PATHWAY: rko01100 Help Entry rko01100                    Pathway                                 Name Metabolic pathways - Rhodococcus koreensis Class BRITE hierarchy Pathway map rko01100   Metabolic pathways Module rko_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rko01100] rko_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rko01100] rko_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rko01100] rko_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rko01100] rko_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rko01100] rko_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rko01100] rko_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rko01100] rko_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rko01100] rko_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rko01100] rko_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rko01100] rko_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rko01100] rko_M00012   Glyoxylate cycle [PATH:rko01100] rko_M00015   Proline biosynthesis, glutamate => proline [PATH:rko01100] rko_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rko01100] rko_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rko01100] rko_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rko01100] rko_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rko01100] rko_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rko01100] rko_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:rko01100] rko_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rko01100] rko_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:rko01100] rko_M00035   Methionine degradation [PATH:rko01100] rko_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rko01100] rko_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rko01100] rko_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rko01100] rko_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rko01100] rko_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rko01100] rko_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rko01100] rko_M00082   Fatty acid biosynthesis, initiation [PATH:rko01100] rko_M00083   Fatty acid biosynthesis, elongation [PATH:rko01100] rko_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rko01100] rko_M00087   beta-Oxidation [PATH:rko01100] rko_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rko01100] rko_M00098   Acylglycerol degradation [PATH:rko01100] rko_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rko01100] rko_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rko01100] rko_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rko01100] rko_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rko01100] rko_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rko01100] rko_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rko01100] rko_M00149   Succinate dehydrogenase, prokaryotes [PATH:rko01100] rko_M00151   Cytochrome bc1 complex respiratory unit [PATH:rko01100] rko_M00155   Cytochrome c oxidase, prokaryotes [PATH:rko01100] rko_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rko01100] rko_M00168   CAM (Crassulacean acid metabolism), dark [PATH:rko01100] rko_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:rko01100] rko_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rko01100] rko_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:rko01100] rko_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:rko01100] rko_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rko01100] rko_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:rko01100] rko_M00546   Purine degradation, xanthine => urea [PATH:rko01100] rko_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rko01100] rko_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:rko01100] rko_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:rko01100] rko_M00555   Betaine biosynthesis, choline => betaine [PATH:rko01100] rko_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:rko01100] rko_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rko01100] rko_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rko01100] rko_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:rko01100] rko_M00621   Glycine cleavage system [PATH:rko01100] rko_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:rko01100] rko_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rko01100] rko_M00793   dTDP-L-rhamnose biosynthesis [PATH:rko01100] rko_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rko01100] rko_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:rko01100] rko_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rko01100] rko_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rko01100] rko_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rko01100] rko_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:rko01100] rko_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:rko01100] rko_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:rko01100] rko_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rko01100] rko_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rko01100] rko_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rko01100] rko_M00970   Proline degradation, proline => glutamate [PATH:rko01100] rko_M00972   Proline metabolism [PATH:rko01100] rko_M00978   Ornithine-ammonia cycle [PATH:rko01100] Organism Rhodococcus koreensis [GN:rko] Related pathway rko00010   Glycolysis / Gluconeogenesis rko00020   Citrate cycle (TCA cycle) rko00030   Pentose phosphate pathway rko00040   Pentose and glucuronate interconversions rko00051   Fructose and mannose metabolism rko00052   Galactose metabolism rko00053   Ascorbate and aldarate metabolism rko00061   Fatty acid biosynthesis rko00071   Fatty acid degradation rko00074   Mycolic acid biosynthesis rko00100   Steroid biosynthesis rko00121   Secondary bile acid biosynthesis rko00130   Ubiquinone and other terpenoid-quinone biosynthesis rko00190   Oxidative phosphorylation rko00220   Arginine biosynthesis rko00230   Purine metabolism rko00240   Pyrimidine metabolism rko00250   Alanine, aspartate and glutamate metabolism rko00260   Glycine, serine and threonine metabolism rko00261   Monobactam biosynthesis rko00270   Cysteine and methionine metabolism rko00280   Valine, leucine and isoleucine degradation rko00290   Valine, leucine and isoleucine biosynthesis rko00300   Lysine biosynthesis rko00310   Lysine degradation rko00311   Penicillin and cephalosporin biosynthesis rko00330   Arginine and proline metabolism rko00332   Carbapenem biosynthesis rko00340   Histidine metabolism rko00350   Tyrosine metabolism rko00360   Phenylalanine metabolism rko00361   Chlorocyclohexane and chlorobenzene degradation rko00362   Benzoate degradation rko00364   Fluorobenzoate degradation rko00380   Tryptophan metabolism rko00400   Phenylalanine, tyrosine and tryptophan biosynthesis rko00401   Novobiocin biosynthesis rko00410   beta-Alanine metabolism rko00430   Taurine and hypotaurine metabolism rko00450   Selenocompound metabolism rko00460   Cyanoamino acid metabolism rko00470   D-Amino acid metabolism rko00480   Glutathione metabolism rko00500   Starch and sucrose metabolism rko00514   Other types of O-glycan biosynthesis rko00515   Mannose type O-glycan biosynthesis rko00520   Amino sugar and nucleotide sugar metabolism rko00521   Streptomycin biosynthesis rko00523   Polyketide sugar unit biosynthesis rko00525   Acarbose and validamycin biosynthesis rko00540   Lipopolysaccharide biosynthesis rko00541   O-Antigen nucleotide sugar biosynthesis rko00542   O-Antigen repeat unit biosynthesis rko00543   Exopolysaccharide biosynthesis rko00550   Peptidoglycan biosynthesis rko00552   Teichoic acid biosynthesis rko00561   Glycerolipid metabolism rko00562   Inositol phosphate metabolism rko00564   Glycerophospholipid metabolism rko00565   Ether lipid metabolism rko00572   Arabinogalactan biosynthesis - Mycobacterium rko00592   alpha-Linolenic acid metabolism rko00600   Sphingolipid metabolism rko00620   Pyruvate metabolism rko00621   Dioxin degradation rko00622   Xylene degradation rko00623   Toluene degradation rko00624   Polycyclic aromatic hydrocarbon degradation rko00625   Chloroalkane and chloroalkene degradation rko00626   Naphthalene degradation rko00627   Aminobenzoate degradation rko00630   Glyoxylate and dicarboxylate metabolism rko00633   Nitrotoluene degradation rko00640   Propanoate metabolism rko00643   Styrene degradation rko00650   Butanoate metabolism rko00660   C5-Branched dibasic acid metabolism rko00670   One carbon pool by folate rko00680   Methane metabolism rko00710   Carbon fixation by Calvin cycle rko00720   Other carbon fixation pathways rko00730   Thiamine metabolism rko00740   Riboflavin metabolism rko00750   Vitamin B6 metabolism rko00760   Nicotinate and nicotinamide metabolism rko00770   Pantothenate and CoA biosynthesis rko00780   Biotin metabolism rko00785   Lipoic acid metabolism rko00790   Folate biosynthesis rko00791   Atrazine degradation rko00860   Porphyrin metabolism rko00900   Terpenoid backbone biosynthesis rko00903   Limonene degradation rko00906   Carotenoid biosynthesis rko00907   Pinene, camphor and geraniol degradation rko00910   Nitrogen metabolism rko00920   Sulfur metabolism rko00930   Caprolactam degradation rko00946   Degradation of flavonoids rko00984   Steroid degradation rko00999   Biosynthesis of various plant secondary metabolites rko01040   Biosynthesis of unsaturated fatty acids rko01051   Biosynthesis of ansamycins rko01053   Biosynthesis of siderophore group nonribosomal peptides rko01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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