KEGG   PATHWAY: rhf01100
Entry
rhf01100                    Pathway                                
Name
Metabolic pathways - Rhodoferax sediminis CHu59-6-5
Class
Pathway map
rhf01100  Metabolic pathways
rhf01100

Module
rhf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rhf01100]
rhf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rhf01100]
rhf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rhf01100]
rhf_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rhf01100]
rhf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rhf01100]
rhf_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rhf01100]
rhf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rhf01100]
rhf_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rhf01100]
rhf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rhf01100]
rhf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rhf01100]
rhf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rhf01100]
rhf_M00012  Glyoxylate cycle [PATH:rhf01100]
rhf_M00015  Proline biosynthesis, glutamate => proline [PATH:rhf01100]
rhf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rhf01100]
rhf_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rhf01100]
rhf_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rhf01100]
rhf_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rhf01100]
rhf_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rhf01100]
rhf_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rhf01100]
rhf_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rhf01100]
rhf_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:rhf01100]
rhf_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rhf01100]
rhf_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:rhf01100]
rhf_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:rhf01100]
rhf_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rhf01100]
rhf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rhf01100]
rhf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rhf01100]
rhf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rhf01100]
rhf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rhf01100]
rhf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rhf01100]
rhf_M00063  CMP-KDO biosynthesis [PATH:rhf01100]
rhf_M00082  Fatty acid biosynthesis, initiation [PATH:rhf01100]
rhf_M00083  Fatty acid biosynthesis, elongation [PATH:rhf01100]
rhf_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rhf01100]
rhf_M00087  beta-Oxidation [PATH:rhf01100]
rhf_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rhf01100]
rhf_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rhf01100]
rhf_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:rhf01100]
rhf_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rhf01100]
rhf_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rhf01100]
rhf_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rhf01100]
rhf_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rhf01100]
rhf_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rhf01100]
rhf_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:rhf01100]
rhf_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:rhf01100]
rhf_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rhf01100]
rhf_M00149  Succinate dehydrogenase, prokaryotes [PATH:rhf01100]
rhf_M00151  Cytochrome bc1 complex respiratory unit [PATH:rhf01100]
rhf_M00155  Cytochrome c oxidase, prokaryotes [PATH:rhf01100]
rhf_M00156  Cytochrome c oxidase, cbb3-type [PATH:rhf01100]
rhf_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rhf01100]
rhf_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rhf01100]
rhf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rhf01100]
rhf_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rhf01100]
rhf_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:rhf01100]
rhf_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:rhf01100]
rhf_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rhf01100]
rhf_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rhf01100]
rhf_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:rhf01100]
rhf_M00793  dTDP-L-rhamnose biosynthesis [PATH:rhf01100]
rhf_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rhf01100]
rhf_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rhf01100]
rhf_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rhf01100]
rhf_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rhf01100]
rhf_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rhf01100]
rhf_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rhf01100]
rhf_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rhf01100]
rhf_M00970  Proline degradation, proline => glutamate [PATH:rhf01100]
Organism
Rhodoferax sediminis CHu59-6-5 [GN:rhf]
Related
pathway
rhf00010  Glycolysis / Gluconeogenesis
rhf00020  Citrate cycle (TCA cycle)
rhf00030  Pentose phosphate pathway
rhf00040  Pentose and glucuronate interconversions
rhf00051  Fructose and mannose metabolism
rhf00052  Galactose metabolism
rhf00053  Ascorbate and aldarate metabolism
rhf00061  Fatty acid biosynthesis
rhf00071  Fatty acid degradation
rhf00130  Ubiquinone and other terpenoid-quinone biosynthesis
rhf00190  Oxidative phosphorylation
rhf00220  Arginine biosynthesis
rhf00230  Purine metabolism
rhf00240  Pyrimidine metabolism
rhf00250  Alanine, aspartate and glutamate metabolism
rhf00260  Glycine, serine and threonine metabolism
rhf00261  Monobactam biosynthesis
rhf00270  Cysteine and methionine metabolism
rhf00280  Valine, leucine and isoleucine degradation
rhf00290  Valine, leucine and isoleucine biosynthesis
rhf00300  Lysine biosynthesis
rhf00310  Lysine degradation
rhf00330  Arginine and proline metabolism
rhf00332  Carbapenem biosynthesis
rhf00340  Histidine metabolism
rhf00350  Tyrosine metabolism
rhf00360  Phenylalanine metabolism
rhf00361  Chlorocyclohexane and chlorobenzene degradation
rhf00362  Benzoate degradation
rhf00364  Fluorobenzoate degradation
rhf00380  Tryptophan metabolism
rhf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rhf00401  Novobiocin biosynthesis
rhf00405  Phenazine biosynthesis
rhf00410  beta-Alanine metabolism
rhf00430  Taurine and hypotaurine metabolism
rhf00450  Selenocompound metabolism
rhf00460  Cyanoamino acid metabolism
rhf00470  D-Amino acid metabolism
rhf00480  Glutathione metabolism
rhf00500  Starch and sucrose metabolism
rhf00520  Amino sugar and nucleotide sugar metabolism
rhf00521  Streptomycin biosynthesis
rhf00523  Polyketide sugar unit biosynthesis
rhf00525  Acarbose and validamycin biosynthesis
rhf00540  Lipopolysaccharide biosynthesis
rhf00541  O-Antigen nucleotide sugar biosynthesis
rhf00543  Exopolysaccharide biosynthesis
rhf00550  Peptidoglycan biosynthesis
rhf00552  Teichoic acid biosynthesis
rhf00561  Glycerolipid metabolism
rhf00562  Inositol phosphate metabolism
rhf00564  Glycerophospholipid metabolism
rhf00592  alpha-Linolenic acid metabolism
rhf00620  Pyruvate metabolism
rhf00623  Toluene degradation
rhf00625  Chloroalkane and chloroalkene degradation
rhf00626  Naphthalene degradation
rhf00627  Aminobenzoate degradation
rhf00630  Glyoxylate and dicarboxylate metabolism
rhf00633  Nitrotoluene degradation
rhf00640  Propanoate metabolism
rhf00643  Styrene degradation
rhf00650  Butanoate metabolism
rhf00660  C5-Branched dibasic acid metabolism
rhf00670  One carbon pool by folate
rhf00680  Methane metabolism
rhf00710  Carbon fixation by Calvin cycle
rhf00720  Other carbon fixation pathways
rhf00730  Thiamine metabolism
rhf00740  Riboflavin metabolism
rhf00750  Vitamin B6 metabolism
rhf00760  Nicotinate and nicotinamide metabolism
rhf00770  Pantothenate and CoA biosynthesis
rhf00780  Biotin metabolism
rhf00785  Lipoic acid metabolism
rhf00790  Folate biosynthesis
rhf00860  Porphyrin metabolism
rhf00900  Terpenoid backbone biosynthesis
rhf00906  Carotenoid biosynthesis
rhf00907  Pinene, camphor and geraniol degradation
rhf00910  Nitrogen metabolism
rhf00920  Sulfur metabolism
rhf00930  Caprolactam degradation
rhf00999  Biosynthesis of various plant secondary metabolites
rhf01040  Biosynthesis of unsaturated fatty acids
rhf01059  Biosynthesis of enediyne antibiotics
KO pathway
ko01100   
LinkDB

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