PATHWAY: pva01100 Help Entry pva01100                    Pathway                                 Name Metabolic pathways - Pantoea vagans C9-1 Class BRITE hierarchy Pathway map pva01100   Metabolic pathways Module pva_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:pva01100] pva_M00002   Glycolysis, core module involving three-carbon compounds [PATH:pva01100] pva_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pva01100] pva_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pva01100] pva_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:pva01100] pva_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pva01100] pva_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pva01100] pva_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:pva01100] pva_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pva01100] pva_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pva01100] pva_M00012   Glyoxylate cycle [PATH:pva01100] pva_M00015   Proline biosynthesis, glutamate => proline [PATH:pva01100] pva_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pva01100] pva_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:pva01100] pva_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pva01100] pva_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pva01100] pva_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:pva01100] pva_M00021   Cysteine biosynthesis, serine => cysteine [PATH:pva01100] pva_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pva01100] pva_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:pva01100] pva_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pva01100] pva_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:pva01100] pva_M00026   Histidine biosynthesis, PRPP => histidine [PATH:pva01100] pva_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:pva01100] pva_M00034   Methionine salvage pathway [PATH:pva01100] pva_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pva01100] pva_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pva01100] pva_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pva01100] pva_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pva01100] pva_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:pva01100] pva_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pva01100] pva_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pva01100] pva_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:pva01100] pva_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:pva01100] pva_M00063   CMP-KDO biosynthesis [PATH:pva01100] pva_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:pva01100] pva_M00082   Fatty acid biosynthesis, initiation [PATH:pva01100] pva_M00083   Fatty acid biosynthesis, elongation [PATH:pva01100] pva_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:pva01100] pva_M00087   beta-Oxidation [PATH:pva01100] pva_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pva01100] pva_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pva01100] pva_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pva01100] pva_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pva01100] pva_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:pva01100] pva_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pva01100] pva_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:pva01100] pva_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pva01100] pva_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pva01100] pva_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pva01100] pva_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pva01100] pva_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:pva01100] pva_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:pva01100] pva_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:pva01100] pva_M00149   Succinate dehydrogenase, prokaryotes [PATH:pva01100] pva_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:pva01100] pva_M00168   CAM (Crassulacean acid metabolism), dark [PATH:pva01100] pva_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:pva01100] pva_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pva01100] pva_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:pva01100] pva_M00417   Cytochrome o ubiquinol oxidase [PATH:pva01100] pva_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pva01100] pva_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pva01100] pva_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:pva01100] pva_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pva01100] pva_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:pva01100] pva_M00555   Betaine biosynthesis, choline => betaine [PATH:pva01100] pva_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:pva01100] pva_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pva01100] pva_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pva01100] pva_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:pva01100] pva_M00621   Glycine cleavage system [PATH:pva01100] pva_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:pva01100] pva_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:pva01100] pva_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pva01100] pva_M00793   dTDP-L-rhamnose biosynthesis [PATH:pva01100] pva_M00844   Arginine biosynthesis, ornithine => arginine [PATH:pva01100] pva_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pva01100] pva_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:pva01100] pva_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:pva01100] pva_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:pva01100] pva_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pva01100] pva_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pva01100] pva_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:pva01100] pva_M00904   Dapdiamides biosynthesis, L-2,3-diaminopropanoate => dapdiamide A/B/C [PATH:pva01100] pva_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pva01100] pva_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pva01100] pva_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:pva01100] pva_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:pva01100] pva_M00970   Proline degradation, proline => glutamate [PATH:pva01100] Organism Pantoea vagans C9-1 [GN:pva] Related pathway pva00010   Glycolysis / Gluconeogenesis pva00020   Citrate cycle (TCA cycle) pva00030   Pentose phosphate pathway pva00040   Pentose and glucuronate interconversions pva00051   Fructose and mannose metabolism pva00052   Galactose metabolism pva00053   Ascorbate and aldarate metabolism pva00061   Fatty acid biosynthesis pva00071   Fatty acid degradation pva00130   Ubiquinone and other terpenoid-quinone biosynthesis pva00190   Oxidative phosphorylation pva00220   Arginine biosynthesis pva00230   Purine metabolism pva00240   Pyrimidine metabolism pva00250   Alanine, aspartate and glutamate metabolism pva00260   Glycine, serine and threonine metabolism pva00261   Monobactam biosynthesis pva00270   Cysteine and methionine metabolism pva00280   Valine, leucine and isoleucine degradation pva00290   Valine, leucine and isoleucine biosynthesis pva00300   Lysine biosynthesis pva00310   Lysine degradation pva00330   Arginine and proline metabolism pva00332   Carbapenem biosynthesis pva00340   Histidine metabolism pva00350   Tyrosine metabolism pva00360   Phenylalanine metabolism pva00361   Chlorocyclohexane and chlorobenzene degradation pva00362   Benzoate degradation pva00364   Fluorobenzoate degradation pva00380   Tryptophan metabolism pva00400   Phenylalanine, tyrosine and tryptophan biosynthesis pva00401   Novobiocin biosynthesis pva00410   beta-Alanine metabolism pva00430   Taurine and hypotaurine metabolism pva00440   Phosphonate and phosphinate metabolism pva00450   Selenocompound metabolism pva00460   Cyanoamino acid metabolism pva00470   D-Amino acid metabolism pva00480   Glutathione metabolism pva00500   Starch and sucrose metabolism pva00511   Other glycan degradation pva00520   Amino sugar and nucleotide sugar metabolism pva00521   Streptomycin biosynthesis pva00523   Polyketide sugar unit biosynthesis pva00525   Acarbose and validamycin biosynthesis pva00540   Lipopolysaccharide biosynthesis pva00541   O-Antigen nucleotide sugar biosynthesis pva00542   O-Antigen repeat unit biosynthesis pva00543   Exopolysaccharide biosynthesis pva00550   Peptidoglycan biosynthesis pva00552   Teichoic acid biosynthesis pva00561   Glycerolipid metabolism pva00562   Inositol phosphate metabolism pva00564   Glycerophospholipid metabolism pva00565   Ether lipid metabolism pva00592   alpha-Linolenic acid metabolism pva00600   Sphingolipid metabolism pva00620   Pyruvate metabolism pva00623   Toluene degradation pva00625   Chloroalkane and chloroalkene degradation pva00626   Naphthalene degradation pva00627   Aminobenzoate degradation pva00630   Glyoxylate and dicarboxylate metabolism pva00633   Nitrotoluene degradation pva00640   Propanoate metabolism pva00643   Styrene degradation pva00650   Butanoate metabolism pva00660   C5-Branched dibasic acid metabolism pva00670   One carbon pool by folate pva00680   Methane metabolism pva00710   Carbon fixation by Calvin cycle pva00720   Other carbon fixation pathways pva00730   Thiamine metabolism pva00740   Riboflavin metabolism pva00750   Vitamin B6 metabolism pva00760   Nicotinate and nicotinamide metabolism pva00770   Pantothenate and CoA biosynthesis pva00780   Biotin metabolism pva00785   Lipoic acid metabolism pva00790   Folate biosynthesis pva00791   Atrazine degradation pva00860   Porphyrin metabolism pva00900   Terpenoid backbone biosynthesis pva00906   Carotenoid biosynthesis pva00907   Pinene, camphor and geraniol degradation pva00910   Nitrogen metabolism pva00920   Sulfur metabolism pva00930   Caprolactam degradation pva00946   Degradation of flavonoids pva00998   Biosynthesis of various antibiotics pva00999   Biosynthesis of various plant secondary metabolites pva01040   Biosynthesis of unsaturated fatty acids pva01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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