PATHWAY: psep02010 Help
Entry
Name
ABC transporters - Pseudomonas sessilinigenes
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Pseudomonas sessilinigenes [GN:
psep ]
Gene
C4K39_1431 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component [KO:K15553 ]
C4K39_5384 Molybdenum ABC transporter, substrate-binding protein ModA [KO:K02020 ]
C4K39_2233 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_2348 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_2665 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_2944 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_3516 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_3736 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_3737 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_5245 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_3015 Putrescine ABC transporter putrescine-binding protein PotF [KO:K11073 ]
C4K39_0032 Glycine betaine/L-proline transport substrate-binding protein ProX [KO:K02002 ]
C4K39_1782 Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline-binding/permease protein [KO:K02002 ]
C4K39_3903 Choline binding ABC transport system permease protein ChoW [KO:K02001 ]
C4K39_0880 L-proline glycine betaine ABC transport system permease protein ProW [KO:K05846 ]
C4K39_0882 Glycine betaine/carnitine/choline ABC transporter, permease protein [KO:K05846 ]
C4K39_3263 Glucose ABC transporter, ATP-binding subunit [KO:K10112 ] [EC:7.5.2.-]
C4K39_0939 Phospholipid ABC transporter substrate-binding protein MlaD [KO:K02067 ]
C4K39_3260 Glucose ABC transport system, periplasmic sugar-binding protein [KO:K17315 ]
C4K39_2147 Ribose ABC transport system, periplasmic ribose-binding protein RbsB [KO:K10439 ]
C4K39_3541 Phosphate ABC transporter, periplasmic phosphate-binding protein PstS [KO:K02040 ]
C4K39_1326 Lysine-arginine-ornithine-binding periplasmic protein ArgT [KO:K10014 ]
C4K39_5071 Lysine-arginine-ornithine-binding periplasmic protein ArgT [KO:K10014 ]
C4K39_4755 Glutamate Aspartate periplasmic binding protein precursor GltI [KO:K10001 ]
C4K39_4753 Glutamate Aspartate transport system permease protein GltK [KO:K10002 ]
C4K39_4754 Glutamate Aspartate transport system permease protein GltJ [KO:K10003 ]
C4K39_0259 L-cystine ABC transporter (wide substrate range), substrate-binding protein FliY [KO:K02424 ]
C4K39_3749 ABC-type amino acid transport/signal transduction system, periplasmic component/domain [KO:K02424 ]
C4K39_0258 L-cystine ABC transporter (wide substrate range), permease protein YecS [KO:K10009 ]
C4K39_5779 Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein [KO:K10022 ]
C4K39_1051 Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein [KO:K10022 ]
C4K39_3353 Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein [KO:K10022 ]
C4K39_3355 Arginine/ornithine ABC transporter, permease protein AotM [KO:K10023 ]
C4K39_3354 Arginine/ornithine ABC transporter, permease protein AotQ [KO:K10024 ]
C4K39_5507 High-affinity leucine-specific transport system, periplasmic binding protein LivK [KO:K01999 ]
C4K39_0591 Branched-chain amino acid ABC transporter, amino acid-binding protein [KO:K01999 ]
C4K39_1360 High-affinity leucine-specific transport system, periplasmic binding protein LivK [KO:K01999 ]
C4K39_0592 High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
C4K39_1359 High-affinity branched-chain amino acid transport system permease protein LivH [KO:K01997 ]
C4K39_0593 Branched-chain amino acid transport system permease protein LivM [KO:K01998 ]
C4K39_1358 Branched-chain amino acid transport system permease protein LivM [KO:K01998 ]
C4K39_0594 Branched-chain amino acid transport ATP-binding protein LivG [KO:K01995 ]
C4K39_1357 Branched-chain amino acid transport ATP-binding protein LivG [KO:K01995 ]
C4K39_0595 Branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
C4K39_1356 Branched-chain amino acid transport ATP-binding protein LivF [KO:K01996 ]
C4K39_0889 Dipeptide-binding ABC transporter, periplasmic substrate-binding component [KO:K12368 ]
C4K39_0891 Dipeptide-binding ABC transporter, periplasmic substrate-binding component [KO:K12368 ]
C4K39_0892 Dipeptide-binding ABC transporter, periplasmic substrate-binding component [KO:K12368 ]
C4K39_5546 ABC transporter, periplasmic substrate-binding protein yejA [KO:K13893 ]
C4K39_5638 ABC transporter, periplasmic substrate-binding protein yejA [KO:K13893 ]
C4K39_6093 Cation ABC transporter, periplasmic cation-binding protein [KO:K09815 ]
C4K39_2065 Lipoprotein-releasing system ATP-binding protein LolD [KO:K09810 ] [EC:7.6.2.-]
C4K39_1752 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE [KO:K02195 ]
C4K39_5488 ABC efflux pump, fused inner membrane - ATPase subunit [KO:K14698 ] [EC:7.-.-.-]
C4K39_2262 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 1 [KO:K14698 ] [EC:7.-.-.-]
C4K39_5487 ABC efflux pump, fused inner membrane - ATPase subunit [KO:K14699 ] [EC:7.-.-.-]
C4K39_2263 Heterodimeric efflux ABC transporter, permease/ATP-binding subunit 2 [KO:K14699 ] [EC:7.-.-.-]
C4K39_2961 Type I secretion system ATPase, ATP-binding component PrtD/AprD [KO:K12536 ]
C4K39_4274 Type I secretion system ATPase, ATP-binding component HasD [KO:K12536 ]
C4K39_6014 Macrolide export ATP-binding/permease protein MacB [KO:K05685 ] [EC:7.6.2.-]
C4K39_2187 Macrolide export ATP-binding/permease protein MacB [KO:K05685 ] [EC:7.6.2.-]
C4K39_4963 Macrolide export ATP-binding/permease protein MacB [KO:K05685 ] [EC:7.6.2.-]
C4K39_6023 PvdE, pyoverdine ABC export system, fused ATPase-permease component [KO:K06160 ]
C4K39_4958 ABC-type siderophore export system, fused ATPase-permease component [KO:K06161 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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