Entry
Name
ABC transporters - Pseudomonas putida NBRC 14164
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Pseudomonas putida NBRC 14164 [GN:
ppun ]
Gene
PP4_14620 sbp; sulfate ABC transporter substrate-binding protein [KO:K02048 ]
PP4_52430 cysP; sulfate ABC transporter substrate-binding protein CysP [KO:K23163 ]
PP4_02520 tauA; taurine ABC transporter substrate-binding protein [KO:K15551 ]
PP4_02260 atsR; sulfate ester ABC transporter substrate-binding protein [KO:K15553 ]
PP4_02560 ssuA; aliphatic sulfonate ABC transporter substrate-binding protein [KO:K15553 ]
PP4_27970 ssuA; aliphatic sulfonate ABC transporter substrate-binding protein [KO:K15553 ]
PP4_02580 ssuC; aliphatic sulfonate ABC transporter permease protein [KO:K15554 ]
PP4_18540 modA; molybdate ABC transporter substrate-binding protein [KO:K02020 ]
PP4_49510 putative iron ABC transporter substrate-binding protein [KO:K02012 ]
PP4_52680 putative iron ABC transporter substrate-binding protein [KO:K02012 ]
PP4_52520 spuE; polyamine ABC transporter substrate-binding protein SpuE [KO:K11073 ]
PP4_52530 spuD; polyamine ABC transporter substrate-binding protein SpuD [KO:K11073 ]
PP4_54020 putative putrescine ABC transporter substrate-binding protein [KO:K11073 ]
PP4_43980 putative polyamine ABC transporter substrate-binding protein [KO:K11073 ]
PP4_25190 putative polyamine ABC transporter substrate-binding protein [KO:K11073 ]
PP4_36210 putative polyamine ABC transporter substrate-binding protein [KO:K11073 ]
PP4_21040 putative polyamine ABC transporter substrate-binding protein [KO:K11073 ]
PP4_52490 spuH; polyamine ABC transporter permease protein SpuH [KO:K11074 ]
PP4_52500 spuG; polyamine ABC transporter permease protein SpuG [KO:K11075 ]
PP4_00690 putative amino acid ABC transporter substrate-binding protein [KO:K02002 ]
PP4_03220 putative glycine betaine/L-proline ABC transporter substrate-binding protein [KO:K02002 ]
PP4_03320 putative glycine betaine/L-proline ABC transporter substrate-binding protein [KO:K02002 ]
PP4_25340 proX; glycine betaine/L-proline ABC transporter substrate-binding protein [KO:K02002 ]
PP4_40350 putative glycine betaine ABC transporter substrate-binding protein [KO:K02002 ]
PP4_22730 putative amino acid ABC transporter substrate-binding protein [KO:K02002 ]
PP4_03210 putative glycine betaine/L-proline ABC transporter permease protein [KO:K02001 ]
PP4_25330 proW; glycine betaine/L-proline ABC transporter permease protein [KO:K02001 ]
PP4_44030 putative osmoprotectant ABC transporter substrate-binding protein [KO:K05845 ]
PP4_44020 putative osmoprotectant ABC transporter permease protein [KO:K05846 ]
PP4_44040 putative osmoprotectant ABC transporter permease protein [KO:K05846 ]
PP4_42990 gtsD; putative sugar ABC transporter ATP-binding subunit GtsD [KO:K10112 ] [EC:7.5.2.-]
PP4_21530 sugar ABC transporter ATP-binding protein [KO:K10548 ] [EC:7.5.2.-]
PP4_43480 ttg2C; toluene tolerance ABC transporter substrate-binding protein [KO:K02067 ]
PP4_43490 ttg2B; toluene tolerance ABC transporter permease protein [KO:K02066 ]
PP4_43500 ttg2A; toluene tolerance ABC transporter ATP-binding protein [KO:K02065 ]
PP4_43020 gtsA; putative sugar ABC transporter substrate-binding protein GtsA [KO:K17315 ]
PP4_43010 gtsB; putative sugar ABC transporter permease protein GtsB [KO:K17316 ]
PP4_43000 gtsC; putative sugar ABC transporter permease protein GtsC [KO:K17317 ]
PP4_19040 rbsB; ribose ABC transporter substrate-binding protein [KO:K10439 ]
PP4_53900 pstS; phosphate ABC transporter substrate-binding protein [KO:K02040 ]
PP4_31820 pstS; phosphate ABC transporter substrate-binding protein [KO:K02040 ]
PP4_53890 pstC; phosphate ABC transporter permease protein PtsC [KO:K02037 ]
PP4_31810 pstC; phosphate ABC transporter permease protein PstC [KO:K02037 ]
PP4_53880 pstA; phosphate ABC transporter permease protein PtsA [KO:K02038 ]
PP4_31800 pstA; phosphate ABC transporter permease protein PstA [KO:K02038 ]
PP4_44550 putative phosphonate ABC transporter substrate-binding protein [KO:K02044 ]
