroplastic-like isoform X1 [KO:K00002] [EC:1.1.1.2]
117631179  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
117631180  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
117631183  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
117631821  NADPH-dependent aldo-keto reductase, chloroplastic-like [KO:K00002] [EC:1.1.1.2]
117634812  aldo-keto reductase family 4 member C10-like [KO:K00002] [EC:1.1.1.2]
117628407  aldehyde dehydrogenase family 2 member B4, mitochondrial [KO:K00128] [EC:1.2.1.3]
117630060  aldehyde dehydrogenase family 2 member B7, mitochondrial-like [KO:K00128] [EC:1.2.1.3]
117621190  aldehyde dehydrogenase family 3 member H1 isoform X1 [KO:K00128] [EC:1.2.1.3]
117633525  aldehyde dehydrogenase family 3 member F1 isoform X1 [KO:K00128] [EC:1.2.1.3]
117625871  aldehyde dehydrogenase family 3 member H1-like isoform X1 [KO:K00128] [EC:1.2.1.3]
117634377  aldehyde dehydrogenase family 7 member A1 isoform X1 [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
117612465  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
117632361  acetate/butyrate--CoA ligase AAE7, peroxisomal [KO:K01913] [EC:6.2.1.1 6.2.1.2]
117628091  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
117622510  aldose 1-epimerase-like [KO:K01785] [EC:5.1.3.3]
117626957  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
117628789  phosphoglucomutase, cytoplasmic [KO:K01835] [EC:5.4.2.2]
117617771  phosphoglucomutase, chloroplastic [KO:K01835] [EC:5.4.2.2]
117628794  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
117618649  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
117622949  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
117623254  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
117635948  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
117615881  putative glucose-6-phosphate 1-epimerase [KO:K01792] [EC:5.1.3.15]
117619714  multiple inositol polyphosphate phosphatase 1 [KO:K03103] [EC:3.1.3.62 3.1.3.80]
117634827  NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [KO:K00131] [EC:1.2.1.9]
117630836  phosphoenolpyruvate carboxykinase (ATP)-like isoform X1 [KO:K01610] [EC:4.1.1.49]
117630837  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
117615036  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
pdul00020  Citrate cycle (TCA cycle)
pdul00030  Pentose phosphate pathway
pdul00500  Starch and sucrose metabolism
pdul00620  Pyruvate metabolism
pdul00640  Propanoate metabolism
pdul00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

DBGET integrated database retrieval system