KEGG   PATHWAY: rcn00195
Entry
rcn00195                    Pathway                                
Name
Photosynthesis - Rosa chinensis (China rose)
Description
Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
Class
Metabolism; Energy metabolism
Pathway map
rcn00195  Photosynthesis
rcn00195

Organism
Rosa chinensis (China rose) [GN:rcn]
Gene
112188393  oxygen-evolving enhancer protein 1, chloroplastic [KO:K02716]
112182614  psbP-like protein 1, chloroplastic [KO:K02717]
112183296  oxygen-evolving enhancer protein 2, chloroplastic [KO:K02717]
112197524  photosynthetic NDH subunit of lumenal location 3, chloroplastic isoform X1 [KO:K08901]
112167033  photosynthetic NDH subunit of lumenal location 3, chloroplastic [KO:K08901]
112196499  photosynthetic NDH subunit of lumenal location 2, chloroplastic [KO:K08901]
112201705  oxygen-evolving enhancer protein 3-2, chloroplastic [KO:K08901]
112165793  photosystem II 10 kDa polypeptide, chloroplastic [KO:K03541]
112173878  photosystem II 22 kDa protein, chloroplastic [KO:K03542]
112170093  photosystem II reaction center W protein, chloroplastic [KO:K02721]
112201107  photosystem II core complex proteins psbY, chloroplastic [KO:K02723]
112188784  LOW QUALITY PROTEIN: photosystem II repair protein PSB27-H1, chloroplastic [KO:K08902]
112174200  photosystem II reaction center PSB28 protein, chloroplastic [KO:K08903]
112200996  photosystem I reaction center subunit II, chloroplastic [KO:K02692]
112168884  photosystem I reaction center subunit IV B, chloroplastic [KO:K02693]
112168089  photosystem I reaction center subunit III, chloroplastic [KO:K02694]
112165518  photosystem I reaction center subunit V, chloroplastic [KO:K08905]
112190599  photosystem I reaction center subunit VI, chloroplastic [KO:K02695]
112166140  photosystem I reaction center subunit psaK, chloroplastic [KO:K02698]
112191342  photosystem I reaction center subunit XI, chloroplastic [KO:K02699]
112187319  photosystem I reaction center subunit N, chloroplastic [KO:K02701]
112166100  photosystem I subunit O [KO:K14332]
112183729  cytochrome b6-f complex iron-sulfur subunit, chloroplastic [KO:K02636] [EC:7.1.1.6]
112173884  plastocyanin [KO:K02638]
112173006  ferredoxin, root R-B1 [KO:K02639]
112178773  ferredoxin-1 [KO:K02639]
112175351  ferredoxin C 2, chloroplastic [KO:K02639]
112166211  ferredoxin, root R-B1 [KO:K02639]
112201167  ferredoxin C 1, chloroplastic [KO:K02639]
112165930  ferredoxin--NADP reductase, root isozyme, chloroplastic [KO:K02641] [EC:1.18.1.2]
112183349  ferredoxin--NADP reductase, leaf isozyme, chloroplastic isoform X3 [KO:K02641] [EC:1.18.1.2]
112166383  cytochrome c6, chloroplastic isoform X1 [KO:K08906]
112166263  ATP synthase gamma chain, chloroplastic [KO:K02115]
112164845  ATP synthase gamma chain, chloroplastic [KO:K02115]
112182095  ATP synthase subunit delta [KO:K02113]
112172541  ATP synthase subunit delta, chloroplastic [KO:K02113]
112172215  ATP synthase subunit b', chloroplastic [KO:K02109]
Compound
C00001  H2O
C00002  ATP
C00005  NADPH
C00006  NADP+
C00007  Oxygen
C00008  ADP
C00009  Orthophosphate
C00034  Manganese
C00080  H+
C02061  Plastoquinone
C16693  Plastoquinol
Reference
PMID:14764885
  Authors
Ferreira KN, Iverson TM, Maghlaoui K, Barber J, Iwata S.
  Title
Architecture of the photosynthetic oxygen-evolving center.
  Journal
Science 303:1831-8 (2004)
DOI:10.1126/science.1093087
Reference
PMID:12518057
  Authors
Kamiya N, Shen JR.
  Title
Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-A resolution.
  Journal
Proc Natl Acad Sci U S A 100:98-103 (2003)
DOI:10.1073/pnas.0135651100
Reference
PMID:11217865
  Authors
Zouni A, Witt HT, Kern J, Fromme P, Krauss N, Saenger W, Orth P.
  Title
Crystal structure of photosystem II from Synechococcus elongatus at 3.8 A resolution.
  Journal
Nature 409:739-743 (2001)
DOI:10.1038/35055589
Reference
PMID:11418848
  Authors
Jordan P, Fromme P, Witt HT, Klukas O, Saenger W, Krauss N.
  Title
Three-dimensional structure of cyanobacterial photosystem I at 2.5 A resolution.
  Journal
Nature 411:909-917 (2001)
DOI:10.1038/35082000
Reference
PMID:11369223
  Authors
Jones MR, Fyfe PK.
  Title
Photosynthesis: new light on biological oxygen production.
  Journal
Curr Biol 17:R318-R321 (2001)
DOI:10.1016/S0960-9822(01)00174-9
Reference
PMID:11914373
  Authors
Shen G, Zhao J, Reimer SK, Antonkine ML, Cai Q, Weiland SM, Golbeck JH, Bryant DA.
  Title
Assembly of photosystem I. I. Inactivation of the rubA gene encoding a membrane-associated rubredoxin in the cyanobacterium Synechococcus sp. PCC 7002 causes a loss of photosystem I activity.
  Journal
J Biol Chem 277:20343-54 (2002)
DOI:10.1074/jbc.M201103200
Related
pathway
rcn00196  Photosynthesis - antenna proteins
rcn00710  Carbon fixation by Calvin cycle
KO pathway
ko00195   
LinkDB

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