KEGG   PATHWAY: ppav04122
Entry
ppav04122                   Pathway                                
Name
Sulfur relay system - Pectobacterium parvum
Description
Ubiquitin and ubiquitin-like proteins (Ubls) are signalling messengers that control many cellular functions, such as cell proliferation, apoptosis, and DNA repair. It is suggested that Ub-protein modification evolved from prokaryotic sulfurtransfer systems. Molybdenum cofactor (Moco) and thiamin are sulfur-containing cofactors whose biosynthesis includes a key sulfur transfer step that uses unique sulfur carrier proteins, MoaD and ThiS. Ubiquitin, MoaD, and ThiS are all structurally related proteins whose C-termini are activated through adenylation by homologous E1-like enzymes. s2T biosynthesis may share similar chemistry with Moco and thiamin synthesis. In Saccharomyces cerevisiae, Urm1 and Uba4 function as part of a ubl protein conjugation system, though they have sequence homology to bacterial sulfur-transfer enzymes and the ability to function in sulfur transfer.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
ppav04122  Sulfur relay system
ppav04122

Organism
Pectobacterium parvum [GN:ppav]
Gene
LOZ86_15170  IscS subfamily cysteine desulfurase [KO:K04487] [EC:2.8.1.7]
LOZ86_15120  sseA; 3-mercaptopyruvate sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
LOZ86_00420  tusA; sulfurtransferase TusA [KO:K04085] [EC:2.8.1.-]
LOZ86_03205  tusB; sulfurtransferase complex subunit TusB [KO:K07237]
LOZ86_03200  tusC; sulfurtransferase complex subunit TusC [KO:K07236]
LOZ86_03195  tusD; sulfurtransferase complex subunit TusD [KO:K07235] [EC:2.8.1.-]
LOZ86_08885  tusE; sulfurtransferase TusE [KO:K11179] [EC:2.8.1.-]
LOZ86_10500  mnmA; tRNA 2-thiouridine(34) synthase MnmA [KO:K00566] [EC:2.8.1.13]
LOZ86_13865  moaE; molybdopterin synthase catalytic subunit MoaE [KO:K03635] [EC:2.8.1.12]
LOZ86_13885  moaA; GTP 3',8-cyclase MoaA [KO:K03639] [EC:4.1.99.22]
LOZ86_13870  moaD; molybdopterin synthase sulfur carrier subunit [KO:K03636]
LOZ86_08450  moeB; molybdopterin-synthase adenylyltransferase MoeB [KO:K21029] [EC:2.7.7.80]
LOZ86_13875  moaC; cyclic pyranopterin monophosphate synthase MoaC [KO:K03637] [EC:4.6.1.17]
LOZ86_18495  mog; molybdopterin adenylyltransferase [KO:K03831] [EC:2.7.7.75]
LOZ86_13880  moaB; molybdenum cofactor biosynthesis protein B [KO:K03638] [EC:2.7.7.75]
LOZ86_15670  thiI; tRNA 4-thiouridine(8) synthase ThiI [KO:K03151] [EC:2.8.1.4]
LOZ86_02020  thiS; sulfur carrier protein ThiS [KO:K03154]
LOZ86_02025  HesA/MoeB/ThiF family protein [KO:K03148] [EC:2.7.7.73]
Compound
C00019  S-Adenosyl-L-methionine
C00041  L-Alanine
C00044  GTP
C00097  L-Cysteine
C00378  Thiamine
C00868  tRNA uridine
C00979  O-Acetyl-L-serine
C05924  Molybdopterin
C17322  tRNA containing 2-thiouridine
C18237  Molybdoenzyme molybdenum cofactor
C18239  Precursor Z
Reference
  Authors
Noma A, Sakaguchi Y, Suzuki T
  Title
Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions.
  Journal
Nucleic Acids Res 37:1335-52 (2009)
DOI:10.1093/nar/gkn1023
Reference
  Authors
Iyer LM, Burroughs AM, Aravind L
  Title
The prokaryotic antecedents of the ubiquitin-signaling system and the early evolution of ubiquitin-like beta-grasp domains.
  Journal
Genome Biol 7:R60 (2006)
DOI:10.1186/gb-2006-7-7-r60
Reference
  Authors
Schwarz G, Mendel RR, Ribbe MW
  Title
Molybdenum cofactors, enzymes and pathways.
  Journal
Nature 460:839-47 (2009)
DOI:10.1038/nature08302
Related
pathway
ppav00270  Cysteine and methionine metabolism
ppav00730  Thiamine metabolism
ppav00790  Folate biosynthesis
KO pathway
ko04122   
LinkDB

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