Entry
Name
ABC transporters - Rhizobium etli bv. mimosae IE4771
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
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Pathway map
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Organism
Rhizobium etli bv. mimosae IE4771 [GN:
rei ]
Gene
IE4771_CH02479 sulfate transporter/antisigma-factor antagonist domain-containing protein [KO:K02066 ]
IE4771_CH03645 ugpB-2; sn-glycerol 3-phosphate ABC transporter substrate-binding protein UgpB 2 [KO:K05813 ]
IE4771_CH02832 ugpB-1; sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB 1 [KO:K05813 ]
IE4771_CH02092 bztA; glutamate/glutamine/aspartate/asparagine ABC transporter substrate-binding protein BztA [KO:K09969 ]
IE4771_CH02011 aapJ; general L-amino acid ABC transporter substrate-binding protein AapJ [KO:K09969 ]
IE4771_CH02093 bztB; glutamate/glutamine/aspartate/asparagine ABC transporter permease protein BztB [KO:K09970 ]
IE4771_CH02094 bztC; glutamate/glutamine/aspartate/asparagine ABC transporter permease protein BztC [KO:K09971 ]
IE4771_PA00060 high-affinity branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
IE4771_CH03713 high-affinity branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
IE4771_CH03592 high-affinity branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
IE4771_PC00222 high-affinity branched-chain amino acid ABC transporter substrate-binding protein [KO:K01999 ]
IE4771_CH03597 livH-1; high-affinity branched-chain amino acid ABC transporter permease protein LivH 1 [KO:K01997 ]
IE4771_PC00225 livH-2; high-affinity branched-chain amino acid ABC transporter permease protein LivH 2 [KO:K01997 ]
IE4771_CH03596 livM-1; high-affinity branched-chain amino acid ABC transporter permease protein LivM 1 [KO:K01998 ]
IE4771_PC00226 livM-2; high-affinity branched-chain amino acid ABC transporter permease protein LivM 2 [KO:K01998 ]
IE4771_PA00059 high-affinity branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995 ]
IE4771_CH03716 high-affinity branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995 ]
IE4771_CH03595 livG-1; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 1 [KO:K01995 ]
IE4771_PC00223 livG-2; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG 2 [KO:K01995 ]
IE4771_PB00094 high-affinity branched-chain amino acid ABC transporter ATP-binding protein [KO:K01995 ]
IE4771_CH03594 livF-1; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 1 [KO:K01996 ]
IE4771_CH03717 high-affinity branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
IE4771_PA00058 high-affinity branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
IE4771_PC00224 livF-2; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 2 [KO:K01996 ]
IE4771_CH02348 high-affinity branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
IE4771_PB00093 high-affinity branched-chain amino acid ABC transporter ATP-binding protein [KO:K01996 ]
IE4771_PD00526 fhuD; iron(3+)-hydroxamate ABC transporter substrate-binding protein FhuD [KO:K23227 ]
IE4771_CH01097 prtD-2; protease secretion system ABC transporter ATP-binding protein PrtD 2 [KO:K12536 ]
IE4771_CH03497 prtD-3; protease secretion system ABC transporter ATP-binding protein PrtD 3 [KO:K12536 ]
IE4771_CH00370 prtD-1; protease secretion system ABC transporter ATP-binding protein PrtD 1 [KO:K12536 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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