KEGG   PATHWAY: pfer01100
Entry
pfer01100                   Pathway                                
Name
Metabolic pathways - Paludibaculum fermentans
Class
Pathway map
pfer01100  Metabolic pathways
pfer01100

Module
pfer_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pfer01100]
pfer_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pfer01100]
pfer_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pfer01100]
pfer_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pfer01100]
pfer_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pfer01100]
pfer_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pfer01100]
pfer_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pfer01100]
pfer_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pfer01100]
pfer_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pfer01100]
pfer_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pfer01100]
pfer_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pfer01100]
pfer_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pfer01100]
pfer_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pfer01100]
pfer_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pfer01100]
pfer_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pfer01100]
pfer_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pfer01100]
pfer_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pfer01100]
pfer_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pfer01100]
pfer_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pfer01100]
pfer_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pfer01100]
pfer_M00063  CMP-KDO biosynthesis [PATH:pfer01100]
pfer_M00082  Fatty acid biosynthesis, initiation [PATH:pfer01100]
pfer_M00083  Fatty acid biosynthesis, elongation [PATH:pfer01100]
pfer_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pfer01100]
pfer_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:pfer01100]
pfer_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pfer01100]
pfer_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pfer01100]
pfer_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pfer01100]
pfer_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pfer01100]
pfer_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pfer01100]
pfer_M00155  Cytochrome c oxidase, prokaryotes [PATH:pfer01100]
pfer_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pfer01100]
pfer_M00169  CAM (Crassulacean acid metabolism), light [PATH:pfer01100]
pfer_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pfer01100]
pfer_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pfer01100]
pfer_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pfer01100]
pfer_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:pfer01100]
pfer_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pfer01100]
pfer_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pfer01100]
pfer_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pfer01100]
pfer_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pfer01100]
pfer_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pfer01100]
pfer_M00621  Glycine cleavage system [PATH:pfer01100]
pfer_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pfer01100]
pfer_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:pfer01100]
pfer_M00793  dTDP-L-rhamnose biosynthesis [PATH:pfer01100]
pfer_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pfer01100]
pfer_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pfer01100]
pfer_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pfer01100]
pfer_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pfer01100]
pfer_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:pfer01100]
pfer_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:pfer01100]
pfer_M00970  Proline degradation, proline => glutamate [PATH:pfer01100]
pfer_M00972  Proline metabolism [PATH:pfer01100]
Organism
Paludibaculum fermentans [GN:pfer]
Related
pathway
pfer00010  Glycolysis / Gluconeogenesis
pfer00020  Citrate cycle (TCA cycle)
pfer00030  Pentose phosphate pathway
pfer00040  Pentose and glucuronate interconversions
pfer00051  Fructose and mannose metabolism
pfer00052  Galactose metabolism
pfer00053  Ascorbate and aldarate metabolism
pfer00061  Fatty acid biosynthesis
pfer00071  Fatty acid degradation
pfer00074  Mycolic acid biosynthesis
pfer00130  Ubiquinone and other terpenoid-quinone biosynthesis
pfer00190  Oxidative phosphorylation
pfer00220  Arginine biosynthesis
pfer00230  Purine metabolism
pfer00240  Pyrimidine metabolism
pfer00250  Alanine, aspartate and glutamate metabolism
pfer00260  Glycine, serine and threonine metabolism
pfer00261  Monobactam biosynthesis
pfer00270  Cysteine and methionine metabolism
pfer00280  Valine, leucine and isoleucine degradation
pfer00290  Valine, leucine and isoleucine biosynthesis
pfer00300  Lysine biosynthesis
pfer00310  Lysine degradation
pfer00311  Penicillin and cephalosporin biosynthesis
pfer00330  Arginine and proline metabolism
pfer00340  Histidine metabolism
pfer00350  Tyrosine metabolism
pfer00360  Phenylalanine metabolism
pfer00361  Chlorocyclohexane and chlorobenzene degradation
pfer00362  Benzoate degradation
pfer00364  Fluorobenzoate degradation
pfer00380  Tryptophan metabolism
pfer00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pfer00401  Novobiocin biosynthesis
pfer00410  beta-Alanine metabolism
pfer00430  Taurine and hypotaurine metabolism
pfer00440  Phosphonate and phosphinate metabolism
pfer00450  Selenocompound metabolism
pfer00460  Cyanoamino acid metabolism
pfer00470  D-Amino acid metabolism
pfer00480  Glutathione metabolism
pfer00500  Starch and sucrose metabolism
pfer00511  Other glycan degradation
pfer00520  Amino sugar and nucleotide sugar metabolism
pfer00521  Streptomycin biosynthesis
pfer00523  Polyketide sugar unit biosynthesis
pfer00525  Acarbose and validamycin biosynthesis
pfer00540  Lipopolysaccharide biosynthesis
pfer00541  O-Antigen nucleotide sugar biosynthesis
pfer00542  O-Antigen repeat unit biosynthesis
pfer00543  Exopolysaccharide biosynthesis
pfer00550  Peptidoglycan biosynthesis
pfer00552  Teichoic acid biosynthesis
pfer00561  Glycerolipid metabolism
pfer00562  Inositol phosphate metabolism
pfer00564  Glycerophospholipid metabolism
pfer00572  Arabinogalactan biosynthesis - Mycobacterium
pfer00592  alpha-Linolenic acid metabolism
pfer00600  Sphingolipid metabolism
pfer00620  Pyruvate metabolism
pfer00623  Toluene degradation
pfer00627  Aminobenzoate degradation
pfer00630  Glyoxylate and dicarboxylate metabolism
pfer00633  Nitrotoluene degradation
pfer00640  Propanoate metabolism
pfer00643  Styrene degradation
pfer00650  Butanoate metabolism
pfer00660  C5-Branched dibasic acid metabolism
pfer00670  One carbon pool by folate
pfer00680  Methane metabolism
pfer00710  Carbon fixation by Calvin cycle
pfer00720  Other carbon fixation pathways
pfer00730  Thiamine metabolism
pfer00740  Riboflavin metabolism
pfer00750  Vitamin B6 metabolism
pfer00760  Nicotinate and nicotinamide metabolism
pfer00770  Pantothenate and CoA biosynthesis
pfer00780  Biotin metabolism
pfer00785  Lipoic acid metabolism
pfer00790  Folate biosynthesis
pfer00791  Atrazine degradation
pfer00860  Porphyrin metabolism
pfer00900  Terpenoid backbone biosynthesis
pfer00903  Limonene degradation
pfer00906  Carotenoid biosynthesis
pfer00907  Pinene, camphor and geraniol degradation
pfer00909  Sesquiterpenoid and triterpenoid biosynthesis
pfer00910  Nitrogen metabolism
pfer00920  Sulfur metabolism
pfer00930  Caprolactam degradation
pfer00946  Degradation of flavonoids
pfer00999  Biosynthesis of various plant secondary metabolites
pfer01040  Biosynthesis of unsaturated fatty acids
pfer01059  Biosynthesis of enediyne antibiotics
KO pathway
ko01100   
LinkDB

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