PP4_44520 putative phosphonate ABC transporter permease protein [KO:K02042 ]
PP4_44530 putative phosphonate ABC transporter permease protein [KO:K02042 ]
PP4_08090 aapJ; general L-amino acid ABC transporter substrate-binding protein [KO:K09969 ]
PP4_08100 aapQ; general L-amino acid ABC transporter permease protein AapQ [KO:K09970 ]
PP4_08110 aapM; general L-amino acid ABC transporter permease protein AapM [KO:K09971 ]
PP4_13340 aotJ; arginine/ornithine ABC transporter substrate-binding protein [KO:K10022 ]
PP4_13360 aotM; arginine/ornithine ABC transporter permease protein AotM [KO:K10023 ]
PP4_13350 aotQ; arginine/ornithine ABC transporter permease protein AotQ [KO:K10024 ]
PP4_49360 branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
PP4_20700 livK; leucine ABC transporter substrate-binding protein [KO:K01999 ]
PP4_10810 braC; branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
PP4_49350 branched-chain amino acid ABC transporter permease protein [KO:K01997 ]
PP4_10800 braD; branched-chain amino acid ABC transporter permease protein BraD [KO:K01997 ]
PP4_20720 putative branched-chain amino acid ABC transporter permease [KO:K01998 ]
PP4_49340 branched-chain amino acid ABC transporter permease protein [KO:K01998 ]
PP4_10790 braE; branched-chain amino acid ABC transporter permease protein BraE [KO:K01998 ]
PP4_49330 branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995 ]
PP4_20730 livG; branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995 ]
PP4_10780 braF; branched-chain amino acid ABC transporter ATP-binding protein BraF [KO:K01995 ]
PP4_20740 livF; putative branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
PP4_49320 branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
PP4_10770 braG; branched-chain amino acid ABC transporter ATP-binding protein BraG [KO:K01996 ]
PP4_02400 putative D-methionine ABC transporter substrate-binding protein [KO:K02073 ]
PP4_01040 putative D-methionine ABC transporter substrate-binding protein [KO:K02073 ]
PP4_02380 putative D-methionine ABC transporter permease protein [KO:K02072 ]
PP4_01050 putative D-methionine ABC transporter permease protein [KO:K02072 ]
PP4_02390 putative D-methionine ABC transporter ATP-binding protein [KO:K02071 ]
PP4_01060 putative D-methionine ABC transporter ATP-binding protein [KO:K02071 ]
PP4_43860 dppA; dipeptide ABC transporter substrate-binding protein [KO:K12368 ]
PP4_43870 dppA; dipeptide ABC transporter substrate-binding protein [KO:K12368 ]
PP4_43890 dppA; dipeptide ABC transporter substrate-binding protein [KO:K12368 ]
PP4_53470 putative dipeptide ABC transporter substrate-binding protein [KO:K12368 ]
PP4_43900 dppB; dipeptide ABC transporter permease protein DppB [KO:K12369 ]
PP4_43910 dppC; dipeptide ABC transporter permease protein DppC [KO:K12370 ]
PP4_43920 dppD; dipeptide ABC transporter ATP-binding protein DppD [KO:K12371 ]
PP4_43930 dppF; dipeptide ABC transporter ATP-binding protein DppF [KO:K12372 ]
PP4_16090 putative peptide ABC transporter substrate-binding protein [KO:K13893 ]
PP4_16100 putative peptide ABC transporter substrate-binding protein [KO:K13893 ]
PP4_24290 putative peptide ABC transporter substrate-binding protein [KO:K13893 ]
PP4_20050 putative metal ABC transporter substrate-binding protein [KO:K09815 ]
PP4_36920 lolE; lipoprotein-releasing ABC transporter permease protein LolE [KO:K09808 ]
PP4_36940 lolC; lipoprotein-releasing ABC transporter permease protein LolC [KO:K09808 ]
PP4_36930 lolD; lipoprotein-releasing ABC transporter ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
PP4_12790 putative ABC transporter ATP-binding/permease protein [KO:K18893 ]
PP4_32270 putative ABC transporter permease/ATP-binding protein [KO:K18893 ]
PP4_15490 pvdT; pyoverdine efflux pump ATP-binding protein PvdT [KO:K05685 ] [EC:7.6.2.-]
PP4_35780 putative ABC transporter permease/ATP-binding protein [KO:K02471 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
KO pathway
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